RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
GTF3C3-207ENST00000451088 C2orf72A6NCS6 295 aa11.86□□□□□ -0.51
GTF3C3-207ENST00000451088 POTEMA6NI47 508 aa11.86□□□□□ -0.51
GTF3C3-207ENST00000451088 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
GTF3C3-207ENST00000451088 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
GTF3C3-207ENST00000451088 TMC2Q8TDI7 906 aa11.82□□□□□ -0.52
GTF3C3-207ENST00000451088 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
GTF3C3-207ENST00000451088 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
GTF3C3-207ENST00000451088 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
GTF3C3-207ENST00000451088 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
GTF3C3-207ENST00000451088 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
GTF3C3-207ENST00000451088 FOXK1P85037 733 aa11.76□□□□□ -0.53
GTF3C3-207ENST00000451088 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
GTF3C3-207ENST00000451088 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
GTF3C3-207ENST00000451088 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
GTF3C3-207ENST00000451088 SLC34A2O95436 690 aa11.73□□□□□ -0.53
GTF3C3-207ENST00000451088 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
GTF3C3-207ENST00000451088 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
GTF3C3-207ENST00000451088 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
GTF3C3-207ENST00000451088 DSG2Q14126 1118 aa11.72□□□□□ -0.53
GTF3C3-207ENST00000451088 PDE4AP27815 886 aa11.7□□□□□ -0.54
GTF3C3-207ENST00000451088 EMP3P54852 163 aa11.7□□□□□ -0.54
GTF3C3-207ENST00000451088 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
GTF3C3-207ENST00000451088 PCDH10Q9P2E7 1040 aa11.69□□□□□ -0.54
GTF3C3-207ENST00000451088 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
GTF3C3-207ENST00000451088 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-207ENST00000451088 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
GTF3C3-207ENST00000451088 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
GTF3C3-207ENST00000451088 MFSD10Q14728 455 aa11.64□□□□□ -0.55
GTF3C3-207ENST00000451088 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
GTF3C3-207ENST00000451088 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
GTF3C3-207ENST00000451088 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
GTF3C3-207ENST00000451088 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
GTF3C3-207ENST00000451088 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
GTF3C3-207ENST00000451088 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
GTF3C3-207ENST00000451088 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
GTF3C3-207ENST00000451088 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
GTF3C3-207ENST00000451088 KHSRPQ92945 711 aaKnown RBP eCLIP11.62□□□□□ -0.55
GTF3C3-207ENST00000451088 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
GTF3C3-207ENST00000451088 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
GTF3C3-207ENST00000451088 ERBB3P21860 1342 aa11.58□□□□□ -0.56
GTF3C3-207ENST00000451088 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
GTF3C3-207ENST00000451088 NUDT7P0C024 238 aa11.56□□□□□ -0.56
GTF3C3-207ENST00000451088 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
GTF3C3-207ENST00000451088 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
GTF3C3-207ENST00000451088 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
GTF3C3-207ENST00000451088 TBC1D12O60347 775 aa11.53□□□□□ -0.56
GTF3C3-207ENST00000451088 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
GTF3C3-207ENST00000451088 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
GTF3C3-207ENST00000451088 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
GTF3C3-207ENST00000451088 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF3C3-207ENST00000451088 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
GTF3C3-207ENST00000451088 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
GTF3C3-207ENST00000451088 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
GTF3C3-207ENST00000451088 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
GTF3C3-207ENST00000451088 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
GTF3C3-207ENST00000451088 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
GTF3C3-207ENST00000451088 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
GTF3C3-207ENST00000451088 EVI5O60447 810 aa11.4□□□□□ -0.58
GTF3C3-207ENST00000451088 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
GTF3C3-207ENST00000451088 WDR70Q9NW82 654 aa11.37□□□□□ -0.59
GTF3C3-207ENST00000451088 PBX2P40425 430 aa11.36□□□□□ -0.59
GTF3C3-207ENST00000451088 E2F4Q16254 413 aa11.36□□□□□ -0.59
GTF3C3-207ENST00000451088 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
GTF3C3-207ENST00000451088 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
GTF3C3-207ENST00000451088 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
GTF3C3-207ENST00000451088 DPYSL4O14531 572 aa11.34□□□□□ -0.59
GTF3C3-207ENST00000451088 SPNS2Q8IVW8 549 aa11.34□□□□□ -0.59
GTF3C3-207ENST00000451088 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
GTF3C3-207ENST00000451088 FOSBP53539 338 aa11.33□□□□□ -0.6
GTF3C3-207ENST00000451088 JPH4Q96JJ6 628 aa11.32□□□□□ -0.6
GTF3C3-207ENST00000451088 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
GTF3C3-207ENST00000451088 ARHGAP33O14559 1287 aa11.3□□□□□ -0.6
GTF3C3-207ENST00000451088 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
GTF3C3-207ENST00000451088 LSM11P83369 360 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C3-207ENST00000451088 PDIA6Q15084 440 aa11.28□□□□□ -0.6
GTF3C3-207ENST00000451088 PTGER2P43116 358 aa11.26□□□□□ -0.61
GTF3C3-207ENST00000451088 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
GTF3C3-207ENST00000451088 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
GTF3C3-207ENST00000451088 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
GTF3C3-207ENST00000451088 PHF14O94880 888 aa11.25□□□□□ -0.61
GTF3C3-207ENST00000451088 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
GTF3C3-207ENST00000451088 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
GTF3C3-207ENST00000451088 PSEN2P49810 448 aa11.23□□□□□ -0.61
GTF3C3-207ENST00000451088 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
GTF3C3-207ENST00000451088 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
GTF3C3-207ENST00000451088 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
GTF3C3-207ENST00000451088 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
GTF3C3-207ENST00000451088 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
GTF3C3-207ENST00000451088 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
GTF3C3-207ENST00000451088 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
GTF3C3-207ENST00000451088 TK2O00142 265 aa11.19□□□□□ -0.62
GTF3C3-207ENST00000451088 PTPREP23469 700 aa11.19□□□□□ -0.62
GTF3C3-207ENST00000451088 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
GTF3C3-207ENST00000451088 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
GTF3C3-207ENST00000451088 EPAS1Q99814 870 aa11.19□□□□□ -0.62
GTF3C3-207ENST00000451088 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
GTF3C3-207ENST00000451088 DDX12PQ92771 950 aa11.18□□□□□ -0.62
GTF3C3-207ENST00000451088 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
GTF3C3-207ENST00000451088 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms