RNA–Protein interactions for RNA: ENST00000438981.1

FN1-210, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-210ENST00000438981 ABCC1P33527 1531 aa12.94□□□□□ -0.34
FN1-210ENST00000438981 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
FN1-210ENST00000438981 POGZQ7Z3K3 1410 aa12.94□□□□□ -0.34
FN1-210ENST00000438981 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
FN1-210ENST00000438981 KDM5CP41229 1560 aa12.93□□□□□ -0.34
FN1-210ENST00000438981 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
FN1-210ENST00000438981 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
FN1-210ENST00000438981 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
FN1-210ENST00000438981 SAMD9LQ8IVG5 1584 aa12.92□□□□□ -0.34
FN1-210ENST00000438981 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
FN1-210ENST00000438981 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
FN1-210ENST00000438981 ADAMTSL3P82987 1691 aa12.91□□□□□ -0.34
FN1-210ENST00000438981 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
FN1-210ENST00000438981 RAPGEF3O95398 923 aa12.9□□□□□ -0.34
FN1-210ENST00000438981 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
FN1-210ENST00000438981 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
FN1-210ENST00000438981 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
FN1-210ENST00000438981 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
FN1-210ENST00000438981 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
FN1-210ENST00000438981 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
FN1-210ENST00000438981 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
FN1-210ENST00000438981 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
FN1-210ENST00000438981 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
FN1-210ENST00000438981 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
FN1-210ENST00000438981 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
FN1-210ENST00000438981 ARHGEF12Q9NZN5 1544 aa12.86□□□□□ -0.35
FN1-210ENST00000438981 GPATCH8Q9UKJ3 1502 aaKnown RBP12.86□□□□□ -0.35
FN1-210ENST00000438981 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
FN1-210ENST00000438981 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
FN1-210ENST00000438981 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
FN1-210ENST00000438981 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
FN1-210ENST00000438981 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
FN1-210ENST00000438981 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
FN1-210ENST00000438981 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
FN1-210ENST00000438981 MAP3K1Q13233 1512 aa12.82□□□□□ -0.36
FN1-210ENST00000438981 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
FN1-210ENST00000438981 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
FN1-210ENST00000438981 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
FN1-210ENST00000438981 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
FN1-210ENST00000438981 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
FN1-210ENST00000438981 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
FN1-210ENST00000438981 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
FN1-210ENST00000438981 ATP10AO60312 1499 aa12.78□□□□□ -0.36
FN1-210ENST00000438981 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
FN1-210ENST00000438981 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
FN1-210ENST00000438981 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
FN1-210ENST00000438981 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
FN1-210ENST00000438981 PTPRMP28827 1452 aa12.76□□□□□ -0.37
FN1-210ENST00000438981 KIAA1107Q9UPP5 1409 aa12.75□□□□□ -0.37
FN1-210ENST00000438981 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
FN1-210ENST00000438981 AGLP35573 1532 aa12.73□□□□□ -0.37
FN1-210ENST00000438981 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
FN1-210ENST00000438981 ARHGEF5Q12774 1597 aa12.73□□□□□ -0.37
FN1-210ENST00000438981 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
FN1-210ENST00000438981 ARID4BQ4LE39 1312 aaPredicted RBP12.72□□□□□ -0.37
FN1-210ENST00000438981 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
FN1-210ENST00000438981 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
FN1-210ENST00000438981 C3P01024 1663 aa12.7□□□□□ -0.38
FN1-210ENST00000438981 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
FN1-210ENST00000438981 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
FN1-210ENST00000438981 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
FN1-210ENST00000438981 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
FN1-210ENST00000438981 MYOM3Q5VTT5 1437 aa12.68□□□□□ -0.38
FN1-210ENST00000438981 MAST1Q9Y2H9 1570 aa12.68□□□□□ -0.38
FN1-210ENST00000438981 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
FN1-210ENST00000438981 ZNF644Q9H582 1327 aaPredicted RBP12.67□□□□□ -0.38
FN1-210ENST00000438981 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
FN1-210ENST00000438981 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
FN1-210ENST00000438981 SPAG9O60271 1321 aaKnown RBP12.65□□□□□ -0.38
FN1-210ENST00000438981 A2MP01023 1474 aa12.65□□□□□ -0.38
FN1-210ENST00000438981 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
FN1-210ENST00000438981 DNMT1P26358 1616 aaKnown RBP12.64□□□□□ -0.39
FN1-210ENST00000438981 MYT1LQ9UL68 1186 aa12.64□□□□□ -0.39
FN1-210ENST00000438981 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
FN1-210ENST00000438981 MIA2Q96PC5 1412 aa12.63□□□□□ -0.39
FN1-210ENST00000438981 MLECQ14165 292 aa12.63□□□□□ -0.39
FN1-210ENST00000438981 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
FN1-210ENST00000438981 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
FN1-210ENST00000438981 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
FN1-210ENST00000438981 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
FN1-210ENST00000438981 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
FN1-210ENST00000438981 ZNF142P52746 1687 aaPredicted RBP12.59□□□□□ -0.39
FN1-210ENST00000438981 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
FN1-210ENST00000438981 ZC3H13Q5T200 1668 aaKnown RBP12.58□□□□□ -0.4
FN1-210ENST00000438981 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
FN1-210ENST00000438981 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
FN1-210ENST00000438981 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
FN1-210ENST00000438981 MROH1Q8NDA8 1641 aa12.57□□□□□ -0.4
FN1-210ENST00000438981 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
FN1-210ENST00000438981 CEP152O94986 1710 aa12.57□□□□□ -0.4
FN1-210ENST00000438981 APLP2Q06481 763 aa12.56□□□□□ -0.4
FN1-210ENST00000438981 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
FN1-210ENST00000438981 DAPK1P53355 1430 aa12.54□□□□□ -0.4
FN1-210ENST00000438981 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
FN1-210ENST00000438981 DHX29Q7Z478 1369 aaKnown RBP12.54□□□□□ -0.4
FN1-210ENST00000438981 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
FN1-210ENST00000438981 PLPPR3Q6T4P5 718 aa12.53□□□□□ -0.4
FN1-210ENST00000438981 ABCC5O15440 1437 aa12.53□□□□□ -0.4
FN1-210ENST00000438981 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.4
FN1-210ENST00000438981 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms