RNA–Protein interactions for RNA: ENST00000449311.5

CAP1-216, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-216ENST00000449311 MAGI2Q86UL8 1455 aa27.76■■■□□ 2.03
CAP1-216ENST00000449311 BCORL1Q5H9F3 1711 aa27.75■■■□□ 2.03
CAP1-216ENST00000449311 SCAPERQ9BY12 1400 aa27.74■■■□□ 2.03
CAP1-216ENST00000449311 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
CAP1-216ENST00000449311 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
CAP1-216ENST00000449311 ARHGAP5Q13017 1502 aa27.71■■■□□ 2.03
CAP1-216ENST00000449311 ZFYVE16Q7Z3T8 1539 aa27.71■■■□□ 2.03
CAP1-216ENST00000449311 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
CAP1-216ENST00000449311 CEP162Q5TB80 1403 aa27.63■■■□□ 2.01
CAP1-216ENST00000449311 ZNF518AQ6AHZ1 1483 aa27.63■■■□□ 2.01
CAP1-216ENST00000449311 KDM5CP41229 1560 aa27.62■■■□□ 2.01
CAP1-216ENST00000449311 YEATS2Q9ULM3 1422 aa27.62■■■□□ 2.01
CAP1-216ENST00000449311 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
CAP1-216ENST00000449311 SIGLEC1Q9BZZ2 1709 aa27.61■■■□□ 2.01
CAP1-216ENST00000449311 MADDQ8WXG6 1647 aa27.6■■■□□ 2.01
CAP1-216ENST00000449311 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
CAP1-216ENST00000449311 PTPRMP28827 1452 aa27.58■■■□□ 2.01
CAP1-216ENST00000449311 HECW2Q9P2P5 1572 aa27.58■■■□□ 2.01
CAP1-216ENST00000449311 ABCC1P33527 1531 aa27.57■■■□□ 2
CAP1-216ENST00000449311 ATP10AO60312 1499 aa27.56■■■□□ 2
CAP1-216ENST00000449311 RIMS1Q86UR5 1692 aaKnown RBP27.54■■■□□ 2
CAP1-216ENST00000449311 C9orf84Q5VXU9 1444 aa27.51■■□□□ 1.99
CAP1-216ENST00000449311 GPATCH8Q9UKJ3 1502 aaKnown RBP27.51■■□□□ 1.99
CAP1-216ENST00000449311 AFAP1Q8N556 730 aa27.5■■□□□ 1.99
CAP1-216ENST00000449311 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
CAP1-216ENST00000449311 MLH3Q9UHC1 1453 aa27.5■■□□□ 1.99
CAP1-216ENST00000449311 MTUS2Q5JR59 1369 aa27.49■■□□□ 1.99
CAP1-216ENST00000449311 FER1L4A9Z1Z3 1794 aa27.49■■□□□ 1.99
CAP1-216ENST00000449311 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
CAP1-216ENST00000449311 REREQ9P2R6 1566 aa27.48■■□□□ 1.99
CAP1-216ENST00000449311 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
CAP1-216ENST00000449311 DIP2CQ9Y2E4 1556 aa27.47■■□□□ 1.99
CAP1-216ENST00000449311 TRAPPC8Q9Y2L5 1435 aa27.46■■□□□ 1.99
CAP1-216ENST00000449311 ABCA6Q8N139 1617 aa27.45■■□□□ 1.98
CAP1-216ENST00000449311 KIDINS220Q9ULH0 1771 aa27.44■■□□□ 1.98
CAP1-216ENST00000449311 LOC105371045A0A1W2PR82 267 aa27.42■■□□□ 1.98
CAP1-216ENST00000449311 CCNB3Q8WWL7 1395 aa27.42■■□□□ 1.98
CAP1-216ENST00000449311 PLEKHH2Q8IVE3 1493 aa27.4■■□□□ 1.98
CAP1-216ENST00000449311 TIAM1Q13009 1591 aa27.39■■□□□ 1.98
CAP1-216ENST00000449311 SYCP2Q9BX26 1530 aa27.39■■□□□ 1.98
CAP1-216ENST00000449311 KIAA1107Q9UPP5 1409 aa27.39■■□□□ 1.97
CAP1-216ENST00000449311 MYT1LQ9UL68 1186 aa27.38■■□□□ 1.97
CAP1-216ENST00000449311 SUPT6HQ7KZ85 1726 aaKnown RBP27.37■■□□□ 1.97
CAP1-216ENST00000449311 CFDP1Q9UEE9 299 aaPredicted RBP27.37■■□□□ 1.97
CAP1-216ENST00000449311 ZNF777Q9ULD5 760 aaPredicted RBP27.37■■□□□ 1.97
CAP1-216ENST00000449311 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
CAP1-216ENST00000449311 AGLP35573 1532 aa27.36■■□□□ 1.97
CAP1-216ENST00000449311 MLECQ14165 292 aa27.35■■□□□ 1.97
CAP1-216ENST00000449311 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.96
CAP1-216ENST00000449311 INO80Q9ULG1 1556 aaPredicted RBP27.29■■□□□ 1.96
CAP1-216ENST00000449311 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
CAP1-216ENST00000449311 ATP7AQ04656 1500 aa27.27■■□□□ 1.96
CAP1-216ENST00000449311 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
CAP1-216ENST00000449311 SPAG9O60271 1321 aaKnown RBP27.27■■□□□ 1.96
CAP1-216ENST00000449311 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
CAP1-216ENST00000449311 SETD1BQ9UPS6 1966 aaKnown RBP27.23■■□□□ 1.95
CAP1-216ENST00000449311 ADGBQ8N7X0 1667 aa27.23■■□□□ 1.95
CAP1-216ENST00000449311 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
CAP1-216ENST00000449311 MBD5Q9P267 1494 aa27.22■■□□□ 1.95
CAP1-216ENST00000449311 PREX1Q8TCU6 1659 aa27.21■■□□□ 1.95
CAP1-216ENST00000449311 C3P01024 1663 aa27.2■■□□□ 1.94
CAP1-216ENST00000449311 PLXNC1O60486 1568 aa27.19■■□□□ 1.94
CAP1-216ENST00000449311 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
CAP1-216ENST00000449311 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
CAP1-216ENST00000449311 MROH2AA6NES4 1674 aa27.16■■□□□ 1.94
CAP1-216ENST00000449311 RTEL1-TNFRSF6BF6WH68 1400 aa27.16■■□□□ 1.94
CAP1-216ENST00000449311 A2MP01023 1474 aa27.15■■□□□ 1.94
CAP1-216ENST00000449311 CAMSAP2Q08AD1 1489 aa27.14■■□□□ 1.94
CAP1-216ENST00000449311 CNTLNQ9NXG0 1405 aa27.14■■□□□ 1.93
CAP1-216ENST00000449311 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
CAP1-216ENST00000449311 ARHGEF5Q12774 1597 aa27.11■■□□□ 1.93
CAP1-216ENST00000449311 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
CAP1-216ENST00000449311 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
CAP1-216ENST00000449311 CCDC141Q6ZP82 1450 aa27.11■■□□□ 1.93
CAP1-216ENST00000449311 KANK4Q5T7N3 995 aaPredicted RBP27.06■■□□□ 1.92
CAP1-216ENST00000449311 CLTCQ00610 1675 aaKnown RBP27.05■■□□□ 1.92
CAP1-216ENST00000449311 HSPA2P54652 639 aa27.04■■□□□ 1.92
CAP1-216ENST00000449311 MIA2Q96PC5 1412 aa27.03■■□□□ 1.92
CAP1-216ENST00000449311 UHRF1BP1Q6BDS2 1440 aa27.02■■□□□ 1.92
CAP1-216ENST00000449311 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
CAP1-216ENST00000449311 PPP6R1Q9UPN7 881 aa27.01■■□□□ 1.91
CAP1-216ENST00000449311 MYOM3Q5VTT5 1437 aa27■■□□□ 1.91
CAP1-216ENST00000449311 APLP2Q06481 763 aa26.99■■□□□ 1.91
CAP1-216ENST00000449311 MAST1Q9Y2H9 1570 aa26.99■■□□□ 1.91
CAP1-216ENST00000449311 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
CAP1-216ENST00000449311 NPATQ14207 1427 aa26.97■■□□□ 1.91
CAP1-216ENST00000449311 TSPY4P0CV99 314 aa26.96■■□□□ 1.91
CAP1-216ENST00000449311 TSPY10P0CW01 314 aa26.96■■□□□ 1.91
CAP1-216ENST00000449311 STRCQ7RTU9 1775 aa26.96■■□□□ 1.91
CAP1-216ENST00000449311 GGT6Q6P531 493 aa26.95■■□□□ 1.9
CAP1-216ENST00000449311 ILDR1Q86SU0 546 aaPredicted RBP26.93■■□□□ 1.9
CAP1-216ENST00000449311 FAM135AQ9P2D6 1515 aa26.92■■□□□ 1.9
CAP1-216ENST00000449311 PTPN23Q9H3S7 1636 aa26.88■■□□□ 1.89
CAP1-216ENST00000449311 CROCC2H7BZ55 1655 aa26.87■■□□□ 1.89
CAP1-216ENST00000449311 ZNF142P52746 1687 aaPredicted RBP26.86■■□□□ 1.89
CAP1-216ENST00000449311 KIF3BO15066 747 aa26.86■■□□□ 1.89
CAP1-216ENST00000449311 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
CAP1-216ENST00000449311 PTPRKQ15262 1439 aa26.85■■□□□ 1.89
CAP1-216ENST00000449311 MYO3AQ8NEV4 1616 aa26.84■■□□□ 1.89
CAP1-216ENST00000449311 DMRT2Q9Y5R5 561 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms