RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CLSTN1O94985 981 aa6.9□□□□□ -1.31
EPHA3-202ENST00000452448 CHRM1P11229 460 aaPredicted RBP6.9□□□□□ -1.31
EPHA3-202ENST00000452448 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
EPHA3-202ENST00000452448 NKX1-1Q15270 411 aaPredicted RBP6.88□□□□□ -1.31
EPHA3-202ENST00000452448 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
EPHA3-202ENST00000452448 EIF4G1Q04637 1599 aaKnown RBP6.88□□□□□ -1.31
EPHA3-202ENST00000452448 RAD21O60216 631 aa6.87□□□□□ -1.31
EPHA3-202ENST00000452448 FTSJ3Q8IY81 847 aaKnown RBP6.87□□□□□ -1.31
EPHA3-202ENST00000452448 IL27Q8NEV9 243 aa6.87□□□□□ -1.31
EPHA3-202ENST00000452448 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
EPHA3-202ENST00000452448 MNX1P50219 401 aaPredicted RBP6.86□□□□□ -1.31
EPHA3-202ENST00000452448 PSMD1Q99460 953 aa6.86□□□□□ -1.31
EPHA3-202ENST00000452448 CHADLQ6NUI6 762 aa6.85□□□□□ -1.31
EPHA3-202ENST00000452448 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
EPHA3-202ENST00000452448 CERS3Q8IU89 383 aa6.85□□□□□ -1.31
EPHA3-202ENST00000452448 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
EPHA3-202ENST00000452448 ZNF526Q8TF50 670 aaPredicted RBP6.83□□□□□ -1.32
EPHA3-202ENST00000452448 PLCD4Q9BRC7 762 aa6.83□□□□□ -1.32
EPHA3-202ENST00000452448 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
EPHA3-202ENST00000452448 MTMR7Q9Y216 660 aa6.83□□□□□ -1.32
EPHA3-202ENST00000452448 NUBP1P53384 320 aa6.83□□□□□ -1.32
EPHA3-202ENST00000452448 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
EPHA3-202ENST00000452448 FOXD4L5Q5VV16 416 aaPredicted RBP6.82□□□□□ -1.32
EPHA3-202ENST00000452448 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
EPHA3-202ENST00000452448 FOXD4L4Q8WXT5 416 aaPredicted RBP6.82□□□□□ -1.32
EPHA3-202ENST00000452448 PRDM16Q9HAZ2 1276 aa6.82□□□□□ -1.32
EPHA3-202ENST00000452448 DCAF1Q9Y4B6 1507 aa6.82□□□□□ -1.32
EPHA3-202ENST00000452448 LMOD2Q6P5Q4 547 aa6.82□□□□□ -1.32
EPHA3-202ENST00000452448 CREBZFQ9NS37 354 aa6.82□□□□□ -1.32
EPHA3-202ENST00000452448 APBB1O00213 710 aa6.81□□□□□ -1.32
EPHA3-202ENST00000452448 CANXP27824 592 aaKnown RBP6.81□□□□□ -1.32
EPHA3-202ENST00000452448 FAM43BQ6ZT52 329 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-202ENST00000452448 PYGBP11216 843 aa6.81□□□□□ -1.32
EPHA3-202ENST00000452448 REM2Q8IYK8 340 aaPredicted RBP6.8□□□□□ -1.32
EPHA3-202ENST00000452448 TRIM41Q8WV44 630 aa6.79□□□□□ -1.32
EPHA3-202ENST00000452448 STAG3Q9UJ98 1225 aa6.79□□□□□ -1.32
EPHA3-202ENST00000452448 GRIPAP1Q4V328 841 aa6.78□□□□□ -1.32
EPHA3-202ENST00000452448 STAC3Q96MF2 364 aa6.78□□□□□ -1.32
EPHA3-202ENST00000452448 ERCC6Q03468 1493 aa6.78□□□□□ -1.32
EPHA3-202ENST00000452448 PITPNM1O00562 1244 aa6.78□□□□□ -1.32
EPHA3-202ENST00000452448 CNGB1Q14028 1251 aaPredicted RBP6.78□□□□□ -1.32
EPHA3-202ENST00000452448 RTL5Q5HYW3 569 aaPredicted RBP6.77□□□□□ -1.33
EPHA3-202ENST00000452448 ARID4BQ4LE39 1312 aaPredicted RBP6.76□□□□□ -1.33
EPHA3-202ENST00000452448 PTMSP20962 102 aa6.76□□□□□ -1.33
EPHA3-202ENST00000452448 DCAF8Q5TAQ9 597 aa6.76□□□□□ -1.33
EPHA3-202ENST00000452448 SLC24A3Q9HC58 644 aa6.76□□□□□ -1.33
EPHA3-202ENST00000452448 FAM193AP78312 1265 aa6.75□□□□□ -1.33
EPHA3-202ENST00000452448 PATL2C9JE40 543 aaKnown RBP6.74□□□□□ -1.33
EPHA3-202ENST00000452448 PTMAP06454 111 aaKnown RBP6.74□□□□□ -1.33
EPHA3-202ENST00000452448 AEBP1Q8IUX7 1158 aa6.74□□□□□ -1.33
EPHA3-202ENST00000452448 USP35Q9P2H5 1018 aa6.74□□□□□ -1.33
EPHA3-202ENST00000452448 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
EPHA3-202ENST00000452448 MCCP23508 829 aa6.73□□□□□ -1.33
EPHA3-202ENST00000452448 CC2D2BQ6DHV5 1058 aa6.73□□□□□ -1.33
EPHA3-202ENST00000452448 STK25O00506 426 aa6.72□□□□□ -1.33
EPHA3-202ENST00000452448 OS9Q13438 667 aaPredicted RBP6.72□□□□□ -1.33
EPHA3-202ENST00000452448 YTHDC1Q96MU7 727 aaKnown RBP6.72□□□□□ -1.33
EPHA3-202ENST00000452448 CCDC82Q8N4S0 544 aa6.71□□□□□ -1.34
EPHA3-202ENST00000452448 TSPYL2Q9H2G4 693 aaPredicted RBP6.71□□□□□ -1.34
EPHA3-202ENST00000452448 ANAPC15P60006 121 aa6.71□□□□□ -1.34
EPHA3-202ENST00000452448 GTPBP6O43824 516 aaPredicted RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 SUPT16HQ9Y5B9 1047 aaKnown RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 NEFMP07197 916 aa6.7□□□□□ -1.34
EPHA3-202ENST00000452448 MFAP1P55081 439 aaKnown RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 TMCO4Q5TGY1 634 aa6.7□□□□□ -1.34
EPHA3-202ENST00000452448 FAM177A1Q8N128 213 aaPredicted RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 RBM19Q9Y4C8 960 aaKnown RBP6.7□□□□□ -1.34
EPHA3-202ENST00000452448 SETQ01105 290 aaPredicted RBP6.69□□□□□ -1.34
EPHA3-202ENST00000452448 PRDM4Q9UKN5 801 aa6.69□□□□□ -1.34
EPHA3-202ENST00000452448 PCDHB8Q9UN66 801 aa6.69□□□□□ -1.34
EPHA3-202ENST00000452448 PCDHB13Q9Y5F0 798 aa6.69□□□□□ -1.34
EPHA3-202ENST00000452448 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-202ENST00000452448 RRP9O43818 475 aaKnown RBP6.68□□□□□ -1.34
EPHA3-202ENST00000452448 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-202ENST00000452448 GPATCH11Q8N954 259 aa6.68□□□□□ -1.34
EPHA3-202ENST00000452448 ZC3H15Q8WU90 426 aaKnown RBP6.68□□□□□ -1.34
EPHA3-202ENST00000452448 CCDC27Q2M243 656 aa6.68□□□□□ -1.34
EPHA3-202ENST00000452448 CADPS2Q86UW7 1296 aa6.68□□□□□ -1.34
EPHA3-202ENST00000452448 HS6ST3Q8IZP7 471 aa6.67□□□□□ -1.34
EPHA3-202ENST00000452448 DNAJC2Q99543 621 aaKnown RBP6.67□□□□□ -1.34
EPHA3-202ENST00000452448 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
EPHA3-202ENST00000452448 MKRN3Q13064 507 aaKnown RBP6.66□□□□□ -1.34
EPHA3-202ENST00000452448 KDM4AO75164 1064 aa6.66□□□□□ -1.34
EPHA3-202ENST00000452448 ZNF830Q96NB3 372 aaPredicted RBP6.66□□□□□ -1.34
EPHA3-202ENST00000452448 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
EPHA3-202ENST00000452448 RIOK3O14730 519 aaKnown RBP6.65□□□□□ -1.34
EPHA3-202ENST00000452448 CLGNO14967 610 aa6.65□□□□□ -1.34
EPHA3-202ENST00000452448 RGS3P49796 1198 aa6.65□□□□□ -1.34
EPHA3-202ENST00000452448 AKT1S1Q96B36 256 aa6.65□□□□□ -1.34
EPHA3-202ENST00000452448 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
EPHA3-202ENST00000452448 SOX12O15370 315 aa6.65□□□□□ -1.35
EPHA3-202ENST00000452448 CALD1Q05682 793 aaKnown RBP6.65□□□□□ -1.35
EPHA3-202ENST00000452448 GPBP1L1Q9HC44 474 aaPredicted RBP6.65□□□□□ -1.35
EPHA3-202ENST00000452448 E9PSI1 815 aa6.64□□□□□ -1.35
EPHA3-202ENST00000452448 MAFGO15525 162 aa6.63□□□□□ -1.35
EPHA3-202ENST00000452448 ZNF622Q969S3 477 aaKnown RBP eCLIP6.63□□□□□ -1.35
EPHA3-202ENST00000452448 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
EPHA3-202ENST00000452448 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
EPHA3-202ENST00000452448 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms