RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 ARHGAP5Q13017 1502 aa24.07■■□□□ 1.44
MCF2L-217ENST00000441756 PLCH2O75038 1416 aa24.07■■□□□ 1.44
MCF2L-217ENST00000441756 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
MCF2L-217ENST00000441756 CAMSAP2Q08AD1 1489 aa24.06■■□□□ 1.44
MCF2L-217ENST00000441756 GLI2P10070 1586 aa24.04■■□□□ 1.44
MCF2L-217ENST00000441756 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
MCF2L-217ENST00000441756 CFAP74Q9C0B2 1584 aa24■■□□□ 1.43
MCF2L-217ENST00000441756 DIP2BQ9P265 1576 aa24■■□□□ 1.43
MCF2L-217ENST00000441756 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
MCF2L-217ENST00000441756 ZNF777Q9ULD5 760 aaPredicted RBP23.99■■□□□ 1.43
MCF2L-217ENST00000441756 SAMD9LQ8IVG5 1584 aa23.98■■□□□ 1.43
MCF2L-217ENST00000441756 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
MCF2L-217ENST00000441756 CD109Q6YHK3 1445 aa23.97■■□□□ 1.43
MCF2L-217ENST00000441756 MAP3K4Q9Y6R4 1608 aa23.96■■□□□ 1.43
MCF2L-217ENST00000441756 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.42
MCF2L-217ENST00000441756 FANCAO15360 1455 aa23.94■■□□□ 1.42
MCF2L-217ENST00000441756 ITGAEP38570 1179 aa23.93■■□□□ 1.42
MCF2L-217ENST00000441756 DAPK1P53355 1430 aa23.93■■□□□ 1.42
MCF2L-217ENST00000441756 KIAA1107Q9UPP5 1409 aa23.93■■□□□ 1.42
MCF2L-217ENST00000441756 ZNF644Q9H582 1327 aaPredicted RBP23.92■■□□□ 1.42
MCF2L-217ENST00000441756 ABCC1P33527 1531 aa23.91■■□□□ 1.42
MCF2L-217ENST00000441756 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
MCF2L-217ENST00000441756 RSPH4AQ5TD94 716 aa23.9■■□□□ 1.42
MCF2L-217ENST00000441756 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.42
MCF2L-217ENST00000441756 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
MCF2L-217ENST00000441756 SHANK2Q9UPX8 1470 aa23.88■■□□□ 1.41
MCF2L-217ENST00000441756 FAM69CQ0P6D2 419 aa23.88■■□□□ 1.41
MCF2L-217ENST00000441756 NEO1Q92859 1461 aa23.87■■□□□ 1.41
MCF2L-217ENST00000441756 ABCC5O15440 1437 aa23.87■■□□□ 1.41
MCF2L-217ENST00000441756 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
MCF2L-217ENST00000441756 MBD5Q9P267 1494 aa23.85■■□□□ 1.41
MCF2L-217ENST00000441756 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
MCF2L-217ENST00000441756 ADGRL1O94910 1474 aa23.84■■□□□ 1.41
MCF2L-217ENST00000441756 TEX14Q8IWB6 1497 aa23.84■■□□□ 1.41
MCF2L-217ENST00000441756 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
MCF2L-217ENST00000441756 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
MCF2L-217ENST00000441756 PTPRKQ15262 1439 aa23.82■■□□□ 1.4
MCF2L-217ENST00000441756 HFM1A2PYH4 1435 aa23.8■■□□□ 1.4
MCF2L-217ENST00000441756 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
MCF2L-217ENST00000441756 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
MCF2L-217ENST00000441756 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
MCF2L-217ENST00000441756 ADGRL2O95490 1459 aa23.8■■□□□ 1.4
MCF2L-217ENST00000441756 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
MCF2L-217ENST00000441756 C9orf84Q5VXU9 1444 aa23.79■■□□□ 1.4
MCF2L-217ENST00000441756 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
MCF2L-217ENST00000441756 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
MCF2L-217ENST00000441756 SETD5Q9C0A6 1442 aa23.77■■□□□ 1.4
MCF2L-217ENST00000441756 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
MCF2L-217ENST00000441756 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
MCF2L-217ENST00000441756 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
MCF2L-217ENST00000441756 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
MCF2L-217ENST00000441756 PPRC1Q5VV67 1664 aaKnown RBP23.73■■□□□ 1.39
MCF2L-217ENST00000441756 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
MCF2L-217ENST00000441756 NAIPQ13075 1403 aa23.72■■□□□ 1.39
MCF2L-217ENST00000441756 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
MCF2L-217ENST00000441756 PLXNC1O60486 1568 aa23.71■■□□□ 1.39
MCF2L-217ENST00000441756 POGZQ7Z3K3 1410 aa23.71■■□□□ 1.39
MCF2L-217ENST00000441756 DENND4BO75064 1496 aaPredicted RBP23.7■■□□□ 1.38
MCF2L-217ENST00000441756 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
MCF2L-217ENST00000441756 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
MCF2L-217ENST00000441756 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
MCF2L-217ENST00000441756 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
MCF2L-217ENST00000441756 HRCP23327 699 aa23.68■■□□□ 1.38
MCF2L-217ENST00000441756 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
MCF2L-217ENST00000441756 KDM5CP41229 1560 aa23.67■■□□□ 1.38
MCF2L-217ENST00000441756 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
MCF2L-217ENST00000441756 ZFYVE16Q7Z3T8 1539 aa23.66■■□□□ 1.38
MCF2L-217ENST00000441756 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
MCF2L-217ENST00000441756 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
MCF2L-217ENST00000441756 KIF15Q9NS87 1388 aa23.64■■□□□ 1.37
MCF2L-217ENST00000441756 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
MCF2L-217ENST00000441756 HECW2Q9P2P5 1572 aa23.62■■□□□ 1.37
MCF2L-217ENST00000441756 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
MCF2L-217ENST00000441756 RICTORQ6R327 1708 aa23.62■■□□□ 1.37
MCF2L-217ENST00000441756 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
MCF2L-217ENST00000441756 MLH3Q9UHC1 1453 aa23.6■■□□□ 1.37
MCF2L-217ENST00000441756 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
MCF2L-217ENST00000441756 ZMYM4Q5VZL5 1548 aa23.58■■□□□ 1.36
MCF2L-217ENST00000441756 MYT1LQ9UL68 1186 aa23.57■■□□□ 1.36
MCF2L-217ENST00000441756 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
MCF2L-217ENST00000441756 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
MCF2L-217ENST00000441756 KIDINS220Q9ULH0 1771 aa23.55■■□□□ 1.36
MCF2L-217ENST00000441756 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
MCF2L-217ENST00000441756 KDM6BO15054 1643 aa23.51■■□□□ 1.35
MCF2L-217ENST00000441756 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
MCF2L-217ENST00000441756 CCER1Q8TC90 406 aaPredicted RBP23.51■■□□□ 1.35
MCF2L-217ENST00000441756 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
MCF2L-217ENST00000441756 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
MCF2L-217ENST00000441756 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
MCF2L-217ENST00000441756 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
MCF2L-217ENST00000441756 A2MP01023 1474 aa23.45■■□□□ 1.34
MCF2L-217ENST00000441756 DHX29Q7Z478 1369 aaKnown RBP23.45■■□□□ 1.34
MCF2L-217ENST00000441756 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
MCF2L-217ENST00000441756 UNC13BO14795 1591 aa23.44■■□□□ 1.34
MCF2L-217ENST00000441756 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
MCF2L-217ENST00000441756 KDM5DQ9BY66 1539 aa23.42■■□□□ 1.34
MCF2L-217ENST00000441756 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-217ENST00000441756 ARHGEF40Q8TER5 1519 aa23.39■■□□□ 1.34
MCF2L-217ENST00000441756 YEATS2Q9ULM3 1422 aa23.38■■□□□ 1.33
MCF2L-217ENST00000441756 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms