RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 EFCAB2Q5VUJ9 269 aa20.5■□□□□ 0.87
ZNF3-209ENST00000441298 POGZQ7Z3K3 1410 aa20.48■□□□□ 0.87
ZNF3-209ENST00000441298 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
ZNF3-209ENST00000441298 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
ZNF3-209ENST00000441298 ZFYVE16Q7Z3T8 1539 aa20.47■□□□□ 0.87
ZNF3-209ENST00000441298 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
ZNF3-209ENST00000441298 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
ZNF3-209ENST00000441298 MTUS2Q5JR59 1369 aa20.45■□□□□ 0.86
ZNF3-209ENST00000441298 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
ZNF3-209ENST00000441298 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
ZNF3-209ENST00000441298 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
ZNF3-209ENST00000441298 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
ZNF3-209ENST00000441298 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
ZNF3-209ENST00000441298 BCORL1Q5H9F3 1711 aa20.39■□□□□ 0.85
ZNF3-209ENST00000441298 ABCC1P33527 1531 aa20.38■□□□□ 0.85
ZNF3-209ENST00000441298 EHBP1L1Q8N3D4 1523 aa20.38■□□□□ 0.85
ZNF3-209ENST00000441298 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
ZNF3-209ENST00000441298 ITSN2Q9NZM3 1697 aa20.37■□□□□ 0.85
ZNF3-209ENST00000441298 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
ZNF3-209ENST00000441298 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
ZNF3-209ENST00000441298 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
ZNF3-209ENST00000441298 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
ZNF3-209ENST00000441298 CCNB3Q8WWL7 1395 aa20.35■□□□□ 0.85
ZNF3-209ENST00000441298 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
ZNF3-209ENST00000441298 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
ZNF3-209ENST00000441298 KDM5CP41229 1560 aa20.34■□□□□ 0.85
ZNF3-209ENST00000441298 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
ZNF3-209ENST00000441298 SAMD9LQ8IVG5 1584 aa20.34■□□□□ 0.85
ZNF3-209ENST00000441298 MLECQ14165 292 aa20.33■□□□□ 0.85
ZNF3-209ENST00000441298 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.84
ZNF3-209ENST00000441298 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
ZNF3-209ENST00000441298 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
ZNF3-209ENST00000441298 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
ZNF3-209ENST00000441298 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
ZNF3-209ENST00000441298 C9orf84Q5VXU9 1444 aa20.31■□□□□ 0.84
ZNF3-209ENST00000441298 CFDP1Q9UEE9 299 aaPredicted RBP20.31■□□□□ 0.84
ZNF3-209ENST00000441298 ATP10AO60312 1499 aa20.3■□□□□ 0.84
ZNF3-209ENST00000441298 PTPRMP28827 1452 aa20.3■□□□□ 0.84
ZNF3-209ENST00000441298 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
ZNF3-209ENST00000441298 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
ZNF3-209ENST00000441298 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
ZNF3-209ENST00000441298 DIP2CQ9Y2E4 1556 aa20.28■□□□□ 0.84
ZNF3-209ENST00000441298 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
ZNF3-209ENST00000441298 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
ZNF3-209ENST00000441298 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
ZNF3-209ENST00000441298 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
ZNF3-209ENST00000441298 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
ZNF3-209ENST00000441298 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
ZNF3-209ENST00000441298 LRRC9Q6ZRR7 1453 aa20.2■□□□□ 0.82
ZNF3-209ENST00000441298 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
ZNF3-209ENST00000441298 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
ZNF3-209ENST00000441298 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
ZNF3-209ENST00000441298 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
ZNF3-209ENST00000441298 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
ZNF3-209ENST00000441298 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
ZNF3-209ENST00000441298 INO80Q9ULG1 1556 aaPredicted RBP20.16■□□□□ 0.82
ZNF3-209ENST00000441298 APLP2Q06481 763 aa20.15■□□□□ 0.82
ZNF3-209ENST00000441298 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
ZNF3-209ENST00000441298 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
ZNF3-209ENST00000441298 AGLP35573 1532 aa20.1■□□□□ 0.81
ZNF3-209ENST00000441298 MBD5Q9P267 1494 aa20.1■□□□□ 0.81
ZNF3-209ENST00000441298 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
ZNF3-209ENST00000441298 CCDC141Q6ZP82 1450 aa20.09■□□□□ 0.81
ZNF3-209ENST00000441298 A2MP01023 1474 aa20.07■□□□□ 0.8
ZNF3-209ENST00000441298 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
ZNF3-209ENST00000441298 CEBPAP49715 358 aaPredicted RBP20.06■□□□□ 0.8
ZNF3-209ENST00000441298 ADGBQ8N7X0 1667 aa20.06■□□□□ 0.8
ZNF3-209ENST00000441298 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
ZNF3-209ENST00000441298 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
ZNF3-209ENST00000441298 C3P01024 1663 aa20.01■□□□□ 0.79
ZNF3-209ENST00000441298 ARHGEF5Q12774 1597 aa20.01■□□□□ 0.79
ZNF3-209ENST00000441298 HSPA2P54652 639 aa20■□□□□ 0.79
ZNF3-209ENST00000441298 GGT6Q6P531 493 aa19.99■□□□□ 0.79
ZNF3-209ENST00000441298 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
ZNF3-209ENST00000441298 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
ZNF3-209ENST00000441298 MIA2Q96PC5 1412 aa19.98■□□□□ 0.79
ZNF3-209ENST00000441298 CNTLNQ9NXG0 1405 aa19.98■□□□□ 0.79
ZNF3-209ENST00000441298 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
ZNF3-209ENST00000441298 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
ZNF3-209ENST00000441298 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
ZNF3-209ENST00000441298 RSPH4AQ5TD94 716 aa19.96■□□□□ 0.79
ZNF3-209ENST00000441298 PTPN23Q9H3S7 1636 aa19.95■□□□□ 0.78
ZNF3-209ENST00000441298 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
ZNF3-209ENST00000441298 UHRF1BP1Q6BDS2 1440 aa19.93■□□□□ 0.78
ZNF3-209ENST00000441298 DHX29Q7Z478 1369 aaKnown RBP19.93■□□□□ 0.78
ZNF3-209ENST00000441298 KIF3BO15066 747 aa19.91■□□□□ 0.78
ZNF3-209ENST00000441298 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
ZNF3-209ENST00000441298 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
ZNF3-209ENST00000441298 CROCC2H7BZ55 1655 aa19.89■□□□□ 0.77
ZNF3-209ENST00000441298 ZMYM3Q14202 1370 aa19.89■□□□□ 0.77
ZNF3-209ENST00000441298 SETD1BQ9UPS6 1966 aaKnown RBP19.88■□□□□ 0.77
ZNF3-209ENST00000441298 KDM5DQ9BY66 1539 aa19.85■□□□□ 0.77
ZNF3-209ENST00000441298 TCOF1Q13428 1488 aaKnown RBP19.84■□□□□ 0.77
ZNF3-209ENST00000441298 ABCC5O15440 1437 aa19.84■□□□□ 0.77
ZNF3-209ENST00000441298 DAPK1P53355 1430 aa19.84■□□□□ 0.77
ZNF3-209ENST00000441298 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
ZNF3-209ENST00000441298 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
ZNF3-209ENST00000441298 NPATQ14207 1427 aa19.83■□□□□ 0.76
ZNF3-209ENST00000441298 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
ZNF3-209ENST00000441298 MYO3AQ8NEV4 1616 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms