RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 SCAPERQ9BY12 1400 aa28.23■■■□□ 2.11
FAM20B-202ENST00000440702 PLPPR3Q6T4P5 718 aa28.22■■■□□ 2.11
FAM20B-202ENST00000440702 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
FAM20B-202ENST00000440702 POGZQ7Z3K3 1410 aa28.21■■■□□ 2.11
FAM20B-202ENST00000440702 PCF11O94913 1555 aaKnown RBP28.2■■■□□ 2.1
FAM20B-202ENST00000440702 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
FAM20B-202ENST00000440702 MAGI2Q86UL8 1455 aa28.17■■■□□ 2.1
FAM20B-202ENST00000440702 MLECQ14165 292 aa28.16■■■□□ 2.1
FAM20B-202ENST00000440702 TROQ12816 1431 aaPredicted RBP28.15■■■□□ 2.1
FAM20B-202ENST00000440702 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
FAM20B-202ENST00000440702 EFCAB2Q5VUJ9 269 aa28.14■■■□□ 2.1
FAM20B-202ENST00000440702 FER1L4A9Z1Z3 1794 aa28.14■■■□□ 2.09
FAM20B-202ENST00000440702 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
FAM20B-202ENST00000440702 CLIP1P30622 1438 aa28.12■■■□□ 2.09
FAM20B-202ENST00000440702 ATP10AO60312 1499 aa28.07■■■□□ 2.08
FAM20B-202ENST00000440702 C9orf84Q5VXU9 1444 aa28.06■■■□□ 2.08
FAM20B-202ENST00000440702 CDC42BPBQ9Y5S2 1711 aa28.04■■■□□ 2.08
FAM20B-202ENST00000440702 ZNF518AQ6AHZ1 1483 aa28.04■■■□□ 2.08
FAM20B-202ENST00000440702 HSPA2P54652 639 aa28.04■■■□□ 2.08
FAM20B-202ENST00000440702 MYT1LQ9UL68 1186 aa28.02■■■□□ 2.08
FAM20B-202ENST00000440702 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
FAM20B-202ENST00000440702 KDM5CP41229 1560 aa28■■■□□ 2.07
FAM20B-202ENST00000440702 AFAP1Q8N556 730 aa28■■■□□ 2.07
FAM20B-202ENST00000440702 ARHGEF12Q9NZN5 1544 aa28■■■□□ 2.07
FAM20B-202ENST00000440702 CCDC18Q5T9S5 1454 aa28■■■□□ 2.07
FAM20B-202ENST00000440702 PREX2Q70Z35 1606 aa27.99■■■□□ 2.07
FAM20B-202ENST00000440702 FBXO41Q8TF61 875 aa27.96■■■□□ 2.07
FAM20B-202ENST00000440702 DIP2CQ9Y2E4 1556 aa27.95■■■□□ 2.07
FAM20B-202ENST00000440702 ABCA6Q8N139 1617 aa27.93■■■□□ 2.06
FAM20B-202ENST00000440702 ITSN2Q9NZM3 1697 aa27.93■■■□□ 2.06
FAM20B-202ENST00000440702 ABCC1P33527 1531 aa27.92■■■□□ 2.06
FAM20B-202ENST00000440702 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
FAM20B-202ENST00000440702 FYCO1Q9BQS8 1478 aa27.91■■■□□ 2.06
FAM20B-202ENST00000440702 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
FAM20B-202ENST00000440702 TRAPPC8Q9Y2L5 1435 aa27.9■■■□□ 2.06
FAM20B-202ENST00000440702 PREX1Q8TCU6 1659 aa27.88■■■□□ 2.05
FAM20B-202ENST00000440702 MLH3Q9UHC1 1453 aa27.85■■■□□ 2.05
FAM20B-202ENST00000440702 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
FAM20B-202ENST00000440702 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
FAM20B-202ENST00000440702 KIDINS220Q9ULH0 1771 aa27.81■■■□□ 2.04
FAM20B-202ENST00000440702 SAMD9LQ8IVG5 1584 aa27.79■■■□□ 2.04
FAM20B-202ENST00000440702 SYCP2Q9BX26 1530 aa27.77■■■□□ 2.04
FAM20B-202ENST00000440702 C3P01024 1663 aa27.76■■■□□ 2.03
FAM20B-202ENST00000440702 AGLP35573 1532 aa27.75■■■□□ 2.03
FAM20B-202ENST00000440702 UHRF1BP1Q6BDS2 1440 aa27.74■■■□□ 2.03
FAM20B-202ENST00000440702 SETD1BQ9UPS6 1966 aaKnown RBP27.73■■■□□ 2.03
FAM20B-202ENST00000440702 GPATCH8Q9UKJ3 1502 aaKnown RBP27.73■■■□□ 2.03
FAM20B-202ENST00000440702 ESF1Q9H501 851 aaKnown RBP27.72■■■□□ 2.03
FAM20B-202ENST00000440702 STRCQ7RTU9 1775 aa27.69■■■□□ 2.02
FAM20B-202ENST00000440702 HNRNPMP52272 730 aaKnown RBP eCLIP27.69■■■□□ 2.022e-6■■■■□ 23.5
FAM20B-202ENST00000440702 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
FAM20B-202ENST00000440702 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
FAM20B-202ENST00000440702 MTUS2Q5JR59 1369 aa27.67■■■□□ 2.02
FAM20B-202ENST00000440702 CCNB3Q8WWL7 1395 aa27.67■■■□□ 2.02
FAM20B-202ENST00000440702 SPAG9O60271 1321 aaKnown RBP27.67■■■□□ 2.02
FAM20B-202ENST00000440702 CFDP1Q9UEE9 299 aaPredicted RBP27.65■■■□□ 2.02
FAM20B-202ENST00000440702 ATP7AQ04656 1500 aa27.64■■■□□ 2.02
FAM20B-202ENST00000440702 CNTLNQ9NXG0 1405 aa27.61■■■□□ 2.01
FAM20B-202ENST00000440702 INO80Q9ULG1 1556 aaPredicted RBP27.6■■■□□ 2.01
FAM20B-202ENST00000440702 PLEKHH2Q8IVE3 1493 aa27.6■■■□□ 2.01
FAM20B-202ENST00000440702 TIAM1Q13009 1591 aa27.59■■■□□ 2.01
FAM20B-202ENST00000440702 KIAA1107Q9UPP5 1409 aa27.58■■■□□ 2.01
FAM20B-202ENST00000440702 MROH2AA6NES4 1674 aa27.57■■■□□ 2
FAM20B-202ENST00000440702 EHBP1L1Q8N3D4 1523 aa27.57■■■□□ 2
FAM20B-202ENST00000440702 DMRT2Q9Y5R5 561 aa27.56■■■□□ 2
FAM20B-202ENST00000440702 CEP162Q5TB80 1403 aa27.55■■■□□ 2
FAM20B-202ENST00000440702 CLTCQ00610 1675 aaKnown RBP27.55■■■□□ 2
FAM20B-202ENST00000440702 PLXNC1O60486 1568 aa27.54■■■□□ 2
FAM20B-202ENST00000440702 A2MP01023 1474 aa27.54■■■□□ 2
FAM20B-202ENST00000440702 ZNF644Q9H582 1327 aaPredicted RBP27.53■■■□□ 2
FAM20B-202ENST00000440702 ADGBQ8N7X0 1667 aa27.49■■□□□ 1.99
FAM20B-202ENST00000440702 ZMYM3Q14202 1370 aa27.49■■□□□ 1.99
FAM20B-202ENST00000440702 GGT6Q6P531 493 aa27.47■■□□□ 1.99
FAM20B-202ENST00000440702 PTPRTO14522 1441 aa27.47■■□□□ 1.99
FAM20B-202ENST00000440702 NPATQ14207 1427 aa27.47■■□□□ 1.99
FAM20B-202ENST00000440702 NCOA1Q15788 1441 aa27.46■■□□□ 1.99
FAM20B-202ENST00000440702 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.98
FAM20B-202ENST00000440702 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
FAM20B-202ENST00000440702 MYO3AQ8NEV4 1616 aa27.43■■□□□ 1.98
FAM20B-202ENST00000440702 NCOA2Q15596 1464 aa27.39■■□□□ 1.98
FAM20B-202ENST00000440702 ZNF142P52746 1687 aaPredicted RBP27.39■■□□□ 1.97
FAM20B-202ENST00000440702 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
FAM20B-202ENST00000440702 CAMSAP2Q08AD1 1489 aa27.38■■□□□ 1.97
FAM20B-202ENST00000440702 NCKAP5LQ9HCH0 1330 aa27.36■■□□□ 1.97
FAM20B-202ENST00000440702 LTBP4Q8N2S1 1624 aa27.35■■□□□ 1.97
FAM20B-202ENST00000440702 CEP170BQ9Y4F5 1589 aaPredicted RBP27.35■■□□□ 1.97
FAM20B-202ENST00000440702 RTEL1-TNFRSF6BF6WH68 1400 aa27.34■■□□□ 1.97
FAM20B-202ENST00000440702 CCDC141Q6ZP82 1450 aa27.34■■□□□ 1.97
FAM20B-202ENST00000440702 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
FAM20B-202ENST00000440702 KIF3BO15066 747 aa27.28■■□□□ 1.96
FAM20B-202ENST00000440702 PPP6R1Q9UPN7 881 aa27.28■■□□□ 1.96
FAM20B-202ENST00000440702 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
FAM20B-202ENST00000440702 PLA2R1Q13018 1463 aa27.25■■□□□ 1.95
FAM20B-202ENST00000440702 VPS8Q8N3P4 1428 aa27.24■■□□□ 1.95
FAM20B-202ENST00000440702 ZNF335Q9H4Z2 1342 aaPredicted RBP27.24■■□□□ 1.95
FAM20B-202ENST00000440702 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
FAM20B-202ENST00000440702 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
FAM20B-202ENST00000440702 A2ML1A8K2U0 1454 aa27.22■■□□□ 1.95
FAM20B-202ENST00000440702 TCOF1Q13428 1488 aaKnown RBP27.22■■□□□ 1.95
FAM20B-202ENST00000440702 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms