RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
ITGB1-207ENST00000439974 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
ITGB1-207ENST00000439974 EFCAB2Q5VUJ9 269 aa26.09■■□□□ 1.77
ITGB1-207ENST00000439974 PCF11O94913 1555 aaKnown RBP26.08■■□□□ 1.77
ITGB1-207ENST00000439974 CASKIN1Q8WXD9 1431 aa26.08■■□□□ 1.77
ITGB1-207ENST00000439974 MADDQ8WXG6 1647 aa26.08■■□□□ 1.77
ITGB1-207ENST00000439974 YEATS2Q9ULM3 1422 aa26.07■■□□□ 1.76
ITGB1-207ENST00000439974 CCDC18Q5T9S5 1454 aa26.06■■□□□ 1.76
ITGB1-207ENST00000439974 ARHGAP5Q13017 1502 aa26.03■■□□□ 1.76
ITGB1-207ENST00000439974 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
ITGB1-207ENST00000439974 SIGLEC1Q9BZZ2 1709 aa25.99■■□□□ 1.75
ITGB1-207ENST00000439974 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
ITGB1-207ENST00000439974 ZNF518AQ6AHZ1 1483 aa25.97■■□□□ 1.75
ITGB1-207ENST00000439974 CDC42BPBQ9Y5S2 1711 aa25.95■■□□□ 1.74
ITGB1-207ENST00000439974 ATP10AO60312 1499 aa25.95■■□□□ 1.74
ITGB1-207ENST00000439974 PREX2Q70Z35 1606 aa25.94■■□□□ 1.74
ITGB1-207ENST00000439974 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
ITGB1-207ENST00000439974 C9orf84Q5VXU9 1444 aa25.93■■□□□ 1.74
ITGB1-207ENST00000439974 KDM5CP41229 1560 aa25.93■■□□□ 1.74
ITGB1-207ENST00000439974 MLECQ14165 292 aa25.9■■□□□ 1.74
ITGB1-207ENST00000439974 AFAP1Q8N556 730 aa25.9■■□□□ 1.74
ITGB1-207ENST00000439974 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
ITGB1-207ENST00000439974 ILDR1Q86SU0 546 aaPredicted RBP25.87■■□□□ 1.73
ITGB1-207ENST00000439974 ABCC1P33527 1531 aa25.87■■□□□ 1.73
ITGB1-207ENST00000439974 LMTK3Q96Q04 1460 aa25.86■■□□□ 1.73
ITGB1-207ENST00000439974 CDC42BPAQ5VT25 1732 aa25.85■■□□□ 1.73
ITGB1-207ENST00000439974 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
ITGB1-207ENST00000439974 ARHGEF12Q9NZN5 1544 aa25.84■■□□□ 1.73
ITGB1-207ENST00000439974 MLH3Q9UHC1 1453 aa25.83■■□□□ 1.73
ITGB1-207ENST00000439974 ITSN2Q9NZM3 1697 aa25.83■■□□□ 1.73
ITGB1-207ENST00000439974 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
ITGB1-207ENST00000439974 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
ITGB1-207ENST00000439974 TRAPPC8Q9Y2L5 1435 aa25.81■■□□□ 1.72
ITGB1-207ENST00000439974 REREQ9P2R6 1566 aa25.79■■□□□ 1.72
ITGB1-207ENST00000439974 ABCA6Q8N139 1617 aa25.78■■□□□ 1.72
ITGB1-207ENST00000439974 GPATCH8Q9UKJ3 1502 aaKnown RBP25.77■■□□□ 1.72
ITGB1-207ENST00000439974 ZNF777Q9ULD5 760 aaPredicted RBP25.74■■□□□ 1.71
ITGB1-207ENST00000439974 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
ITGB1-207ENST00000439974 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
ITGB1-207ENST00000439974 CEP162Q5TB80 1403 aa25.72■■□□□ 1.71
ITGB1-207ENST00000439974 KIDINS220Q9ULH0 1771 aa25.72■■□□□ 1.71
ITGB1-207ENST00000439974 AGLP35573 1532 aa25.71■■□□□ 1.71
ITGB1-207ENST00000439974 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.71
ITGB1-207ENST00000439974 SYCP2Q9BX26 1530 aa25.7■■□□□ 1.7
ITGB1-207ENST00000439974 HSPA2P54652 639 aa25.7■■□□□ 1.7
ITGB1-207ENST00000439974 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
ITGB1-207ENST00000439974 PLEKHH2Q8IVE3 1493 aa25.67■■□□□ 1.7
ITGB1-207ENST00000439974 KIAA1107Q9UPP5 1409 aa25.66■■□□□ 1.7
ITGB1-207ENST00000439974 EHBP1L1Q8N3D4 1523 aa25.66■■□□□ 1.7
ITGB1-207ENST00000439974 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
ITGB1-207ENST00000439974 PREX1Q8TCU6 1659 aa25.64■■□□□ 1.7
ITGB1-207ENST00000439974 HNRNPMP52272 730 aaKnown RBP eCLIP25.64■■□□□ 1.7
ITGB1-207ENST00000439974 SPAG9O60271 1321 aaKnown RBP25.63■■□□□ 1.69
ITGB1-207ENST00000439974 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
ITGB1-207ENST00000439974 ESF1Q9H501 851 aaKnown RBP25.6■■□□□ 1.69
ITGB1-207ENST00000439974 SETD1BQ9UPS6 1966 aaKnown RBP25.6■■□□□ 1.69
ITGB1-207ENST00000439974 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
ITGB1-207ENST00000439974 INO80Q9ULG1 1556 aaPredicted RBP25.57■■□□□ 1.68
ITGB1-207ENST00000439974 C3P01024 1663 aa25.57■■□□□ 1.68
ITGB1-207ENST00000439974 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
ITGB1-207ENST00000439974 CNTLNQ9NXG0 1405 aa25.56■■□□□ 1.68
ITGB1-207ENST00000439974 FBXO41Q8TF61 875 aa25.56■■□□□ 1.68
ITGB1-207ENST00000439974 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
ITGB1-207ENST00000439974 PLXNC1O60486 1568 aa25.52■■□□□ 1.68
ITGB1-207ENST00000439974 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
ITGB1-207ENST00000439974 A2MP01023 1474 aa25.51■■□□□ 1.67
ITGB1-207ENST00000439974 MBD5Q9P267 1494 aa25.49■■□□□ 1.67
ITGB1-207ENST00000439974 NCOA2Q15596 1464 aa25.48■■□□□ 1.67
ITGB1-207ENST00000439974 MROH2AA6NES4 1674 aa25.48■■□□□ 1.67
ITGB1-207ENST00000439974 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
ITGB1-207ENST00000439974 ADGBQ8N7X0 1667 aa25.45■■□□□ 1.67
ITGB1-207ENST00000439974 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
ITGB1-207ENST00000439974 STRCQ7RTU9 1775 aa25.43■■□□□ 1.66
ITGB1-207ENST00000439974 NPATQ14207 1427 aa25.42■■□□□ 1.66
ITGB1-207ENST00000439974 ZMYM3Q14202 1370 aa25.42■■□□□ 1.66
ITGB1-207ENST00000439974 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
ITGB1-207ENST00000439974 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
ITGB1-207ENST00000439974 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
ITGB1-207ENST00000439974 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
ITGB1-207ENST00000439974 GGT6Q6P531 493 aa25.39■■□□□ 1.66
ITGB1-207ENST00000439974 LRRC9Q6ZRR7 1453 aa25.38■■□□□ 1.65
ITGB1-207ENST00000439974 RSPH4AQ5TD94 716 aa25.37■■□□□ 1.65
ITGB1-207ENST00000439974 CERKQ8TCT0 537 aa25.36■■□□□ 1.65
ITGB1-207ENST00000439974 PPP6R1Q9UPN7 881 aa25.36■■□□□ 1.65
ITGB1-207ENST00000439974 DHX29Q7Z478 1369 aaKnown RBP25.35■■□□□ 1.65
ITGB1-207ENST00000439974 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
ITGB1-207ENST00000439974 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
ITGB1-207ENST00000439974 PTPRTO14522 1441 aa25.32■■□□□ 1.64
ITGB1-207ENST00000439974 PTPRKQ15262 1439 aa25.3■■□□□ 1.64
ITGB1-207ENST00000439974 NCOA1Q15788 1441 aa25.3■■□□□ 1.64
ITGB1-207ENST00000439974 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
ITGB1-207ENST00000439974 CAMSAP1Q5T5Y3 1602 aa25.26■■□□□ 1.63
ITGB1-207ENST00000439974 KIF3BO15066 747 aa25.26■■□□□ 1.63
ITGB1-207ENST00000439974 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
ITGB1-207ENST00000439974 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
ITGB1-207ENST00000439974 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
ITGB1-207ENST00000439974 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
ITGB1-207ENST00000439974 FAM135AQ9P2D6 1515 aa25.23■■□□□ 1.63
ITGB1-207ENST00000439974 CEP170BQ9Y4F5 1589 aaPredicted RBP25.22■■□□□ 1.63
ITGB1-207ENST00000439974 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms