RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 ARHGAP5Q13017 1502 aa25.8■■□□□ 1.72
RFTN1-206ENST00000451036 YEATS2Q9ULM3 1422 aa25.8■■□□□ 1.72
RFTN1-206ENST00000451036 ARID4BQ4LE39 1312 aaPredicted RBP25.78■■□□□ 1.72
RFTN1-206ENST00000451036 ADAMTSL3P82987 1691 aa25.77■■□□□ 1.72
RFTN1-206ENST00000451036 CEP162Q5TB80 1403 aa25.77■■□□□ 1.72
RFTN1-206ENST00000451036 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
RFTN1-206ENST00000451036 BCORL1Q5H9F3 1711 aa25.75■■□□□ 1.71
RFTN1-206ENST00000451036 CDC42BPBQ9Y5S2 1711 aa25.75■■□□□ 1.71
RFTN1-206ENST00000451036 MAGI2Q86UL8 1455 aa25.73■■□□□ 1.71
RFTN1-206ENST00000451036 SIGLEC1Q9BZZ2 1709 aa25.72■■□□□ 1.71
RFTN1-206ENST00000451036 PREX2Q70Z35 1606 aa25.72■■□□□ 1.71
RFTN1-206ENST00000451036 PTPRMP28827 1452 aa25.69■■□□□ 1.7
RFTN1-206ENST00000451036 LOC105371045A0A1W2PR82 267 aa25.69■■□□□ 1.7
RFTN1-206ENST00000451036 MADDQ8WXG6 1647 aa25.69■■□□□ 1.7
RFTN1-206ENST00000451036 HECW2Q9P2P5 1572 aa25.69■■□□□ 1.7
RFTN1-206ENST00000451036 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
RFTN1-206ENST00000451036 CDC42BPAQ5VT25 1732 aa25.68■■□□□ 1.7
RFTN1-206ENST00000451036 ZNF518AQ6AHZ1 1483 aa25.67■■□□□ 1.7
RFTN1-206ENST00000451036 ARHGEF12Q9NZN5 1544 aa25.66■■□□□ 1.7
RFTN1-206ENST00000451036 KDM5CP41229 1560 aa25.65■■□□□ 1.7
RFTN1-206ENST00000451036 ABCC1P33527 1531 aa25.64■■□□□ 1.7
RFTN1-206ENST00000451036 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
RFTN1-206ENST00000451036 ATP10AO60312 1499 aa25.62■■□□□ 1.69
RFTN1-206ENST00000451036 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
RFTN1-206ENST00000451036 MTUS2Q5JR59 1369 aa25.6■■□□□ 1.69
RFTN1-206ENST00000451036 C9orf84Q5VXU9 1444 aa25.6■■□□□ 1.69
RFTN1-206ENST00000451036 RIMS1Q86UR5 1692 aaKnown RBP25.59■■□□□ 1.69
RFTN1-206ENST00000451036 ITSN2Q9NZM3 1697 aa25.59■■□□□ 1.69
RFTN1-206ENST00000451036 MLECQ14165 292 aa25.59■■□□□ 1.69
RFTN1-206ENST00000451036 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.69
RFTN1-206ENST00000451036 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
RFTN1-206ENST00000451036 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
RFTN1-206ENST00000451036 DIP2CQ9Y2E4 1556 aa25.55■■□□□ 1.68
RFTN1-206ENST00000451036 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
RFTN1-206ENST00000451036 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
RFTN1-206ENST00000451036 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
RFTN1-206ENST00000451036 EHBP1L1Q8N3D4 1523 aa25.53■■□□□ 1.68
RFTN1-206ENST00000451036 SYCP2Q9BX26 1530 aa25.52■■□□□ 1.68
RFTN1-206ENST00000451036 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
RFTN1-206ENST00000451036 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
RFTN1-206ENST00000451036 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
RFTN1-206ENST00000451036 FER1L4A9Z1Z3 1794 aa25.49■■□□□ 1.67
RFTN1-206ENST00000451036 TIAM1Q13009 1591 aa25.48■■□□□ 1.67
RFTN1-206ENST00000451036 KIDINS220Q9ULH0 1771 aa25.48■■□□□ 1.67
RFTN1-206ENST00000451036 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
RFTN1-206ENST00000451036 REREQ9P2R6 1566 aa25.46■■□□□ 1.67
RFTN1-206ENST00000451036 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
RFTN1-206ENST00000451036 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
RFTN1-206ENST00000451036 PLEKHH2Q8IVE3 1493 aa25.42■■□□□ 1.66
RFTN1-206ENST00000451036 LMTK3Q96Q04 1460 aa25.41■■□□□ 1.66
RFTN1-206ENST00000451036 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
RFTN1-206ENST00000451036 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
RFTN1-206ENST00000451036 AGLP35573 1532 aa25.38■■□□□ 1.65
RFTN1-206ENST00000451036 ILDR1Q86SU0 546 aaPredicted RBP25.38■■□□□ 1.65
RFTN1-206ENST00000451036 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
RFTN1-206ENST00000451036 CEBPAP49715 358 aaPredicted RBP25.36■■□□□ 1.65
RFTN1-206ENST00000451036 ATP7AQ04656 1500 aa25.36■■□□□ 1.65
RFTN1-206ENST00000451036 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
RFTN1-206ENST00000451036 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
RFTN1-206ENST00000451036 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
RFTN1-206ENST00000451036 HSPA2P54652 639 aa25.31■■□□□ 1.64
RFTN1-206ENST00000451036 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
RFTN1-206ENST00000451036 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
RFTN1-206ENST00000451036 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
RFTN1-206ENST00000451036 A2MP01023 1474 aa25.26■■□□□ 1.63
RFTN1-206ENST00000451036 MAP3K1Q13233 1512 aa25.26■■□□□ 1.63
RFTN1-206ENST00000451036 C3P01024 1663 aa25.23■■□□□ 1.63
RFTN1-206ENST00000451036 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
RFTN1-206ENST00000451036 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
RFTN1-206ENST00000451036 RTEL1-TNFRSF6BF6WH68 1400 aa25.2■■□□□ 1.63
RFTN1-206ENST00000451036 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.63
RFTN1-206ENST00000451036 ADGBQ8N7X0 1667 aa25.19■■□□□ 1.62
RFTN1-206ENST00000451036 CNTLNQ9NXG0 1405 aa25.19■■□□□ 1.62
RFTN1-206ENST00000451036 SETD1BQ9UPS6 1966 aaKnown RBP25.15■■□□□ 1.62
RFTN1-206ENST00000451036 GGT6Q6P531 493 aa25.15■■□□□ 1.62
RFTN1-206ENST00000451036 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.62
RFTN1-206ENST00000451036 UHRF1BP1Q6BDS2 1440 aa25.14■■□□□ 1.62
RFTN1-206ENST00000451036 RSPH4AQ5TD94 716 aa25.14■■□□□ 1.62
RFTN1-206ENST00000451036 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
RFTN1-206ENST00000451036 DHX29Q7Z478 1369 aaKnown RBP25.13■■□□□ 1.61
RFTN1-206ENST00000451036 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
RFTN1-206ENST00000451036 MROH2AA6NES4 1674 aa25.11■■□□□ 1.61
RFTN1-206ENST00000451036 CLTCQ00610 1675 aaKnown RBP25.11■■□□□ 1.61
RFTN1-206ENST00000451036 APLP2Q06481 763 aa25.1■■□□□ 1.61
RFTN1-206ENST00000451036 MIA2Q96PC5 1412 aa25.09■■□□□ 1.61
RFTN1-206ENST00000451036 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
RFTN1-206ENST00000451036 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
RFTN1-206ENST00000451036 KIF3BO15066 747 aa25.05■■□□□ 1.6
RFTN1-206ENST00000451036 NPATQ14207 1427 aa25.04■■□□□ 1.6
RFTN1-206ENST00000451036 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
RFTN1-206ENST00000451036 STRCQ7RTU9 1775 aa25.03■■□□□ 1.6
RFTN1-206ENST00000451036 MAST1Q9Y2H9 1570 aa25.02■■□□□ 1.6
RFTN1-206ENST00000451036 PTPRKQ15262 1439 aa25.01■■□□□ 1.59
RFTN1-206ENST00000451036 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
RFTN1-206ENST00000451036 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.58
RFTN1-206ENST00000451036 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
RFTN1-206ENST00000451036 ABCC5O15440 1437 aa24.94■■□□□ 1.58
RFTN1-206ENST00000451036 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
RFTN1-206ENST00000451036 FBXO41Q8TF61 875 aa24.92■■□□□ 1.58
RFTN1-206ENST00000451036 WASHC2CQ9Y4E1 1318 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms