RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
NANOGP9-201ENST00000439890 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
NANOGP9-201ENST00000439890 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
NANOGP9-201ENST00000439890 MARVELD3Q96A59 401 aa13.55□□□□□ -0.24
NANOGP9-201ENST00000439890 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
NANOGP9-201ENST00000439890 EMP3P54852 163 aa13.52□□□□□ -0.25
NANOGP9-201ENST00000439890 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
NANOGP9-201ENST00000439890 KIF3CO14782 793 aa13.44□□□□□ -0.26
NANOGP9-201ENST00000439890 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
NANOGP9-201ENST00000439890 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
NANOGP9-201ENST00000439890 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
NANOGP9-201ENST00000439890 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
NANOGP9-201ENST00000439890 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
NANOGP9-201ENST00000439890 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
NANOGP9-201ENST00000439890 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
NANOGP9-201ENST00000439890 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
NANOGP9-201ENST00000439890 HS3ST6Q96QI5 342 aa13.36□□□□□ -0.27
NANOGP9-201ENST00000439890 ERBB3P21860 1342 aa13.36□□□□□ -0.27
NANOGP9-201ENST00000439890 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
NANOGP9-201ENST00000439890 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
NANOGP9-201ENST00000439890 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
NANOGP9-201ENST00000439890 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
NANOGP9-201ENST00000439890 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
NANOGP9-201ENST00000439890 FOXK1P85037 733 aa13.3□□□□□ -0.28
NANOGP9-201ENST00000439890 DSG2Q14126 1118 aa13.3□□□□□ -0.28
NANOGP9-201ENST00000439890 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
NANOGP9-201ENST00000439890 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
NANOGP9-201ENST00000439890 PDE4AP27815 886 aa13.27□□□□□ -0.29
NANOGP9-201ENST00000439890 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
NANOGP9-201ENST00000439890 NUDT7P0C024 238 aa13.26□□□□□ -0.29
NANOGP9-201ENST00000439890 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
NANOGP9-201ENST00000439890 CRISPLD2Q9H0B8 497 aa13.26□□□□□ -0.29
NANOGP9-201ENST00000439890 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
NANOGP9-201ENST00000439890 SLC34A2O95436 690 aa13.25□□□□□ -0.29
NANOGP9-201ENST00000439890 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
NANOGP9-201ENST00000439890 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
NANOGP9-201ENST00000439890 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
NANOGP9-201ENST00000439890 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
NANOGP9-201ENST00000439890 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
NANOGP9-201ENST00000439890 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
NANOGP9-201ENST00000439890 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
NANOGP9-201ENST00000439890 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
NANOGP9-201ENST00000439890 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
NANOGP9-201ENST00000439890 TBC1D12O60347 775 aa13.19□□□□□ -0.3
NANOGP9-201ENST00000439890 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
NANOGP9-201ENST00000439890 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
NANOGP9-201ENST00000439890 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
NANOGP9-201ENST00000439890 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
NANOGP9-201ENST00000439890 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
NANOGP9-201ENST00000439890 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
NANOGP9-201ENST00000439890 MFSD10Q14728 455 aa13.1□□□□□ -0.31
NANOGP9-201ENST00000439890 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
NANOGP9-201ENST00000439890 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
NANOGP9-201ENST00000439890 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
NANOGP9-201ENST00000439890 MAP3K9P80192 1104 aa13.03□□□□□ -0.32
NANOGP9-201ENST00000439890 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
NANOGP9-201ENST00000439890 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
NANOGP9-201ENST00000439890 PBX2P40425 430 aa12.99□□□□□ -0.33
NANOGP9-201ENST00000439890 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
NANOGP9-201ENST00000439890 EVI5O60447 810 aa12.98□□□□□ -0.33
NANOGP9-201ENST00000439890 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
NANOGP9-201ENST00000439890 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
NANOGP9-201ENST00000439890 ZNF454Q8N9F8 522 aa12.97□□□□□ -0.33
NANOGP9-201ENST00000439890 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
NANOGP9-201ENST00000439890 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
NANOGP9-201ENST00000439890 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
NANOGP9-201ENST00000439890 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
NANOGP9-201ENST00000439890 DPYSL4O14531 572 aa12.92□□□□□ -0.34
NANOGP9-201ENST00000439890 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
NANOGP9-201ENST00000439890 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
NANOGP9-201ENST00000439890 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
NANOGP9-201ENST00000439890 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
NANOGP9-201ENST00000439890 PSEN2P49810 448 aa12.88□□□□□ -0.35
NANOGP9-201ENST00000439890 JPH4Q96JJ6 628 aa12.88□□□□□ -0.35
NANOGP9-201ENST00000439890 FOSBP53539 338 aa12.87□□□□□ -0.35
NANOGP9-201ENST00000439890 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
NANOGP9-201ENST00000439890 E2F4Q16254 413 aa12.86□□□□□ -0.35
NANOGP9-201ENST00000439890 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
NANOGP9-201ENST00000439890 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
NANOGP9-201ENST00000439890 PTGER2P43116 358 aa12.84□□□□□ -0.35
NANOGP9-201ENST00000439890 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
NANOGP9-201ENST00000439890 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
NANOGP9-201ENST00000439890 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
NANOGP9-201ENST00000439890 PTPREP23469 700 aa12.81□□□□□ -0.36
NANOGP9-201ENST00000439890 NISCHQ9Y2I1 1504 aa12.81□□□□□ -0.36
NANOGP9-201ENST00000439890 ADGRD1Q6QNK2 874 aa12.8□□□□□ -0.36
NANOGP9-201ENST00000439890 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
NANOGP9-201ENST00000439890 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
NANOGP9-201ENST00000439890 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
NANOGP9-201ENST00000439890 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
NANOGP9-201ENST00000439890 DDX12PQ92771 950 aa12.77□□□□□ -0.37
NANOGP9-201ENST00000439890 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
NANOGP9-201ENST00000439890 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
NANOGP9-201ENST00000439890 PHF14O94880 888 aa12.76□□□□□ -0.37
NANOGP9-201ENST00000439890 TK2O00142 265 aa12.74□□□□□ -0.37
NANOGP9-201ENST00000439890 PDIA6Q15084 440 aa12.74□□□□□ -0.37
NANOGP9-201ENST00000439890 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
NANOGP9-201ENST00000439890 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
NANOGP9-201ENST00000439890 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
NANOGP9-201ENST00000439890 EPAS1Q99814 870 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms