RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
LINC00393-202ENST00000452852 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
LINC00393-202ENST00000452852 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
LINC00393-202ENST00000452852 NLRP6P59044 892 aa10.52□□□□□ -0.73
LINC00393-202ENST00000452852 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
LINC00393-202ENST00000452852 FBXO22Q8NEZ5 403 aa10.52□□□□□ -0.73
LINC00393-202ENST00000452852 MS4A4AQ96JQ5 239 aa10.52□□□□□ -0.73
LINC00393-202ENST00000452852 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
LINC00393-202ENST00000452852 ERBB3P21860 1342 aa10.46□□□□□ -0.73
LINC00393-202ENST00000452852 ZNF710Q8N1W2 664 aa10.45□□□□□ -0.74
LINC00393-202ENST00000452852 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
LINC00393-202ENST00000452852 BOLA1Q9Y3E2 137 aa10.43□□□□□ -0.74
LINC00393-202ENST00000452852 G3V3G9 751 aa10.41□□□□□ -0.74
LINC00393-202ENST00000452852 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
LINC00393-202ENST00000452852 PPP1R37O75864 691 aa10.41□□□□□ -0.74
LINC00393-202ENST00000452852 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
LINC00393-202ENST00000452852 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
LINC00393-202ENST00000452852 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
LINC00393-202ENST00000452852 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
LINC00393-202ENST00000452852 PTGER2P43116 358 aa10.37□□□□□ -0.75
LINC00393-202ENST00000452852 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.37□□□□□ -0.75
LINC00393-202ENST00000452852 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
LINC00393-202ENST00000452852 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
LINC00393-202ENST00000452852 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
LINC00393-202ENST00000452852 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
LINC00393-202ENST00000452852 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
LINC00393-202ENST00000452852 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
LINC00393-202ENST00000452852 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
LINC00393-202ENST00000452852 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
LINC00393-202ENST00000452852 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
LINC00393-202ENST00000452852 ANKRD13DQ6ZTN6 518 aa10.21□□□□□ -0.77
LINC00393-202ENST00000452852 C2orf72A6NCS6 295 aa10.19□□□□□ -0.78
LINC00393-202ENST00000452852 KIF3CO14782 793 aa10.19□□□□□ -0.78
LINC00393-202ENST00000452852 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
LINC00393-202ENST00000452852 TMC2Q8TDI7 906 aa10.18□□□□□ -0.78
LINC00393-202ENST00000452852 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
LINC00393-202ENST00000452852 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
LINC00393-202ENST00000452852 CADPS2Q86UW7 1296 aa10.17□□□□□ -0.78
LINC00393-202ENST00000452852 NCKAP5LQ9HCH0 1330 aa10.14□□□□□ -0.79
LINC00393-202ENST00000452852 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
LINC00393-202ENST00000452852 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
LINC00393-202ENST00000452852 PDE4AP27815 886 aa10.12□□□□□ -0.79
LINC00393-202ENST00000452852 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
LINC00393-202ENST00000452852 DSG2Q14126 1118 aa10.1□□□□□ -0.79
LINC00393-202ENST00000452852 FOXK1P85037 733 aa10.09□□□□□ -0.79
LINC00393-202ENST00000452852 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
LINC00393-202ENST00000452852 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
LINC00393-202ENST00000452852 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
LINC00393-202ENST00000452852 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00393-202ENST00000452852 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
LINC00393-202ENST00000452852 MFSD10Q14728 455 aa10.05□□□□□ -0.8
LINC00393-202ENST00000452852 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
LINC00393-202ENST00000452852 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
LINC00393-202ENST00000452852 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
LINC00393-202ENST00000452852 SLC34A2O95436 690 aa10□□□□□ -0.81
LINC00393-202ENST00000452852 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
LINC00393-202ENST00000452852 ARSIQ5FYB1 569 aa9.97□□□□□ -0.81
LINC00393-202ENST00000452852 PBX2P40425 430 aa9.96□□□□□ -0.82
LINC00393-202ENST00000452852 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC00393-202ENST00000452852 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
LINC00393-202ENST00000452852 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
LINC00393-202ENST00000452852 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
LINC00393-202ENST00000452852 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00393-202ENST00000452852 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
LINC00393-202ENST00000452852 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
LINC00393-202ENST00000452852 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
LINC00393-202ENST00000452852 TBC1D12O60347 775 aa9.91□□□□□ -0.82
LINC00393-202ENST00000452852 NUDT7P0C024 238 aa9.91□□□□□ -0.82
LINC00393-202ENST00000452852 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
LINC00393-202ENST00000452852 E2F4Q16254 413 aa9.89□□□□□ -0.83
LINC00393-202ENST00000452852 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
LINC00393-202ENST00000452852 RGS20O76081 388 aa9.87□□□□□ -0.83
LINC00393-202ENST00000452852 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
LINC00393-202ENST00000452852 KDM4FA0A1W2PPD8 638 aa9.86□□□□□ -0.83
LINC00393-202ENST00000452852 DPYSL4O14531 572 aa9.85□□□□□ -0.83
LINC00393-202ENST00000452852 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
LINC00393-202ENST00000452852 LHX6Q9UPM6 363 aa9.84□□□□□ -0.83
LINC00393-202ENST00000452852 EVI5O60447 810 aa9.83□□□□□ -0.84
LINC00393-202ENST00000452852 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
LINC00393-202ENST00000452852 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
LINC00393-202ENST00000452852 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
LINC00393-202ENST00000452852 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
LINC00393-202ENST00000452852 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
LINC00393-202ENST00000452852 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
LINC00393-202ENST00000452852 PDIA6Q15084 440 aa9.75□□□□□ -0.85
LINC00393-202ENST00000452852 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
LINC00393-202ENST00000452852 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
LINC00393-202ENST00000452852 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
LINC00393-202ENST00000452852 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
LINC00393-202ENST00000452852 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
LINC00393-202ENST00000452852 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
LINC00393-202ENST00000452852 FOSBP53539 338 aa9.72□□□□□ -0.85
LINC00393-202ENST00000452852 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
LINC00393-202ENST00000452852 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
LINC00393-202ENST00000452852 TK2O00142 265 aa9.71□□□□□ -0.86
LINC00393-202ENST00000452852 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
LINC00393-202ENST00000452852 DDX12PQ92771 950 aa9.7□□□□□ -0.86
LINC00393-202ENST00000452852 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
LINC00393-202ENST00000452852 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
LINC00393-202ENST00000452852 PHF14O94880 888 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms