RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
RAB5A-205ENST00000446547 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.71
RAB5A-205ENST00000446547 CFAP44Q96MT7 982 aa10.65□□□□□ -0.71
RAB5A-205ENST00000446547 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
RAB5A-205ENST00000446547 ERBB3P21860 1342 aa10.61□□□□□ -0.71
RAB5A-205ENST00000446547 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
RAB5A-205ENST00000446547 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
RAB5A-205ENST00000446547 TMEM92Q6UXU6 159 aa10.58□□□□□ -0.72
RAB5A-205ENST00000446547 MICALL2Q8IY33 904 aa10.58□□□□□ -0.72
RAB5A-205ENST00000446547 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
RAB5A-205ENST00000446547 SOX12O15370 315 aa10.56□□□□□ -0.72
RAB5A-205ENST00000446547 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
RAB5A-205ENST00000446547 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
RAB5A-205ENST00000446547 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
RAB5A-205ENST00000446547 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
RAB5A-205ENST00000446547 BCANQ96GW7 911 aa10.53□□□□□ -0.72
RAB5A-205ENST00000446547 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
RAB5A-205ENST00000446547 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
RAB5A-205ENST00000446547 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.73
RAB5A-205ENST00000446547 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
RAB5A-205ENST00000446547 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
RAB5A-205ENST00000446547 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
RAB5A-205ENST00000446547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
RAB5A-205ENST00000446547 ZFP91Q96JP5 570 aaPredicted RBP10.48□□□□□ -0.73
RAB5A-205ENST00000446547 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
RAB5A-205ENST00000446547 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
RAB5A-205ENST00000446547 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.74
RAB5A-205ENST00000446547 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
RAB5A-205ENST00000446547 PTGER2P43116 358 aa10.42□□□□□ -0.74
RAB5A-205ENST00000446547 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
RAB5A-205ENST00000446547 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
RAB5A-205ENST00000446547 NLRP6P59044 892 aa10.39□□□□□ -0.75
RAB5A-205ENST00000446547 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
RAB5A-205ENST00000446547 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
RAB5A-205ENST00000446547 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
RAB5A-205ENST00000446547 KIF3CO14782 793 aa10.34□□□□□ -0.75
RAB5A-205ENST00000446547 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.755e-7■■■■□ 23.4
RAB5A-205ENST00000446547 NKX1-1Q15270 411 aaPredicted RBP10.33□□□□□ -0.76
RAB5A-205ENST00000446547 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
RAB5A-205ENST00000446547 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.764e-8■■□□□ 14.1
RAB5A-205ENST00000446547 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
RAB5A-205ENST00000446547 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
RAB5A-205ENST00000446547 STK25O00506 426 aa10.3□□□□□ -0.76
RAB5A-205ENST00000446547 C2orf72A6NCS6 295 aa10.27□□□□□ -0.76
RAB5A-205ENST00000446547 SLC34A2O95436 690 aa10.27□□□□□ -0.76
RAB5A-205ENST00000446547 PBX2P40425 430 aa10.27□□□□□ -0.76
RAB5A-205ENST00000446547 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.76
RAB5A-205ENST00000446547 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
RAB5A-205ENST00000446547 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
RAB5A-205ENST00000446547 NUDT7P0C024 238 aa10.24□□□□□ -0.77
RAB5A-205ENST00000446547 POTEEQ6S8J3 1075 aa10.24□□□□□ -0.77
RAB5A-205ENST00000446547 LHX6Q9UPM6 363 aa10.22□□□□□ -0.77
RAB5A-205ENST00000446547 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
RAB5A-205ENST00000446547 NBR1Q14596 966 aa10.17□□□□□ -0.78
RAB5A-205ENST00000446547 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
RAB5A-205ENST00000446547 TMC2Q8TDI7 906 aa10.15□□□□□ -0.78
RAB5A-205ENST00000446547 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
RAB5A-205ENST00000446547 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
RAB5A-205ENST00000446547 ARHGAP33O14559 1287 aa10.13□□□□□ -0.79
RAB5A-205ENST00000446547 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
RAB5A-205ENST00000446547 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
RAB5A-205ENST00000446547 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
RAB5A-205ENST00000446547 PTCD2Q8WV60 388 aaKnown RBP10.1□□□□□ -0.79
RAB5A-205ENST00000446547 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
RAB5A-205ENST00000446547 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
RAB5A-205ENST00000446547 TK2O00142 265 aa10.09□□□□□ -0.79
RAB5A-205ENST00000446547 PPP1R37O75864 691 aa10.09□□□□□ -0.79
RAB5A-205ENST00000446547 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
RAB5A-205ENST00000446547 RB1CC1Q8TDY2 1594 aa10.07□□□□□ -0.8
RAB5A-205ENST00000446547 HRO43593 1189 aa10.07□□□□□ -0.8
RAB5A-205ENST00000446547 FOXK1P85037 733 aa10.04□□□□□ -0.8
RAB5A-205ENST00000446547 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.8
RAB5A-205ENST00000446547 PSEN2P49810 448 aa10.01□□□□□ -0.81
RAB5A-205ENST00000446547 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
RAB5A-205ENST00000446547 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
RAB5A-205ENST00000446547 PLPP6Q8IY26 295 aa10□□□□□ -0.81
RAB5A-205ENST00000446547 PPP4R3BQ5MIZ7 849 aa9.99□□□□□ -0.81
RAB5A-205ENST00000446547 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
RAB5A-205ENST00000446547 BICRAQ9NZM4 1560 aa9.98□□□□□ -0.81
RAB5A-205ENST00000446547 UNC13AQ9UPW8 1703 aa9.97□□□□□ -0.81
RAB5A-205ENST00000446547 TBC1D12O60347 775 aa9.96□□□□□ -0.82
RAB5A-205ENST00000446547 DSG2Q14126 1118 aa9.95□□□□□ -0.82
RAB5A-205ENST00000446547 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
RAB5A-205ENST00000446547 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
RAB5A-205ENST00000446547 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
RAB5A-205ENST00000446547 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
RAB5A-205ENST00000446547 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
RAB5A-205ENST00000446547 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
RAB5A-205ENST00000446547 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
RAB5A-205ENST00000446547 SLC4A5Q9BY07 1137 aa9.89□□□□□ -0.83
RAB5A-205ENST00000446547 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
RAB5A-205ENST00000446547 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
RAB5A-205ENST00000446547 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
RAB5A-205ENST00000446547 CUX2O14529 1486 aa9.87□□□□□ -0.83
RAB5A-205ENST00000446547 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
RAB5A-205ENST00000446547 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
RAB5A-205ENST00000446547 RGS20O76081 388 aa9.84□□□□□ -0.83
RAB5A-205ENST00000446547 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
RAB5A-205ENST00000446547 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
RAB5A-205ENST00000446547 FOSBP53539 338 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms