RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
FAM60A-202ENST00000448582 AAMPQ13685 434 aa8.07□□□□□ -1.12
FAM60A-202ENST00000448582 MAGI1Q96QZ7 1491 aaPredicted RBP8.07□□□□□ -1.12
FAM60A-202ENST00000448582 ATXN8OSP0DMR3 200 aa8.07□□□□□ -1.12
FAM60A-202ENST00000448582 RSPH4AQ5TD94 716 aa8.07□□□□□ -1.12
FAM60A-202ENST00000448582 PPRC1Q5VV67 1664 aaKnown RBP8.06□□□□□ -1.12
FAM60A-202ENST00000448582 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
FAM60A-202ENST00000448582 MYCNP04198 464 aaPredicted RBP8.06□□□□□ -1.12
FAM60A-202ENST00000448582 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
FAM60A-202ENST00000448582 TARBP1Q13395 1621 aaKnown RBP8.05□□□□□ -1.12
FAM60A-202ENST00000448582 NAP1L5Q96NT1 182 aaPredicted RBP8.05□□□□□ -1.12
FAM60A-202ENST00000448582 CERS3Q8IU89 383 aa8.05□□□□□ -1.12
FAM60A-202ENST00000448582 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
FAM60A-202ENST00000448582 CYB5RLQ6IPT4 315 aa8.04□□□□□ -1.12
FAM60A-202ENST00000448582 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
FAM60A-202ENST00000448582 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
FAM60A-202ENST00000448582 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
FAM60A-202ENST00000448582 BCCIPQ9P287 314 aaKnown RBP eCLIP8.02□□□□□ -1.13
FAM60A-202ENST00000448582 MED1Q15648 1581 aaPredicted RBP8.02□□□□□ -1.13
FAM60A-202ENST00000448582 URB2Q14146 1524 aaKnown RBP8.01□□□□□ -1.13
FAM60A-202ENST00000448582 PRDM16Q9HAZ2 1276 aa8□□□□□ -1.13
FAM60A-202ENST00000448582 APBB1O00213 710 aa7.98□□□□□ -1.13
FAM60A-202ENST00000448582 IFFO2Q5TF58 517 aa7.98□□□□□ -1.13
FAM60A-202ENST00000448582 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
FAM60A-202ENST00000448582 FANCD2Q9BXW9 1451 aa7.98□□□□□ -1.13
FAM60A-202ENST00000448582 PCGF6Q9BYE7 350 aa7.98□□□□□ -1.13
FAM60A-202ENST00000448582 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
FAM60A-202ENST00000448582 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
FAM60A-202ENST00000448582 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
FAM60A-202ENST00000448582 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
FAM60A-202ENST00000448582 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
FAM60A-202ENST00000448582 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
FAM60A-202ENST00000448582 IFNLR1Q8IU57 520 aaPredicted RBP7.96□□□□□ -1.13
FAM60A-202ENST00000448582 CNPY4Q8N129 248 aa7.96□□□□□ -1.13
FAM60A-202ENST00000448582 NEUROD2Q15784 382 aa7.96□□□□□ -1.14
FAM60A-202ENST00000448582 CFTRP13569 1480 aa7.96□□□□□ -1.14
FAM60A-202ENST00000448582 KDM4AO75164 1064 aa7.95□□□□□ -1.14
FAM60A-202ENST00000448582 CERKQ8TCT0 537 aa7.95□□□□□ -1.14
FAM60A-202ENST00000448582 ZMYND15Q9H091 742 aa7.95□□□□□ -1.14
FAM60A-202ENST00000448582 MAP3K4Q9Y6R4 1608 aa7.94□□□□□ -1.14
FAM60A-202ENST00000448582 TICAM2Q86XR7 235 aa7.94□□□□□ -1.14
FAM60A-202ENST00000448582 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
FAM60A-202ENST00000448582 PTPRTO14522 1441 aa7.93□□□□□ -1.14
FAM60A-202ENST00000448582 TEX14Q8IWB6 1497 aa7.92□□□□□ -1.14
FAM60A-202ENST00000448582 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
FAM60A-202ENST00000448582 CFAP43Q8NDM7 1665 aa7.92□□□□□ -1.14
FAM60A-202ENST00000448582 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
FAM60A-202ENST00000448582 SPRYD3Q8NCJ5 442 aa7.89□□□□□ -1.15
FAM60A-202ENST00000448582 LRP5O75197 1615 aa7.89□□□□□ -1.15
FAM60A-202ENST00000448582 ARID4BQ4LE39 1312 aaPredicted RBP7.88□□□□□ -1.15
FAM60A-202ENST00000448582 PSMD1Q99460 953 aa7.88□□□□□ -1.15
FAM60A-202ENST00000448582 PBRM1Q86U86 1689 aa7.88□□□□□ -1.15
FAM60A-202ENST00000448582 FAM43BQ6ZT52 329 aaPredicted RBP7.88□□□□□ -1.15
FAM60A-202ENST00000448582 CCDC82Q8N4S0 544 aa7.87□□□□□ -1.15
FAM60A-202ENST00000448582 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
FAM60A-202ENST00000448582 PREX1Q8TCU6 1659 aa7.87□□□□□ -1.15
FAM60A-202ENST00000448582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■□□□□ 8.5
FAM60A-202ENST00000448582 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
FAM60A-202ENST00000448582 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
FAM60A-202ENST00000448582 KCNG1Q9UIX4 513 aa7.85□□□□□ -1.15
FAM60A-202ENST00000448582 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
FAM60A-202ENST00000448582 EPRSP07814 1512 aaKnown RBP7.85□□□□□ -1.15
FAM60A-202ENST00000448582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
FAM60A-202ENST00000448582 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
FAM60A-202ENST00000448582 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
FAM60A-202ENST00000448582 RGL2O15211 777 aa7.84□□□□□ -1.15
FAM60A-202ENST00000448582 U3KPZ7 1027 aaPredicted RBP7.84□□□□□ -1.15
FAM60A-202ENST00000448582 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
FAM60A-202ENST00000448582 MROH2BQ7Z745 1585 aa7.82□□□□□ -1.16
FAM60A-202ENST00000448582 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
FAM60A-202ENST00000448582 ATF5Q9Y2D1 282 aaPredicted RBP7.81□□□□□ -1.16
FAM60A-202ENST00000448582 SLC24A3Q9HC58 644 aa7.81□□□□□ -1.16
FAM60A-202ENST00000448582 NCLP19338 710 aaKnown RBP7.8□□□□□ -1.16
FAM60A-202ENST00000448582 ZNF326Q5BKZ1 582 aaKnown RBP7.8□□□□□ -1.16
FAM60A-202ENST00000448582 SECISBP2LQ93073 1101 aaKnown RBP7.8□□□□□ -1.16
FAM60A-202ENST00000448582 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
FAM60A-202ENST00000448582 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
FAM60A-202ENST00000448582 WIZO95785 1651 aa7.8□□□□□ -1.16
FAM60A-202ENST00000448582 WWC1Q8IX03 1113 aa7.8□□□□□ -1.16
FAM60A-202ENST00000448582 PTPRMP28827 1452 aa7.79□□□□□ -1.16
FAM60A-202ENST00000448582 MKRN3Q13064 507 aaKnown RBP7.79□□□□□ -1.16
FAM60A-202ENST00000448582 CLSTN1O94985 981 aa7.78□□□□□ -1.16
FAM60A-202ENST00000448582 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
FAM60A-202ENST00000448582 SLC34A2O95436 690 aa7.78□□□□□ -1.16
FAM60A-202ENST00000448582 ANP32EQ9BTT0 268 aa7.78□□□□□ -1.16
FAM60A-202ENST00000448582 NAP1L2Q9ULW6 460 aaPredicted RBP7.78□□□□□ -1.16
FAM60A-202ENST00000448582 LMOD2Q6P5Q4 547 aa7.77□□□□□ -1.17
FAM60A-202ENST00000448582 NUP160Q12769 1436 aa7.77□□□□□ -1.17
FAM60A-202ENST00000448582 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
FAM60A-202ENST00000448582 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
FAM60A-202ENST00000448582 TTC37Q6PGP7 1564 aa7.76□□□□□ -1.17
FAM60A-202ENST00000448582 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
FAM60A-202ENST00000448582 TEX2Q8IWB9 1127 aa7.75□□□□□ -1.17
FAM60A-202ENST00000448582 PHLDB1Q86UU1 1377 aa7.75□□□□□ -1.17
FAM60A-202ENST00000448582 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
FAM60A-202ENST00000448582 VASPP50552 380 aaPredicted RBP7.75□□□□□ -1.17
FAM60A-202ENST00000448582 FAM50AQ14320 339 aaKnown RBP7.75□□□□□ -1.17
FAM60A-202ENST00000448582 MYT1LQ9UL68 1186 aa7.75□□□□□ -1.17
FAM60A-202ENST00000448582 BRD1O95696 1058 aa7.74□□□□□ -1.17
FAM60A-202ENST00000448582 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms