RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
SHMT2-203ENST00000449049 CD109Q6YHK3 1445 aa21.53■■□□□ 1.04
SHMT2-203ENST00000449049 ARHGAP5Q13017 1502 aa21.53■■□□□ 1.04
SHMT2-203ENST00000449049 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
SHMT2-203ENST00000449049 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
SHMT2-203ENST00000449049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHMT2-203ENST00000449049 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
SHMT2-203ENST00000449049 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
SHMT2-203ENST00000449049 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
SHMT2-203ENST00000449049 CFAP74Q9C0B2 1584 aa21.47■■□□□ 1.03
SHMT2-203ENST00000449049 FANCAO15360 1455 aa21.47■■□□□ 1.03
SHMT2-203ENST00000449049 PPRC1Q5VV67 1664 aaKnown RBP21.47■■□□□ 1.03
SHMT2-203ENST00000449049 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
SHMT2-203ENST00000449049 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
SHMT2-203ENST00000449049 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
SHMT2-203ENST00000449049 ZNF777Q9ULD5 760 aaPredicted RBP21.43■■□□□ 1.02
SHMT2-203ENST00000449049 PLEKHH2Q8IVE3 1493 aa21.43■■□□□ 1.02
SHMT2-203ENST00000449049 ABCC1P33527 1531 aa21.43■■□□□ 1.02
SHMT2-203ENST00000449049 NEO1Q92859 1461 aa21.42■■□□□ 1.02
SHMT2-203ENST00000449049 TSPOAP1O95153 1857 aa21.41■■□□□ 1.02
SHMT2-203ENST00000449049 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
SHMT2-203ENST00000449049 TEX14Q8IWB6 1497 aa21.4■■□□□ 1.02
SHMT2-203ENST00000449049 DNMT1P26358 1616 aaKnown RBP21.4■■□□□ 1.02
SHMT2-203ENST00000449049 ARHGEF5Q12774 1597 aa21.39■■□□□ 1.01
SHMT2-203ENST00000449049 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
SHMT2-203ENST00000449049 AKNAQ7Z591 1439 aa21.39■■□□□ 1.01
SHMT2-203ENST00000449049 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
SHMT2-203ENST00000449049 ARHGEF12Q9NZN5 1544 aa21.37■■□□□ 1.01
SHMT2-203ENST00000449049 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
SHMT2-203ENST00000449049 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
SHMT2-203ENST00000449049 DAPK1P53355 1430 aa21.35■■□□□ 1.01
SHMT2-203ENST00000449049 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
SHMT2-203ENST00000449049 ABCC5O15440 1437 aa21.33■■□□□ 1.01
SHMT2-203ENST00000449049 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1
SHMT2-203ENST00000449049 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
SHMT2-203ENST00000449049 SCAPERQ9BY12 1400 aa21.32■■□□□ 1
SHMT2-203ENST00000449049 PTPRKQ15262 1439 aa21.31■■□□□ 1
SHMT2-203ENST00000449049 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
SHMT2-203ENST00000449049 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
SHMT2-203ENST00000449049 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
SHMT2-203ENST00000449049 PCGF6Q9BYE7 350 aa21.29■■□□□ 1
SHMT2-203ENST00000449049 ITGAEP38570 1179 aa21.28■■□□□ 1
SHMT2-203ENST00000449049 MAST1Q9Y2H9 1570 aa21.27■■□□□ 1
SHMT2-203ENST00000449049 POGZQ7Z3K3 1410 aa21.27■■□□□ 1
SHMT2-203ENST00000449049 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
SHMT2-203ENST00000449049 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
SHMT2-203ENST00000449049 ZNF518AQ6AHZ1 1483 aa21.25■□□□□ 0.99
SHMT2-203ENST00000449049 RICTORQ6R327 1708 aa21.25■□□□□ 0.99
SHMT2-203ENST00000449049 KDM5CP41229 1560 aa21.25■□□□□ 0.99
SHMT2-203ENST00000449049 C9orf84Q5VXU9 1444 aa21.24■□□□□ 0.99
SHMT2-203ENST00000449049 ADGRL2O95490 1459 aa21.23■□□□□ 0.99
SHMT2-203ENST00000449049 FRMPD1Q5SYB0 1578 aa21.23■□□□□ 0.99
SHMT2-203ENST00000449049 INO80Q9ULG1 1556 aaPredicted RBP21.22■□□□□ 0.99
SHMT2-203ENST00000449049 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
SHMT2-203ENST00000449049 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
SHMT2-203ENST00000449049 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
SHMT2-203ENST00000449049 AFAP1Q8N556 730 aa21.21■□□□□ 0.99
SHMT2-203ENST00000449049 ZFYVE16Q7Z3T8 1539 aa21.2■□□□□ 0.98
SHMT2-203ENST00000449049 RTEL1-TNFRSF6BF6WH68 1400 aa21.19■□□□□ 0.98
SHMT2-203ENST00000449049 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
SHMT2-203ENST00000449049 COL17A1Q9UMD9 1497 aaPredicted RBP21.18■□□□□ 0.98
SHMT2-203ENST00000449049 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
SHMT2-203ENST00000449049 ZMYM4Q5VZL5 1548 aa21.18■□□□□ 0.98
SHMT2-203ENST00000449049 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
SHMT2-203ENST00000449049 ATP7AQ04656 1500 aa21.17■□□□□ 0.98
SHMT2-203ENST00000449049 NCOA1Q15788 1441 aa21.17■□□□□ 0.98
SHMT2-203ENST00000449049 MLH3Q9UHC1 1453 aa21.17■□□□□ 0.98
SHMT2-203ENST00000449049 GCC2Q8IWJ2 1684 aa21.16■□□□□ 0.98
SHMT2-203ENST00000449049 HFM1A2PYH4 1435 aa21.16■□□□□ 0.98
SHMT2-203ENST00000449049 RAPGEF3O95398 923 aa21.16■□□□□ 0.98
SHMT2-203ENST00000449049 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
SHMT2-203ENST00000449049 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
SHMT2-203ENST00000449049 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
SHMT2-203ENST00000449049 NAIPQ13075 1403 aa21.14■□□□□ 0.97
SHMT2-203ENST00000449049 KDM6BO15054 1643 aa21.12■□□□□ 0.97
SHMT2-203ENST00000449049 MAGI2Q86UL8 1455 aa21.1■□□□□ 0.97
SHMT2-203ENST00000449049 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
SHMT2-203ENST00000449049 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
SHMT2-203ENST00000449049 KIF15Q9NS87 1388 aa21.09■□□□□ 0.97
SHMT2-203ENST00000449049 ABCA6Q8N139 1617 aa21.09■□□□□ 0.97
SHMT2-203ENST00000449049 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
SHMT2-203ENST00000449049 DIP2CQ9Y2E4 1556 aa21.07■□□□□ 0.96
SHMT2-203ENST00000449049 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
SHMT2-203ENST00000449049 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
SHMT2-203ENST00000449049 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
SHMT2-203ENST00000449049 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
SHMT2-203ENST00000449049 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
SHMT2-203ENST00000449049 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
SHMT2-203ENST00000449049 A2MP01023 1474 aa21■□□□□ 0.95
SHMT2-203ENST00000449049 HRCP23327 699 aa20.99■□□□□ 0.95
SHMT2-203ENST00000449049 REREQ9P2R6 1566 aa20.99■□□□□ 0.95
SHMT2-203ENST00000449049 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
SHMT2-203ENST00000449049 EIF2AK4Q9P2K8 1649 aaKnown RBP20.99■□□□□ 0.95
SHMT2-203ENST00000449049 ATP10AO60312 1499 aa20.97■□□□□ 0.95
SHMT2-203ENST00000449049 BCORL1Q5H9F3 1711 aa20.96■□□□□ 0.95
SHMT2-203ENST00000449049 UNC13BO14795 1591 aa20.93■□□□□ 0.94
SHMT2-203ENST00000449049 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
SHMT2-203ENST00000449049 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
SHMT2-203ENST00000449049 AGLP35573 1532 aa20.9■□□□□ 0.94
SHMT2-203ENST00000449049 RNF17Q9BXT8 1623 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms