RNA–Protein interactions for RNA: ENST00000452421.5

TMEM59-208, Transcript of transmembrane protein 59, human

TSL 5

Gene TMEM59, Length 1,074 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM59-208	ENST00000452421	CDC42BPA	Q5VT25	1732 aa		28.85	■■■□□ 2.21
TMEM59-208	ENST00000452421	ARHGAP5	Q13017	1502 aa		28.84	■■■□□ 2.21
TMEM59-208	ENST00000452421	RAPGEF3	O95398	923 aa		28.84	■■■□□ 2.21
TMEM59-208	ENST00000452421	MTUS2	Q5JR59	1369 aa		28.82	■■■□□ 2.2
TMEM59-208	ENST00000452421	ZMYM4	Q5VZL5	1548 aa		28.82	■■■□□ 2.2
TMEM59-208	ENST00000452421	TIAM1	Q13009	1591 aa		28.81	■■■□□ 2.2
TMEM59-208	ENST00000452421	POGZ	Q7Z3K3	1410 aa		28.78	■■■□□ 2.2
TMEM59-208	ENST00000452421	SCAPER	Q9BY12	1400 aa		28.78	■■■□□ 2.2
TMEM59-208	ENST00000452421	MAP3K1	Q13233	1512 aa		28.76	■■■□□ 2.19
TMEM59-208	ENST00000452421	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.76	■■■□□ 2.19
TMEM59-208	ENST00000452421	ARHGEF40	Q8TER5	1519 aa		28.74	■■■□□ 2.19
TMEM59-208	ENST00000452421	ILDR1	Q86SU0	546 aa	Predicted RBP	28.74	■■■□□ 2.19
TMEM59-208	ENST00000452421	MAGI2	Q86UL8	1455 aa		28.73	■■■□□ 2.19
TMEM59-208	ENST00000452421	ABCC1	P33527	1531 aa		28.73	■■■□□ 2.19
TMEM59-208	ENST00000452421	KDM4F	A0A1W2PPD8	638 aa		28.72	■■■□□ 2.19
TMEM59-208	ENST00000452421	ZNF518A	Q6AHZ1	1483 aa		28.7	■■■□□ 2.18
TMEM59-208	ENST00000452421	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.69	■■■□□ 2.18
TMEM59-208	ENST00000452421	KDM5C	P41229	1560 aa		28.69	■■■□□ 2.18
TMEM59-208	ENST00000452421	ITSN2	Q9NZM3	1697 aa		28.69	■■■□□ 2.18
TMEM59-208	ENST00000452421	CCNB3	Q8WWL7	1395 aa		28.68	■■■□□ 2.18
TMEM59-208	ENST00000452421	ZFYVE16	Q7Z3T8	1539 aa		28.67	■■■□□ 2.18
TMEM59-208	ENST00000452421	SAMD9L	Q8IVG5	1584 aa		28.67	■■■□□ 2.18
TMEM59-208	ENST00000452421	LRRC9	Q6ZRR7	1453 aa		28.66	■■■□□ 2.18
TMEM59-208	ENST00000452421	ARHGEF12	Q9NZN5	1544 aa		28.64	■■■□□ 2.18
TMEM59-208	ENST00000452421	NCOA2	Q15596	1464 aa		28.63	■■■□□ 2.17
TMEM59-208	ENST00000452421	YEATS2	Q9ULM3	1422 aa		28.61	■■■□□ 2.17
TMEM59-208	ENST00000452421	PLEKHH2	Q8IVE3	1493 aa		28.6	■■■□□ 2.17
TMEM59-208	ENST00000452421	HECW2	Q9P2P5	1572 aa		28.59	■■■□□ 2.17
TMEM59-208	ENST00000452421	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.59	■■■□□ 2.17
TMEM59-208	ENST00000452421	KIAA1107	Q9UPP5	1409 aa		28.59	■■■□□ 2.17
TMEM59-208	ENST00000452421	TRAPPC8	Q9Y2L5	1435 aa		28.58	■■■□□ 2.17
TMEM59-208	ENST00000452421	MLH3	Q9UHC1	1453 aa		28.57	■■■□□ 2.16
TMEM59-208	ENST00000452421	SYCP2	Q9BX26	1530 aa		28.57	■■■□□ 2.16
TMEM59-208	ENST00000452421	AFAP1	Q8N556	730 aa		28.56	■■■□□ 2.16
TMEM59-208	ENST00000452421	BCORL1	Q5H9F3	1711 aa		28.54	■■■□□ 2.16
TMEM59-208	ENST00000452421	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.53	■■■□□ 2.16
TMEM59-208	ENST00000452421	ATP10A	O60312	1499 aa		28.53	■■■□□ 2.16
TMEM59-208	ENST00000452421	ADAMTSL3	P82987	1691 aa		28.52	■■■□□ 2.16
TMEM59-208	ENST00000452421	KANK4	Q5T7N3	995 aa	Predicted RBP	28.52	■■■□□ 2.16
TMEM59-208	ENST00000452421	SIGLEC1	Q9BZZ2	1709 aa		28.52	■■■□□ 2.16
TMEM59-208	ENST00000452421	C9orf84	Q5VXU9	1444 aa		28.5	■■■□□ 2.15
TMEM59-208	ENST00000452421	RERE	Q9P2R6	1566 aa		28.5	■■■□□ 2.15
TMEM59-208	ENST00000452421	DIP2C	Q9Y2E4	1556 aa		28.5	■■■□□ 2.15
TMEM59-208	ENST00000452421	KIDINS220	Q9ULH0	1771 aa		28.49	■■■□□ 2.15
TMEM59-208	ENST00000452421	ABCA6	Q8N139	1617 aa		28.48	■■■□□ 2.15
TMEM59-208	ENST00000452421	APLP2	Q06481	763 aa		28.47	■■■□□ 2.15
TMEM59-208	ENST00000452421	MBD5	Q9P267	1494 aa		28.45	■■■□□ 2.14
TMEM59-208	ENST00000452421	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.44	■■■□□ 2.14
TMEM59-208	ENST00000452421	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.43	■■■□□ 2.14
TMEM59-208	ENST00000452421	INO80	Q9ULG1	1556 aa	Predicted RBP	28.42	■■■□□ 2.14
TMEM59-208	ENST00000452421	CAMSAP2	Q08AD1	1489 aa		28.42	■■■□□ 2.14
TMEM59-208	ENST00000452421	ZNF644	Q9H582	1327 aa	Predicted RBP	28.42	■■■□□ 2.14
TMEM59-208	ENST00000452421	MADD	Q8WXG6	1647 aa		28.4	■■■□□ 2.14
TMEM59-208	ENST00000452421	ATP7A	Q04656	1500 aa		28.39	■■■□□ 2.14
TMEM59-208	ENST00000452421	MYOM3	Q5VTT5	1437 aa		28.39	■■■□□ 2.14
TMEM59-208	ENST00000452421	MIA2	Q96PC5	1412 aa		28.38	■■■□□ 2.13
TMEM59-208	ENST00000452421	SPAG9	O60271	1321 aa	Known RBP	28.38	■■■□□ 2.13
TMEM59-208	ENST00000452421	MYT1L	Q9UL68	1186 aa		28.37	■■■□□ 2.13
TMEM59-208	ENST00000452421	AGL	P35573	1532 aa		28.37	■■■□□ 2.13
TMEM59-208	ENST00000452421	ARHGEF5	Q12774	1597 aa		28.37	■■■□□ 2.13
TMEM59-208	ENST00000452421	CCDC141	Q6ZP82	1450 aa		28.34	■■■□□ 2.13
TMEM59-208	ENST00000452421	RSPH4A	Q5TD94	716 aa		28.33	■■■□□ 2.13
TMEM59-208	ENST00000452421	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.33	■■■□□ 2.13
TMEM59-208	ENST00000452421	PTPRM	P28827	1452 aa		28.33	■■■□□ 2.13
TMEM59-208	ENST00000452421	RIMS1	Q86UR5	1692 aa	Known RBP	28.3	■■■□□ 2.12
TMEM59-208	ENST00000452421	FER1L4	A9Z1Z3	1794 aa		28.29	■■■□□ 2.12
TMEM59-208	ENST00000452421	ADGB	Q8N7X0	1667 aa		28.29	■■■□□ 2.12
TMEM59-208	ENST00000452421	PLXNC1	O60486	1568 aa		28.28	■■■□□ 2.12
TMEM59-208	ENST00000452421	A2M	P01023	1474 aa		28.23	■■■□□ 2.11
TMEM59-208	ENST00000452421	PTPN23	Q9H3S7	1636 aa		28.23	■■■□□ 2.11
TMEM59-208	ENST00000452421	MAST1	Q9Y2H9	1570 aa		28.23	■■■□□ 2.11
TMEM59-208	ENST00000452421	MLEC	Q14165	292 aa		28.22	■■■□□ 2.11
TMEM59-208	ENST00000452421	FGD6	Q6ZV73	1430 aa		28.21	■■■□□ 2.11
TMEM59-208	ENST00000452421	TCOF1	Q13428	1488 aa	Known RBP	28.21	■■■□□ 2.11
TMEM59-208	ENST00000452421	TSPY4	P0CV99	314 aa		28.15	■■■□□ 2.1
TMEM59-208	ENST00000452421	TSPY10	P0CW01	314 aa		28.15	■■■□□ 2.1
TMEM59-208	ENST00000452421	CROCC2	H7BZ55	1655 aa		28.14	■■■□□ 2.1
TMEM59-208	ENST00000452421	DHX29	Q7Z478	1369 aa	Known RBP	28.13	■■■□□ 2.09
TMEM59-208	ENST00000452421	SHANK2	Q9UPX8	1470 aa		28.12	■■■□□ 2.09
TMEM59-208	ENST00000452421	DNMT1	P26358	1616 aa	Known RBP	28.11	■■■□□ 2.09
TMEM59-208	ENST00000452421	ABCC5	O15440	1437 aa		28.09	■■■□□ 2.09
TMEM59-208	ENST00000452421	CNTLN	Q9NXG0	1405 aa		28.09	■■■□□ 2.09
TMEM59-208	ENST00000452421	MROH2A	A6NES4	1674 aa		28.07	■■■□□ 2.08
TMEM59-208	ENST00000452421	DAPK1	P53355	1430 aa		28.06	■■■□□ 2.08
TMEM59-208	ENST00000452421	C3	P01024	1663 aa		28.04	■■■□□ 2.08
TMEM59-208	ENST00000452421	PPP6R1	Q9UPN7	881 aa		28.02	■■■□□ 2.08
TMEM59-208	ENST00000452421	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.01	■■■□□ 2.07
TMEM59-208	ENST00000452421	ESF1	Q9H501	851 aa	Known RBP	28.01	■■■□□ 2.07
TMEM59-208	ENST00000452421	FAM135A	Q9P2D6	1515 aa		28.01	■■■□□ 2.07
TMEM59-208	ENST00000452421	DUOX2	Q9NRD8	1548 aa		27.98	■■■□□ 2.07
TMEM59-208	ENST00000452421	CLTC	Q00610	1675 aa	Known RBP	27.98	■■■□□ 2.07
TMEM59-208	ENST00000452421	LMTK3	Q96Q04	1460 aa		27.98	■■■□□ 2.07
TMEM59-208	ENST00000452421	RNF17	Q9BXT8	1623 aa	Known RBP	27.96	■■■□□ 2.07
TMEM59-208	ENST00000452421	SETD1B	Q9UPS6	1966 aa	Known RBP	27.95	■■■□□ 2.07
TMEM59-208	ENST00000452421	PREX1	Q8TCU6	1659 aa		27.95	■■■□□ 2.07
TMEM59-208	ENST00000452421	GGT6	Q6P531	493 aa		27.95	■■■□□ 2.06
TMEM59-208	ENST00000452421	KIF3B	O15066	747 aa		27.94	■■■□□ 2.06
TMEM59-208	ENST00000452421	CEBPA	P49715	358 aa	Predicted RBP	27.94	■■■□□ 2.06
TMEM59-208	ENST00000452421	ADGRL2	O95490	1459 aa		27.92	■■■□□ 2.06
TMEM59-208	ENST00000452421	KIF15	Q9NS87	1388 aa		27.92	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms