RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 KIF3CO14782 793 aa10.61□□□□□ -0.71
HMGB1P48-201ENST00000446155 TMEM92Q6UXU6 159 aa10.6□□□□□ -0.71
HMGB1P48-201ENST00000446155 LARP6Q9BRS8 491 aaKnown RBP10.6□□□□□ -0.71
HMGB1P48-201ENST00000446155 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
HMGB1P48-201ENST00000446155 G3V3G9 751 aa10.58□□□□□ -0.72
HMGB1P48-201ENST00000446155 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
HMGB1P48-201ENST00000446155 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
HMGB1P48-201ENST00000446155 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
HMGB1P48-201ENST00000446155 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
HMGB1P48-201ENST00000446155 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
HMGB1P48-201ENST00000446155 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
HMGB1P48-201ENST00000446155 FOXK1P85037 733 aa10.54□□□□□ -0.72
HMGB1P48-201ENST00000446155 DSG2Q14126 1118 aa10.54□□□□□ -0.72
HMGB1P48-201ENST00000446155 E2F4Q16254 413 aa10.54□□□□□ -0.72
HMGB1P48-201ENST00000446155 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
HMGB1P48-201ENST00000446155 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
HMGB1P48-201ENST00000446155 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
HMGB1P48-201ENST00000446155 BCANQ96GW7 911 aa10.53□□□□□ -0.72
HMGB1P48-201ENST00000446155 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
HMGB1P48-201ENST00000446155 ARIH1Q9Y4X5 557 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P48-201ENST00000446155 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
HMGB1P48-201ENST00000446155 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
HMGB1P48-201ENST00000446155 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
HMGB1P48-201ENST00000446155 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
HMGB1P48-201ENST00000446155 NBR1Q14596 966 aa10.42□□□□□ -0.74
HMGB1P48-201ENST00000446155 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
HMGB1P48-201ENST00000446155 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
HMGB1P48-201ENST00000446155 SLC34A2O95436 690 aa10.37□□□□□ -0.75
HMGB1P48-201ENST00000446155 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
HMGB1P48-201ENST00000446155 DPYSL4O14531 572 aa10.35□□□□□ -0.75
HMGB1P48-201ENST00000446155 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
HMGB1P48-201ENST00000446155 PDIA6Q15084 440 aa10.34□□□□□ -0.75
HMGB1P48-201ENST00000446155 SLAIN1Q8ND83 568 aa10.34□□□□□ -0.75
HMGB1P48-201ENST00000446155 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
HMGB1P48-201ENST00000446155 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
HMGB1P48-201ENST00000446155 SEMA3EO15041 775 aa10.32□□□□□ -0.76
HMGB1P48-201ENST00000446155 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
HMGB1P48-201ENST00000446155 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
HMGB1P48-201ENST00000446155 LHX8Q68G74 356 aa10.31□□□□□ -0.76
HMGB1P48-201ENST00000446155 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGB1P48-201ENST00000446155 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
HMGB1P48-201ENST00000446155 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
HMGB1P48-201ENST00000446155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGB1P48-201ENST00000446155 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
HMGB1P48-201ENST00000446155 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P48-201ENST00000446155 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P48-201ENST00000446155 PTGER2P43116 358 aa10.23□□□□□ -0.77
HMGB1P48-201ENST00000446155 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
HMGB1P48-201ENST00000446155 TBC1D12O60347 775 aa10.22□□□□□ -0.77
HMGB1P48-201ENST00000446155 EVI5O60447 810 aa10.22□□□□□ -0.77
HMGB1P48-201ENST00000446155 GPR153Q6NV75 609 aa10.21□□□□□ -0.77
HMGB1P48-201ENST00000446155 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
HMGB1P48-201ENST00000446155 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
HMGB1P48-201ENST00000446155 SNPHO15079 494 aa10.17□□□□□ -0.78
HMGB1P48-201ENST00000446155 SMYD5Q6GMV2 418 aa10.17□□□□□ -0.78
HMGB1P48-201ENST00000446155 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
HMGB1P48-201ENST00000446155 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGB1P48-201ENST00000446155 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
HMGB1P48-201ENST00000446155 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
HMGB1P48-201ENST00000446155 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
HMGB1P48-201ENST00000446155 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
HMGB1P48-201ENST00000446155 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
HMGB1P48-201ENST00000446155 OSBPP22059 807 aa10.14□□□□□ -0.79
HMGB1P48-201ENST00000446155 PRIM1P49642 420 aaKnown RBP10.13□□□□□ -0.79
HMGB1P48-201ENST00000446155 DDX12PQ92771 950 aa10.13□□□□□ -0.79
HMGB1P48-201ENST00000446155 GRXCR2A6NFK2 248 aa10.12□□□□□ -0.79
HMGB1P48-201ENST00000446155 NUDT7P0C024 238 aa10.12□□□□□ -0.79
HMGB1P48-201ENST00000446155 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P48-201ENST00000446155 ZNF710Q8N1W2 664 aa10.12□□□□□ -0.79
HMGB1P48-201ENST00000446155 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
HMGB1P48-201ENST00000446155 PHF14O94880 888 aa10.1□□□□□ -0.79
HMGB1P48-201ENST00000446155 FOSBP53539 338 aa10.09□□□□□ -0.79
HMGB1P48-201ENST00000446155 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
HMGB1P48-201ENST00000446155 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
HMGB1P48-201ENST00000446155 GPR37O15354 613 aa10.08□□□□□ -0.8
HMGB1P48-201ENST00000446155 EPAS1Q99814 870 aa10.08□□□□□ -0.8
HMGB1P48-201ENST00000446155 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
HMGB1P48-201ENST00000446155 LHX6Q9UPM6 363 aa10.06□□□□□ -0.8
HMGB1P48-201ENST00000446155 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P48-201ENST00000446155 ST18O60284 1047 aa10.04□□□□□ -0.8
HMGB1P48-201ENST00000446155 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
HMGB1P48-201ENST00000446155 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
HMGB1P48-201ENST00000446155 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
HMGB1P48-201ENST00000446155 ZMYND10O75800 440 aa10.02□□□□□ -0.81
HMGB1P48-201ENST00000446155 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P48-201ENST00000446155 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
HMGB1P48-201ENST00000446155 PSDA5PKW4 1024 aaPredicted RBP10□□□□□ -0.81
HMGB1P48-201ENST00000446155 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
HMGB1P48-201ENST00000446155 BARGINQ6ZT62 677 aa9.99□□□□□ -0.81
HMGB1P48-201ENST00000446155 ADAM33Q9BZ11 813 aa9.99□□□□□ -0.81
HMGB1P48-201ENST00000446155 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
HMGB1P48-201ENST00000446155 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
HMGB1P48-201ENST00000446155 NPDC1Q9NQX5 325 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P48-201ENST00000446155 MAP3K7O43318 606 aa9.97□□□□□ -0.81
HMGB1P48-201ENST00000446155 PTGDRQ13258 359 aa9.97□□□□□ -0.81
HMGB1P48-201ENST00000446155 TSR1Q2NL82 804 aaKnown RBP9.97□□□□□ -0.81
HMGB1P48-201ENST00000446155 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
HMGB1P48-201ENST00000446155 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
HMGB1P48-201ENST00000446155 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
HMGB1P48-201ENST00000446155 FCHSD2O94868 740 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms