RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEFMP1-201ENST00000443423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.05□□□□□ -1.12
NEFMP1-201ENST00000443423 ZFP91Q96JP5 570 aaPredicted RBP8.05□□□□□ -1.12
NEFMP1-201ENST00000443423 ZSWIM6Q9HCJ5 1215 aa8.05□□□□□ -1.12
NEFMP1-201ENST00000443423 SOX12O15370 315 aa8.03□□□□□ -1.12
NEFMP1-201ENST00000443423 ARSIQ5FYB1 569 aa8.03□□□□□ -1.12
NEFMP1-201ENST00000443423 MYT1LQ9UL68 1186 aa8.03□□□□□ -1.12
NEFMP1-201ENST00000443423 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
NEFMP1-201ENST00000443423 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
NEFMP1-201ENST00000443423 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
NEFMP1-201ENST00000443423 TRIM41Q8WV44 630 aa8.01□□□□□ -1.13
NEFMP1-201ENST00000443423 RIMBP2O15034 1052 aa8□□□□□ -1.13
NEFMP1-201ENST00000443423 KIF3CO14782 793 aa7.99□□□□□ -1.13
NEFMP1-201ENST00000443423 ECM2O94769 699 aaPredicted RBP7.98□□□□□ -1.13
NEFMP1-201ENST00000443423 ZNF316A6NFI3 1004 aaPredicted RBP7.96□□□□□ -1.14
NEFMP1-201ENST00000443423 DCAF8L2P0C7V8 631 aa7.96□□□□□ -1.14
NEFMP1-201ENST00000443423 VGFO15240 615 aaPredicted RBP7.95□□□□□ -1.14
NEFMP1-201ENST00000443423 MFRPQ9BY79 579 aa7.95□□□□□ -1.14
NEFMP1-201ENST00000443423 LSM11P83369 360 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEFMP1-201ENST00000443423 C2orf72A6NCS6 295 aa7.92□□□□□ -1.14
NEFMP1-201ENST00000443423 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
NEFMP1-201ENST00000443423 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
NEFMP1-201ENST00000443423 RGL2O15211 777 aa7.9□□□□□ -1.14
NEFMP1-201ENST00000443423 BCL11BQ9C0K0 894 aaPredicted RBP7.9□□□□□ -1.14
NEFMP1-201ENST00000443423 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
NEFMP1-201ENST00000443423 NUDT7P0C024 238 aa7.89□□□□□ -1.15
NEFMP1-201ENST00000443423 PTGER2P43116 358 aa7.89□□□□□ -1.15
NEFMP1-201ENST00000443423 NLRP6P59044 892 aa7.89□□□□□ -1.15
NEFMP1-201ENST00000443423 AXIN2Q9Y2T1 843 aa7.89□□□□□ -1.15
NEFMP1-201ENST00000443423 LHX6Q9UPM6 363 aa7.88□□□□□ -1.15
NEFMP1-201ENST00000443423 SLC34A2O95436 690 aa7.85□□□□□ -1.15
NEFMP1-201ENST00000443423 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
NEFMP1-201ENST00000443423 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
NEFMP1-201ENST00000443423 PPP1R37O75864 691 aa7.83□□□□□ -1.16
NEFMP1-201ENST00000443423 STK24Q9Y6E0 443 aa7.83□□□□□ -1.16
NEFMP1-201ENST00000443423 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.82□□□□□ -1.16
NEFMP1-201ENST00000443423 PBX2P40425 430 aa7.81□□□□□ -1.16
NEFMP1-201ENST00000443423 HRO43593 1189 aa7.78□□□□□ -1.16
NEFMP1-201ENST00000443423 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
NEFMP1-201ENST00000443423 STK25O00506 426 aa7.77□□□□□ -1.17
NEFMP1-201ENST00000443423 CHGAP10645 457 aaKnown RBP7.77□□□□□ -1.17
NEFMP1-201ENST00000443423 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
NEFMP1-201ENST00000443423 TAOK2Q9UL54 1235 aa7.77□□□□□ -1.17
NEFMP1-201ENST00000443423 HAP1P54257 671 aaPredicted RBP7.76□□□□□ -1.17
NEFMP1-201ENST00000443423 HS6ST3Q8IZP7 471 aa7.76□□□□□ -1.17
NEFMP1-201ENST00000443423 PLA2G2EQ9NZK7 142 aa7.76□□□□□ -1.17
NEFMP1-201ENST00000443423 ARHGAP33O14559 1287 aa7.74□□□□□ -1.17
NEFMP1-201ENST00000443423 PSEN2P49810 448 aa7.74□□□□□ -1.17
NEFMP1-201ENST00000443423 PTCD2Q8WV60 388 aaKnown RBP7.74□□□□□ -1.17
NEFMP1-201ENST00000443423 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
NEFMP1-201ENST00000443423 PAXIP1Q6ZW49 1069 aaPredicted RBP7.73□□□□□ -1.17
NEFMP1-201ENST00000443423 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
NEFMP1-201ENST00000443423 HCSTQ9UBK5 93 aa7.72□□□□□ -1.17
NEFMP1-201ENST00000443423 VSIG10Q8N0Z9 540 aa7.7□□□□□ -1.18
NEFMP1-201ENST00000443423 TMC2Q8TDI7 906 aa7.7□□□□□ -1.18
NEFMP1-201ENST00000443423 CFAP44Q96MT7 982 aa7.7□□□□□ -1.18
NEFMP1-201ENST00000443423 TK2O00142 265 aa7.69□□□□□ -1.18
NEFMP1-201ENST00000443423 FOXK1P85037 733 aa7.68□□□□□ -1.18
NEFMP1-201ENST00000443423 DSG2Q14126 1118 aa7.66□□□□□ -1.18
NEFMP1-201ENST00000443423 PLPP6Q8IY26 295 aa7.66□□□□□ -1.18
NEFMP1-201ENST00000443423 GPHNQ9NQX3 736 aaPredicted RBP7.65□□□□□ -1.18
NEFMP1-201ENST00000443423 PSDA5PKW4 1024 aaPredicted RBP7.64□□□□□ -1.19
NEFMP1-201ENST00000443423 KCTD12Q96CX2 325 aaKnown RBP7.63□□□□□ -1.19
NEFMP1-201ENST00000443423 NKX1-1Q15270 411 aaPredicted RBP7.62□□□□□ -1.19
NEFMP1-201ENST00000443423 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
NEFMP1-201ENST00000443423 BHMG1C9JSJ3 638 aaPredicted RBP7.6□□□□□ -1.19
NEFMP1-201ENST00000443423 OXER1Q8TDS5 423 aa7.6□□□□□ -1.19
NEFMP1-201ENST00000443423 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
NEFMP1-201ENST00000443423 GTPBP6O43824 516 aaPredicted RBP7.59□□□□□ -1.19
NEFMP1-201ENST00000443423 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
NEFMP1-201ENST00000443423 KDM2AQ9Y2K7 1162 aa7.59□□□□□ -1.19
NEFMP1-201ENST00000443423 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
NEFMP1-201ENST00000443423 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
NEFMP1-201ENST00000443423 IFFO2Q5TF58 517 aa7.55□□□□□ -1.2
NEFMP1-201ENST00000443423 SLC4A5Q9BY07 1137 aa7.55□□□□□ -1.2
NEFMP1-201ENST00000443423 CRISPLD2Q9H0B8 497 aa7.55□□□□□ -1.2
NEFMP1-201ENST00000443423 PTPN5P54829 565 aa7.54□□□□□ -1.2
NEFMP1-201ENST00000443423 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
NEFMP1-201ENST00000443423 FOSBP53539 338 aa7.53□□□□□ -1.2
NEFMP1-201ENST00000443423 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
NEFMP1-201ENST00000443423 BCANQ96GW7 911 aa7.53□□□□□ -1.2
NEFMP1-201ENST00000443423 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
NEFMP1-201ENST00000443423 NCKAP5LQ9HCH0 1330 aa7.52□□□□□ -1.21
NEFMP1-201ENST00000443423 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
NEFMP1-201ENST00000443423 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEFMP1-201ENST00000443423 ANO8Q9HCE9 1232 aaPredicted RBP7.51□□□□□ -1.21
NEFMP1-201ENST00000443423 A0A0G2JS52 829 aa7.49□□□□□ -1.21
NEFMP1-201ENST00000443423 TBC1D12O60347 775 aa7.49□□□□□ -1.21
NEFMP1-201ENST00000443423 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
NEFMP1-201ENST00000443423 RGS20O76081 388 aa7.47□□□□□ -1.21
NEFMP1-201ENST00000443423 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.22
NEFMP1-201ENST00000443423 WNT2BQ93097 391 aa7.44□□□□□ -1.22
NEFMP1-201ENST00000443423 JPH4Q96JJ6 628 aa7.44□□□□□ -1.22
NEFMP1-201ENST00000443423 PTPREP23469 700 aa7.43□□□□□ -1.22
NEFMP1-201ENST00000443423 EVI5O60447 810 aa7.42□□□□□ -1.22
NEFMP1-201ENST00000443423 COL9A1P20849 921 aa7.42□□□□□ -1.22
NEFMP1-201ENST00000443423 STAC3Q96MF2 364 aa7.42□□□□□ -1.22
NEFMP1-201ENST00000443423 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
NEFMP1-201ENST00000443423 LCE2BO14633 110 aa7.41□□□□□ -1.22
NEFMP1-201ENST00000443423 PROX2Q3B8N5 592 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms