RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 CDAN1Q8IWY9 1227 aa10.78□□□□□ -0.68
PMS1-218ENST00000452382 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
PMS1-218ENST00000452382 KIF3CO14782 793 aa10.71□□□□□ -0.69
PMS1-218ENST00000452382 C2orf72A6NCS6 295 aa10.7□□□□□ -0.7
PMS1-218ENST00000452382 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
PMS1-218ENST00000452382 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
PMS1-218ENST00000452382 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
PMS1-218ENST00000452382 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
PMS1-218ENST00000452382 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
PMS1-218ENST00000452382 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
PMS1-218ENST00000452382 TMC2Q8TDI7 906 aa10.64□□□□□ -0.71
PMS1-218ENST00000452382 EMP3P54852 163 aa10.62□□□□□ -0.71
PMS1-218ENST00000452382 HOXB1P14653 301 aaPredicted RBP10.61□□□□□ -0.71
PMS1-218ENST00000452382 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
PMS1-218ENST00000452382 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
PMS1-218ENST00000452382 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
PMS1-218ENST00000452382 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
PMS1-218ENST00000452382 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
PMS1-218ENST00000452382 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
PMS1-218ENST00000452382 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
PMS1-218ENST00000452382 FOXK1P85037 733 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 DSG2Q14126 1118 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 HS3ST6Q96QI5 342 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
PMS1-218ENST00000452382 KHSRPQ92945 711 aaKnown RBP eCLIP10.54□□□□□ -0.72
PMS1-218ENST00000452382 MMRN1Q13201 1228 aa10.53□□□□□ -0.72
PMS1-218ENST00000452382 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
PMS1-218ENST00000452382 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
PMS1-218ENST00000452382 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
PMS1-218ENST00000452382 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
PMS1-218ENST00000452382 SLC34A2O95436 690 aa10.51□□□□□ -0.73
PMS1-218ENST00000452382 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
PMS1-218ENST00000452382 ERBB3P21860 1342 aa10.5□□□□□ -0.73
PMS1-218ENST00000452382 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
PMS1-218ENST00000452382 NUDT7P0C024 238 aa10.47□□□□□ -0.73
PMS1-218ENST00000452382 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
PMS1-218ENST00000452382 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
PMS1-218ENST00000452382 PDE4AP27815 886 aa10.46□□□□□ -0.73
PMS1-218ENST00000452382 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
PMS1-218ENST00000452382 PAXIP1Q6ZW49 1069 aaPredicted RBP10.45□□□□□ -0.74
PMS1-218ENST00000452382 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
PMS1-218ENST00000452382 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
PMS1-218ENST00000452382 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
PMS1-218ENST00000452382 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
PMS1-218ENST00000452382 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
PMS1-218ENST00000452382 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
PMS1-218ENST00000452382 MFSD10Q14728 455 aa10.42□□□□□ -0.74
PMS1-218ENST00000452382 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
PMS1-218ENST00000452382 KDM4FA0A1W2PPD8 638 aa10.4□□□□□ -0.74
PMS1-218ENST00000452382 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
PMS1-218ENST00000452382 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
PMS1-218ENST00000452382 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
PMS1-218ENST00000452382 ZNF687Q8N1G0 1237 aa10.37□□□□□ -0.75
PMS1-218ENST00000452382 TBC1D12O60347 775 aa10.34□□□□□ -0.75
PMS1-218ENST00000452382 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
PMS1-218ENST00000452382 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
PMS1-218ENST00000452382 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
PMS1-218ENST00000452382 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
PMS1-218ENST00000452382 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
PMS1-218ENST00000452382 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
PMS1-218ENST00000452382 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
PMS1-218ENST00000452382 EVI5O60447 810 aa10.26□□□□□ -0.77
PMS1-218ENST00000452382 MAP3K9P80192 1104 aa10.25□□□□□ -0.77
PMS1-218ENST00000452382 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
PMS1-218ENST00000452382 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
PMS1-218ENST00000452382 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
PMS1-218ENST00000452382 PBX2P40425 430 aa10.22□□□□□ -0.77
PMS1-218ENST00000452382 DPYSL4O14531 572 aa10.21□□□□□ -0.77
PMS1-218ENST00000452382 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
PMS1-218ENST00000452382 ZNF454Q8N9F8 522 aa10.21□□□□□ -0.77
PMS1-218ENST00000452382 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
PMS1-218ENST00000452382 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
PMS1-218ENST00000452382 FOSBP53539 338 aa10.19□□□□□ -0.78
PMS1-218ENST00000452382 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
PMS1-218ENST00000452382 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
PMS1-218ENST00000452382 PSEN2P49810 448 aa10.18□□□□□ -0.78
PMS1-218ENST00000452382 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
PMS1-218ENST00000452382 E2F4Q16254 413 aa10.16□□□□□ -0.78
PMS1-218ENST00000452382 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
PMS1-218ENST00000452382 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
PMS1-218ENST00000452382 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
PMS1-218ENST00000452382 BCL2L12Q9HB09 334 aa10.14□□□□□ -0.79
PMS1-218ENST00000452382 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
PMS1-218ENST00000452382 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
PMS1-218ENST00000452382 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
PMS1-218ENST00000452382 PDIA6Q15084 440 aa10.11□□□□□ -0.79
PMS1-218ENST00000452382 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
PMS1-218ENST00000452382 MYT1LQ9UL68 1186 aa10.1□□□□□ -0.79
PMS1-218ENST00000452382 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
PMS1-218ENST00000452382 PHF14O94880 888 aa10.08□□□□□ -0.8
PMS1-218ENST00000452382 PTPREP23469 700 aa10.08□□□□□ -0.8
PMS1-218ENST00000452382 PTGER2P43116 358 aa10.08□□□□□ -0.8
PMS1-218ENST00000452382 DDX12PQ92771 950 aa10.08□□□□□ -0.8
PMS1-218ENST00000452382 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
PMS1-218ENST00000452382 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
PMS1-218ENST00000452382 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
PMS1-218ENST00000452382 TK2O00142 265 aa10.06□□□□□ -0.8
PMS1-218ENST00000452382 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms