RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 SPRYD3Q8NCJ5 442 aa9.6□□□□□ -0.87
PGBD4P3-201ENST00000440731 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
PGBD4P3-201ENST00000440731 RYDENQ9NUL5 291 aaKnown RBP9.58□□□□□ -0.88
PGBD4P3-201ENST00000440731 PPP1R37O75864 691 aa9.57□□□□□ -0.88
PGBD4P3-201ENST00000440731 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
PGBD4P3-201ENST00000440731 L3MBTL3Q96JM7 780 aaPredicted RBP9.56□□□□□ -0.88
PGBD4P3-201ENST00000440731 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.55□□□□□ -0.88
PGBD4P3-201ENST00000440731 EMP3P54852 163 aa9.54□□□□□ -0.88
PGBD4P3-201ENST00000440731 BOLA1Q9Y3E2 137 aa9.54□□□□□ -0.88
PGBD4P3-201ENST00000440731 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
PGBD4P3-201ENST00000440731 MICALL2Q8IY33 904 aa9.5□□□□□ -0.89
PGBD4P3-201ENST00000440731 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
PGBD4P3-201ENST00000440731 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
PGBD4P3-201ENST00000440731 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
PGBD4P3-201ENST00000440731 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
PGBD4P3-201ENST00000440731 POTEB3A0JP26 581 aa9.46□□□□□ -0.9
PGBD4P3-201ENST00000440731 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
PGBD4P3-201ENST00000440731 POTEBQ6S5H4 581 aa9.46□□□□□ -0.9
PGBD4P3-201ENST00000440731 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
PGBD4P3-201ENST00000440731 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
PGBD4P3-201ENST00000440731 CADPS2Q86UW7 1296 aa9.38□□□□□ -0.91
PGBD4P3-201ENST00000440731 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
PGBD4P3-201ENST00000440731 TMEM92Q6UXU6 159 aa9.37□□□□□ -0.91
PGBD4P3-201ENST00000440731 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
PGBD4P3-201ENST00000440731 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
PGBD4P3-201ENST00000440731 PDE4AP27815 886 aa9.33□□□□□ -0.92
PGBD4P3-201ENST00000440731 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
PGBD4P3-201ENST00000440731 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
PGBD4P3-201ENST00000440731 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
PGBD4P3-201ENST00000440731 DSG2Q14126 1118 aa9.29□□□□□ -0.92
PGBD4P3-201ENST00000440731 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
PGBD4P3-201ENST00000440731 KIF3CO14782 793 aa9.28□□□□□ -0.92
PGBD4P3-201ENST00000440731 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
PGBD4P3-201ENST00000440731 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
PGBD4P3-201ENST00000440731 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
PGBD4P3-201ENST00000440731 FOXK1P85037 733 aa9.25□□□□□ -0.93
PGBD4P3-201ENST00000440731 PPP1R15BQ5SWA1 713 aa9.25□□□□□ -0.93
PGBD4P3-201ENST00000440731 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
PGBD4P3-201ENST00000440731 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
PGBD4P3-201ENST00000440731 ERBB3P21860 1342 aa9.22□□□□□ -0.93
PGBD4P3-201ENST00000440731 DOK7Q18PE1 504 aa9.21□□□□□ -0.94
PGBD4P3-201ENST00000440731 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
PGBD4P3-201ENST00000440731 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
PGBD4P3-201ENST00000440731 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
PGBD4P3-201ENST00000440731 MFSD10Q14728 455 aa9.19□□□□□ -0.94
PGBD4P3-201ENST00000440731 KDM2AQ9Y2K7 1162 aa9.19□□□□□ -0.94
PGBD4P3-201ENST00000440731 RIMBP2O15034 1052 aa9.18□□□□□ -0.94
PGBD4P3-201ENST00000440731 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
PGBD4P3-201ENST00000440731 SLC24A1O60721 1099 aa9.15□□□□□ -0.94
PGBD4P3-201ENST00000440731 E2F4Q16254 413 aa9.15□□□□□ -0.94
PGBD4P3-201ENST00000440731 ARSIQ5FYB1 569 aa9.15□□□□□ -0.94
PGBD4P3-201ENST00000440731 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
PGBD4P3-201ENST00000440731 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.95
PGBD4P3-201ENST00000440731 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
PGBD4P3-201ENST00000440731 TBC1D12O60347 775 aa9.12□□□□□ -0.95
PGBD4P3-201ENST00000440731 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
PGBD4P3-201ENST00000440731 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
PGBD4P3-201ENST00000440731 SLC34A2O95436 690 aa9.1□□□□□ -0.95
PGBD4P3-201ENST00000440731 DPYSL4O14531 572 aa9.09□□□□□ -0.95
PGBD4P3-201ENST00000440731 NUDT7P0C024 238 aa9.09□□□□□ -0.95
PGBD4P3-201ENST00000440731 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
PGBD4P3-201ENST00000440731 PTCD2Q8WV60 388 aaKnown RBP9.09□□□□□ -0.95
PGBD4P3-201ENST00000440731 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
PGBD4P3-201ENST00000440731 KCNV2Q8TDN2 545 aa9.08□□□□□ -0.96
PGBD4P3-201ENST00000440731 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
PGBD4P3-201ENST00000440731 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
PGBD4P3-201ENST00000440731 PTGER2P43116 358 aa9.06□□□□□ -0.96
PGBD4P3-201ENST00000440731 ZNF687Q8N1G0 1237 aa9.05□□□□□ -0.96
PGBD4P3-201ENST00000440731 EVI5O60447 810 aa9.04□□□□□ -0.96
PGBD4P3-201ENST00000440731 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
PGBD4P3-201ENST00000440731 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
PGBD4P3-201ENST00000440731 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
PGBD4P3-201ENST00000440731 LHX6Q9UPM6 363 aa9.01□□□□□ -0.97
PGBD4P3-201ENST00000440731 ARHGEF1Q92888 912 aaKnown RBP9□□□□□ -0.97
PGBD4P3-201ENST00000440731 DDX12PQ92771 950 aa8.97□□□□□ -0.97
PGBD4P3-201ENST00000440731 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
PGBD4P3-201ENST00000440731 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
PGBD4P3-201ENST00000440731 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
PGBD4P3-201ENST00000440731 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
PGBD4P3-201ENST00000440731 PDIA6Q15084 440 aa8.95□□□□□ -0.98
PGBD4P3-201ENST00000440731 ZNF454Q8N9F8 522 aa8.95□□□□□ -0.98
PGBD4P3-201ENST00000440731 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
PGBD4P3-201ENST00000440731 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
PGBD4P3-201ENST00000440731 SEMA3EO15041 775 aa8.93□□□□□ -0.98
PGBD4P3-201ENST00000440731 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
PGBD4P3-201ENST00000440731 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
PGBD4P3-201ENST00000440731 NBR1Q14596 966 aa8.9□□□□□ -0.98
PGBD4P3-201ENST00000440731 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
PGBD4P3-201ENST00000440731 PSDA5PKW4 1024 aaPredicted RBP8.89□□□□□ -0.99
PGBD4P3-201ENST00000440731 LSM11P83369 360 aaKnown RBP eCLIP8.89□□□□□ -0.99
PGBD4P3-201ENST00000440731 JPH4Q96JJ6 628 aa8.89□□□□□ -0.99
PGBD4P3-201ENST00000440731 PCDHGA10Q9Y5H3 936 aa8.89□□□□□ -0.99
PGBD4P3-201ENST00000440731 FOSBP53539 338 aa8.88□□□□□ -0.99
PGBD4P3-201ENST00000440731 PHF14O94880 888 aa8.87□□□□□ -0.99
PGBD4P3-201ENST00000440731 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
PGBD4P3-201ENST00000440731 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
PGBD4P3-201ENST00000440731 TYW1BQ6NUM6 668 aa8.85□□□□□ -0.99
PGBD4P3-201ENST00000440731 MAP3K7O43318 606 aa8.84□□□□□ -0.99
PGBD4P3-201ENST00000440731 EPAS1Q99814 870 aa8.84□□□□□ -0.99
PGBD4P3-201ENST00000440731 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms