RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 KIF14Q15058 1648 aa32.69■■■□□ 2.82
EDEM1-203ENST00000443790 SCAPERQ9BY12 1400 aa32.68■■■□□ 2.82
EDEM1-203ENST00000443790 TROQ12816 1431 aaPredicted RBP32.67■■■□□ 2.82
EDEM1-203ENST00000443790 LRRIQ1Q96JM4 1722 aa32.65■■■□□ 2.82
EDEM1-203ENST00000443790 RIMS1Q86UR5 1692 aaKnown RBP32.64■■■□□ 2.82
EDEM1-203ENST00000443790 SIGLEC1Q9BZZ2 1709 aa32.64■■■□□ 2.82
EDEM1-203ENST00000443790 CLIP1P30622 1438 aa32.61■■■□□ 2.81
EDEM1-203ENST00000443790 EFCAB2Q5VUJ9 269 aa32.61■■■□□ 2.81
EDEM1-203ENST00000443790 PCF11O94913 1555 aaKnown RBP32.58■■■□□ 2.81
EDEM1-203ENST00000443790 ARHGAP5Q13017 1502 aa32.56■■■□□ 2.8
EDEM1-203ENST00000443790 CASKIN1Q8WXD9 1431 aa32.54■■■□□ 2.8
EDEM1-203ENST00000443790 CCDC18Q5T9S5 1454 aa32.53■■■□□ 2.8
EDEM1-203ENST00000443790 LMTK3Q96Q04 1460 aa32.53■■■□□ 2.8
EDEM1-203ENST00000443790 ZNF518AQ6AHZ1 1483 aa32.51■■■□□ 2.79
EDEM1-203ENST00000443790 ATP10AO60312 1499 aa32.5■■■□□ 2.79
EDEM1-203ENST00000443790 C9orf84Q5VXU9 1444 aa32.49■■■□□ 2.79
EDEM1-203ENST00000443790 KDM5CP41229 1560 aa32.49■■■□□ 2.79
EDEM1-203ENST00000443790 FER1L4A9Z1Z3 1794 aa32.47■■■□□ 2.79
EDEM1-203ENST00000443790 CDC42BPBQ9Y5S2 1711 aa32.46■■■□□ 2.79
EDEM1-203ENST00000443790 MLECQ14165 292 aa32.45■■■□□ 2.79
EDEM1-203ENST00000443790 PREX2Q70Z35 1606 aa32.44■■■□□ 2.78
EDEM1-203ENST00000443790 FYCO1Q9BQS8 1478 aa32.43■■■□□ 2.78
EDEM1-203ENST00000443790 ARHGEF12Q9NZN5 1544 aa32.42■■■□□ 2.78
EDEM1-203ENST00000443790 AFAP1Q8N556 730 aa32.4■■■□□ 2.78
EDEM1-203ENST00000443790 PLPPR3Q6T4P5 718 aa32.39■■■□□ 2.78
EDEM1-203ENST00000443790 ABCC1P33527 1531 aa32.37■■■□□ 2.77
EDEM1-203ENST00000443790 DIP2CQ9Y2E4 1556 aa32.36■■■□□ 2.77
EDEM1-203ENST00000443790 MLH3Q9UHC1 1453 aa32.33■■■□□ 2.77
EDEM1-203ENST00000443790 REREQ9P2R6 1566 aa32.32■■■□□ 2.77
EDEM1-203ENST00000443790 CDC42BPAQ5VT25 1732 aa32.32■■■□□ 2.76
EDEM1-203ENST00000443790 ITSN2Q9NZM3 1697 aa32.32■■■□□ 2.76
EDEM1-203ENST00000443790 ABCA6Q8N139 1617 aa32.31■■■□□ 2.76
EDEM1-203ENST00000443790 TRAPPC8Q9Y2L5 1435 aa32.31■■■□□ 2.76
EDEM1-203ENST00000443790 HSPA2P54652 639 aa32.3■■■□□ 2.76
EDEM1-203ENST00000443790 MYT1LQ9UL68 1186 aa32.3■■■□□ 2.76
EDEM1-203ENST00000443790 FBXO41Q8TF61 875 aa32.22■■■□□ 2.75
EDEM1-203ENST00000443790 PREX1Q8TCU6 1659 aa32.21■■■□□ 2.75
EDEM1-203ENST00000443790 AGLP35573 1532 aa32.21■■■□□ 2.75
EDEM1-203ENST00000443790 SAMD9LQ8IVG5 1584 aa32.2■■■□□ 2.75
EDEM1-203ENST00000443790 KIDINS220Q9ULH0 1771 aa32.2■■■□□ 2.75
EDEM1-203ENST00000443790 GPATCH8Q9UKJ3 1502 aaKnown RBP32.19■■■□□ 2.74
EDEM1-203ENST00000443790 CEBPAP49715 358 aaPredicted RBP32.18■■■□□ 2.74
EDEM1-203ENST00000443790 SYCP2Q9BX26 1530 aa32.16■■■□□ 2.74
EDEM1-203ENST00000443790 ZNF777Q9ULD5 760 aaPredicted RBP32.14■■■□□ 2.74
EDEM1-203ENST00000443790 C3P01024 1663 aa32.08■■■□□ 2.73
EDEM1-203ENST00000443790 MTUS2Q5JR59 1369 aa32.08■■■□□ 2.73
EDEM1-203ENST00000443790 UHRF1BP1Q6BDS2 1440 aa32.07■■■□□ 2.72
EDEM1-203ENST00000443790 CCNB3Q8WWL7 1395 aa32.07■■■□□ 2.72
EDEM1-203ENST00000443790 PLEKHH2Q8IVE3 1493 aa32.06■■■□□ 2.72
EDEM1-203ENST00000443790 KIAA1107Q9UPP5 1409 aa32.06■■■□□ 2.72
EDEM1-203ENST00000443790 CFDP1Q9UEE9 299 aaPredicted RBP32.05■■■□□ 2.72
EDEM1-203ENST00000443790 SPAG9O60271 1321 aaKnown RBP32.04■■■□□ 2.72
EDEM1-203ENST00000443790 HNRNPMP52272 730 aaKnown RBP eCLIP32.04■■■□□ 2.72
EDEM1-203ENST00000443790 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
EDEM1-203ENST00000443790 ATP7AQ04656 1500 aa32.02■■■□□ 2.72
EDEM1-203ENST00000443790 SETD1BQ9UPS6 1966 aaKnown RBP32.02■■■□□ 2.72
EDEM1-203ENST00000443790 CEP162Q5TB80 1403 aa32.01■■■□□ 2.72
EDEM1-203ENST00000443790 CNTLNQ9NXG0 1405 aa32.01■■■□□ 2.72
EDEM1-203ENST00000443790 EHBP1L1Q8N3D4 1523 aa32.01■■■□□ 2.72
EDEM1-203ENST00000443790 INO80Q9ULG1 1556 aaPredicted RBP32.01■■■□□ 2.71
EDEM1-203ENST00000443790 TIAM1Q13009 1591 aa31.99■■■□□ 2.71
EDEM1-203ENST00000443790 STRCQ7RTU9 1775 aa31.96■■■□□ 2.71
EDEM1-203ENST00000443790 PLXNC1O60486 1568 aa31.95■■■□□ 2.71
EDEM1-203ENST00000443790 SUPT6HQ7KZ85 1726 aaKnown RBP31.95■■■□□ 2.7
EDEM1-203ENST00000443790 MROH2AA6NES4 1674 aa31.93■■■□□ 2.7
EDEM1-203ENST00000443790 A2MP01023 1474 aa31.91■■■□□ 2.7
EDEM1-203ENST00000443790 CERKQ8TCT0 537 aa31.91■■■□□ 2.7
EDEM1-203ENST00000443790 DMRT2Q9Y5R5 561 aa31.88■■■□□ 2.69
EDEM1-203ENST00000443790 ZNF644Q9H582 1327 aaPredicted RBP31.87■■■□□ 2.69
EDEM1-203ENST00000443790 MBD5Q9P267 1494 aa31.86■■■□□ 2.69
EDEM1-203ENST00000443790 NPATQ14207 1427 aa31.85■■■□□ 2.69
EDEM1-203ENST00000443790 ADGBQ8N7X0 1667 aa31.85■■■□□ 2.69
EDEM1-203ENST00000443790 ZMYM3Q14202 1370 aa31.83■■■□□ 2.69
EDEM1-203ENST00000443790 CLTCQ00610 1675 aaKnown RBP31.83■■■□□ 2.69
EDEM1-203ENST00000443790 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
EDEM1-203ENST00000443790 PTPRTO14522 1441 aa31.8■■■□□ 2.68
EDEM1-203ENST00000443790 RTEL1-TNFRSF6BF6WH68 1400 aa31.78■■■□□ 2.68
EDEM1-203ENST00000443790 NCOA1Q15788 1441 aa31.77■■■□□ 2.68
EDEM1-203ENST00000443790 GGT6Q6P531 493 aa31.75■■■□□ 2.67
EDEM1-203ENST00000443790 CAMSAP2Q08AD1 1489 aa31.73■■■□□ 2.67
EDEM1-203ENST00000443790 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
EDEM1-203ENST00000443790 PTPRKQ15262 1439 aa31.71■■■□□ 2.67
EDEM1-203ENST00000443790 CAMSAP1Q5T5Y3 1602 aa31.71■■■□□ 2.67
EDEM1-203ENST00000443790 MYO3AQ8NEV4 1616 aa31.71■■■□□ 2.67
EDEM1-203ENST00000443790 PPP6R1Q9UPN7 881 aa31.7■■■□□ 2.67
EDEM1-203ENST00000443790 ZNF142P52746 1687 aaPredicted RBP31.7■■■□□ 2.66
EDEM1-203ENST00000443790 VPS8Q8N3P4 1428 aa31.69■■■□□ 2.66
EDEM1-203ENST00000443790 DHX29Q7Z478 1369 aaKnown RBP31.68■■■□□ 2.66
EDEM1-203ENST00000443790 CEP170BQ9Y4F5 1589 aaPredicted RBP31.64■■■□□ 2.66
EDEM1-203ENST00000443790 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
EDEM1-203ENST00000443790 LRRC9Q6ZRR7 1453 aa31.63■■■□□ 2.65
EDEM1-203ENST00000443790 ARHGEF5Q12774 1597 aa31.63■■■□□ 2.65
EDEM1-203ENST00000443790 LOC105371045A0A1W2PR82 267 aa31.62■■■□□ 2.65
EDEM1-203ENST00000443790 LTBP4Q8N2S1 1624 aa31.62■■■□□ 2.65
EDEM1-203ENST00000443790 PLA2R1Q13018 1463 aa31.59■■■□□ 2.65
EDEM1-203ENST00000443790 FAM135AQ9P2D6 1515 aa31.58■■■□□ 2.65
EDEM1-203ENST00000443790 KIF3BO15066 747 aa31.57■■■□□ 2.64
EDEM1-203ENST00000443790 KDM5DQ9BY66 1539 aa31.55■■■□□ 2.64
EDEM1-203ENST00000443790 NCKAP5LQ9HCH0 1330 aa31.54■■■□□ 2.64
EDEM1-203ENST00000443790 TCOF1Q13428 1488 aaKnown RBP31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms