RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 BCANQ96GW7 911 aa10.95□□□□□ -0.66
HMGB3P6-201ENST00000444896 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
HMGB3P6-201ENST00000444896 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
HMGB3P6-201ENST00000444896 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
HMGB3P6-201ENST00000444896 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
HMGB3P6-201ENST00000444896 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
HMGB3P6-201ENST00000444896 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
HMGB3P6-201ENST00000444896 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
HMGB3P6-201ENST00000444896 KIF3CO14782 793 aa10.87□□□□□ -0.67
HMGB3P6-201ENST00000444896 E2F4Q16254 413 aa10.87□□□□□ -0.67
HMGB3P6-201ENST00000444896 LHX8Q68G74 356 aa10.87□□□□□ -0.67
HMGB3P6-201ENST00000444896 MAMSTRQ6ZN01 415 aa10.87□□□□□ -0.67
HMGB3P6-201ENST00000444896 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
HMGB3P6-201ENST00000444896 P3H3Q8IVL6 736 aa10.85□□□□□ -0.67
HMGB3P6-201ENST00000444896 C2orf72A6NCS6 295 aa10.84□□□□□ -0.67
HMGB3P6-201ENST00000444896 CAMK2BQ13554 666 aa10.84□□□□□ -0.67
HMGB3P6-201ENST00000444896 DSG2Q14126 1118 aa10.84□□□□□ -0.67
HMGB3P6-201ENST00000444896 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
HMGB3P6-201ENST00000444896 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
HMGB3P6-201ENST00000444896 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
HMGB3P6-201ENST00000444896 FOXK1P85037 733 aa10.82□□□□□ -0.68
HMGB3P6-201ENST00000444896 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
HMGB3P6-201ENST00000444896 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
HMGB3P6-201ENST00000444896 NBR1Q14596 966 aa10.81□□□□□ -0.68
HMGB3P6-201ENST00000444896 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
HMGB3P6-201ENST00000444896 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
HMGB3P6-201ENST00000444896 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
HMGB3P6-201ENST00000444896 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
HMGB3P6-201ENST00000444896 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
HMGB3P6-201ENST00000444896 SEMA3EO15041 775 aa10.69□□□□□ -0.7
HMGB3P6-201ENST00000444896 DPYSL4O14531 572 aa10.67□□□□□ -0.7
HMGB3P6-201ENST00000444896 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
HMGB3P6-201ENST00000444896 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
HMGB3P6-201ENST00000444896 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
HMGB3P6-201ENST00000444896 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
HMGB3P6-201ENST00000444896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGB3P6-201ENST00000444896 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGB3P6-201ENST00000444896 PDIA6Q15084 440 aa10.61□□□□□ -0.71
HMGB3P6-201ENST00000444896 SNPHO15079 494 aa10.6□□□□□ -0.71
HMGB3P6-201ENST00000444896 SLC34A2O95436 690 aa10.6□□□□□ -0.71
HMGB3P6-201ENST00000444896 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
HMGB3P6-201ENST00000444896 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
HMGB3P6-201ENST00000444896 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
HMGB3P6-201ENST00000444896 SPDYE16A6NNV3 312 aaPredicted RBP10.59□□□□□ -0.71
HMGB3P6-201ENST00000444896 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
HMGB3P6-201ENST00000444896 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
HMGB3P6-201ENST00000444896 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
HMGB3P6-201ENST00000444896 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
HMGB3P6-201ENST00000444896 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
HMGB3P6-201ENST00000444896 TBC1D12O60347 775 aa10.53□□□□□ -0.72
HMGB3P6-201ENST00000444896 EVI5O60447 810 aa10.53□□□□□ -0.72
HMGB3P6-201ENST00000444896 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
HMGB3P6-201ENST00000444896 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
HMGB3P6-201ENST00000444896 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
HMGB3P6-201ENST00000444896 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
HMGB3P6-201ENST00000444896 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
HMGB3P6-201ENST00000444896 PTGER2P43116 358 aa10.5□□□□□ -0.73
HMGB3P6-201ENST00000444896 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
HMGB3P6-201ENST00000444896 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
HMGB3P6-201ENST00000444896 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
HMGB3P6-201ENST00000444896 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
HMGB3P6-201ENST00000444896 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMGB3P6-201ENST00000444896 OSBPP22059 807 aa10.45□□□□□ -0.74
HMGB3P6-201ENST00000444896 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
HMGB3P6-201ENST00000444896 GPR153Q6NV75 609 aa10.45□□□□□ -0.74
HMGB3P6-201ENST00000444896 DDX12PQ92771 950 aa10.45□□□□□ -0.74
HMGB3P6-201ENST00000444896 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
HMGB3P6-201ENST00000444896 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
HMGB3P6-201ENST00000444896 ZSWIM6Q9HCJ5 1215 aa10.43□□□□□ -0.74
HMGB3P6-201ENST00000444896 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
HMGB3P6-201ENST00000444896 NUDT7P0C024 238 aa10.41□□□□□ -0.74
HMGB3P6-201ENST00000444896 PHF14O94880 888 aa10.38□□□□□ -0.75
HMGB3P6-201ENST00000444896 PCDHGA10Q9Y5H3 936 aa10.38□□□□□ -0.75
HMGB3P6-201ENST00000444896 GPR37O15354 613 aa10.36□□□□□ -0.75
HMGB3P6-201ENST00000444896 ST18O60284 1047 aa10.36□□□□□ -0.75
HMGB3P6-201ENST00000444896 ZMYND10O75800 440 aa10.36□□□□□ -0.75
HMGB3P6-201ENST00000444896 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
HMGB3P6-201ENST00000444896 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
HMGB3P6-201ENST00000444896 FOSBP53539 338 aa10.34□□□□□ -0.75
HMGB3P6-201ENST00000444896 EMP3P54852 163 aa10.34□□□□□ -0.75
HMGB3P6-201ENST00000444896 EPAS1Q99814 870 aa10.34□□□□□ -0.75
HMGB3P6-201ENST00000444896 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
HMGB3P6-201ENST00000444896 LHX6Q9UPM6 363 aa10.33□□□□□ -0.76
HMGB3P6-201ENST00000444896 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
HMGB3P6-201ENST00000444896 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
HMGB3P6-201ENST00000444896 NUTM2FA1L443 756 aa10.31□□□□□ -0.76
HMGB3P6-201ENST00000444896 TYW1BQ6NUM6 668 aa10.31□□□□□ -0.76
HMGB3P6-201ENST00000444896 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
HMGB3P6-201ENST00000444896 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
HMGB3P6-201ENST00000444896 ERBB3P21860 1342 aa10.3□□□□□ -0.76
HMGB3P6-201ENST00000444896 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
HMGB3P6-201ENST00000444896 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
HMGB3P6-201ENST00000444896 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
HMGB3P6-201ENST00000444896 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
HMGB3P6-201ENST00000444896 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
HMGB3P6-201ENST00000444896 ZDHHC16Q969W1 377 aa10.28□□□□□ -0.76
HMGB3P6-201ENST00000444896 NPDC1Q9NQX5 325 aaPredicted RBP10.28□□□□□ -0.76
HMGB3P6-201ENST00000444896 PTGDRQ13258 359 aa10.27□□□□□ -0.77
HMGB3P6-201ENST00000444896 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
HMGB3P6-201ENST00000444896 MAP3K7O43318 606 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms