RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 AKNAQ7Z591 1439 aa18.86■□□□□ 0.61
RFC4-208ENST00000447345 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
RFC4-208ENST00000447345 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
RFC4-208ENST00000447345 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
RFC4-208ENST00000447345 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
RFC4-208ENST00000447345 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
RFC4-208ENST00000447345 SAMD9LQ8IVG5 1584 aa18.8■□□□□ 0.6
RFC4-208ENST00000447345 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
RFC4-208ENST00000447345 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
RFC4-208ENST00000447345 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
RFC4-208ENST00000447345 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
RFC4-208ENST00000447345 ABCC1P33527 1531 aa18.79■□□□□ 0.6
RFC4-208ENST00000447345 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
RFC4-208ENST00000447345 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
RFC4-208ENST00000447345 APLP2Q06481 763 aa18.76■□□□□ 0.59
RFC4-208ENST00000447345 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
RFC4-208ENST00000447345 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
RFC4-208ENST00000447345 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
RFC4-208ENST00000447345 ZNF777Q9ULD5 760 aaPredicted RBP18.74■□□□□ 0.59
RFC4-208ENST00000447345 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
RFC4-208ENST00000447345 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
RFC4-208ENST00000447345 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
RFC4-208ENST00000447345 ZFYVE16Q7Z3T8 1539 aa18.7■□□□□ 0.58
RFC4-208ENST00000447345 KDM5CP41229 1560 aa18.7■□□□□ 0.58
RFC4-208ENST00000447345 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
RFC4-208ENST00000447345 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
RFC4-208ENST00000447345 ZNF518AQ6AHZ1 1483 aa18.7■□□□□ 0.58
RFC4-208ENST00000447345 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
RFC4-208ENST00000447345 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
RFC4-208ENST00000447345 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
RFC4-208ENST00000447345 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
RFC4-208ENST00000447345 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
RFC4-208ENST00000447345 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
RFC4-208ENST00000447345 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
RFC4-208ENST00000447345 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
RFC4-208ENST00000447345 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
RFC4-208ENST00000447345 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
RFC4-208ENST00000447345 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
RFC4-208ENST00000447345 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
RFC4-208ENST00000447345 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
RFC4-208ENST00000447345 INO80Q9ULG1 1556 aaPredicted RBP18.61■□□□□ 0.57
RFC4-208ENST00000447345 HNRNPMP52272 730 aaKnown RBP eCLIP18.61■□□□□ 0.57
RFC4-208ENST00000447345 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
RFC4-208ENST00000447345 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
RFC4-208ENST00000447345 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
RFC4-208ENST00000447345 ATP7AQ04656 1500 aa18.58■□□□□ 0.56
RFC4-208ENST00000447345 MLH3Q9UHC1 1453 aa18.58■□□□□ 0.56
RFC4-208ENST00000447345 MBD5Q9P267 1494 aa18.56■□□□□ 0.56
RFC4-208ENST00000447345 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
RFC4-208ENST00000447345 ARID4BQ4LE39 1312 aaPredicted RBP18.55■□□□□ 0.56
RFC4-208ENST00000447345 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
RFC4-208ENST00000447345 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
RFC4-208ENST00000447345 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
RFC4-208ENST00000447345 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
RFC4-208ENST00000447345 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
RFC4-208ENST00000447345 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
RFC4-208ENST00000447345 ATP10AO60312 1499 aa18.54■□□□□ 0.56
RFC4-208ENST00000447345 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
RFC4-208ENST00000447345 MADDQ8WXG6 1647 aa18.53■□□□□ 0.56
RFC4-208ENST00000447345 ADAMTSL3P82987 1691 aa18.53■□□□□ 0.56
RFC4-208ENST00000447345 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
RFC4-208ENST00000447345 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
RFC4-208ENST00000447345 FER1L4A9Z1Z3 1794 aa18.52■□□□□ 0.55
RFC4-208ENST00000447345 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
RFC4-208ENST00000447345 RIMS1Q86UR5 1692 aaKnown RBP18.51■□□□□ 0.55
RFC4-208ENST00000447345 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
RFC4-208ENST00000447345 DNMT1P26358 1616 aaKnown RBP18.48■□□□□ 0.55
RFC4-208ENST00000447345 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
RFC4-208ENST00000447345 MLECQ14165 292 aa18.46■□□□□ 0.55
RFC4-208ENST00000447345 PLXNC1O60486 1568 aa18.46■□□□□ 0.55
RFC4-208ENST00000447345 MAST1Q9Y2H9 1570 aa18.46■□□□□ 0.55
RFC4-208ENST00000447345 A2MP01023 1474 aa18.43■□□□□ 0.54
RFC4-208ENST00000447345 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
RFC4-208ENST00000447345 AGLP35573 1532 aa18.42■□□□□ 0.54
RFC4-208ENST00000447345 DAPK1P53355 1430 aa18.4■□□□□ 0.54
RFC4-208ENST00000447345 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
RFC4-208ENST00000447345 RSPH4AQ5TD94 716 aa18.4■□□□□ 0.54
RFC4-208ENST00000447345 ABCC5O15440 1437 aa18.4■□□□□ 0.54
RFC4-208ENST00000447345 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
RFC4-208ENST00000447345 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
RFC4-208ENST00000447345 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
RFC4-208ENST00000447345 PTPRMP28827 1452 aa18.38■□□□□ 0.53
RFC4-208ENST00000447345 CLTCQ00610 1675 aaKnown RBP18.36■□□□□ 0.53
RFC4-208ENST00000447345 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
RFC4-208ENST00000447345 C3P01024 1663 aa18.33■□□□□ 0.52
RFC4-208ENST00000447345 EIF2AK4Q9P2K8 1649 aaKnown RBP18.32■□□□□ 0.52
RFC4-208ENST00000447345 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
RFC4-208ENST00000447345 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
RFC4-208ENST00000447345 DUOX2Q9NRD8 1548 aa18.3■□□□□ 0.52
RFC4-208ENST00000447345 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
RFC4-208ENST00000447345 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
RFC4-208ENST00000447345 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
RFC4-208ENST00000447345 GGT6Q6P531 493 aa18.27■□□□□ 0.52
RFC4-208ENST00000447345 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
RFC4-208ENST00000447345 CEP152O94986 1710 aa18.26■□□□□ 0.51
RFC4-208ENST00000447345 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
RFC4-208ENST00000447345 KIF3BO15066 747 aa18.26■□□□□ 0.51
RFC4-208ENST00000447345 ITGAEP38570 1179 aa18.26■□□□□ 0.51
RFC4-208ENST00000447345 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
RFC4-208ENST00000447345 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms