RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ARID4BQ4LE39 1312 aaPredicted RBP29.99■■■□□ 2.39
GTF3A-204ENST00000438571 CDC42BPBQ9Y5S2 1711 aa29.97■■■□□ 2.39
GTF3A-204ENST00000438571 POGZQ7Z3K3 1410 aa29.96■■■□□ 2.39
GTF3A-204ENST00000438571 SCAPERQ9BY12 1400 aa29.96■■■□□ 2.39
GTF3A-204ENST00000438571 TROQ12816 1431 aaPredicted RBP29.95■■■□□ 2.38
GTF3A-204ENST00000438571 FER1L4A9Z1Z3 1794 aa29.94■■■□□ 2.38
GTF3A-204ENST00000438571 ILDR1Q86SU0 546 aaPredicted RBP29.93■■■□□ 2.38
GTF3A-204ENST00000438571 MAGI2Q86UL8 1455 aa29.9■■■□□ 2.38
GTF3A-204ENST00000438571 ARHGAP5Q13017 1502 aa29.89■■■□□ 2.38
GTF3A-204ENST00000438571 PREX2Q70Z35 1606 aa29.88■■■□□ 2.37
GTF3A-204ENST00000438571 CDC42BPAQ5VT25 1732 aa29.85■■■□□ 2.37
GTF3A-204ENST00000438571 CLIP1P30622 1438 aa29.85■■■□□ 2.37
GTF3A-204ENST00000438571 CDK11AQ9UQ88 783 aaPredicted RBP29.84■■■□□ 2.37
GTF3A-204ENST00000438571 CASKIN1Q8WXD9 1431 aa29.84■■■□□ 2.37
GTF3A-204ENST00000438571 LMTK3Q96Q04 1460 aa29.84■■■□□ 2.37
GTF3A-204ENST00000438571 KDM5CP41229 1560 aa29.83■■■□□ 2.37
GTF3A-204ENST00000438571 CCDC18Q5T9S5 1454 aa29.81■■■□□ 2.36
GTF3A-204ENST00000438571 EFCAB2Q5VUJ9 269 aa29.81■■■□□ 2.36
GTF3A-204ENST00000438571 ITSN2Q9NZM3 1697 aa29.81■■■□□ 2.36
GTF3A-204ENST00000438571 ZNF518AQ6AHZ1 1483 aa29.77■■■□□ 2.36
GTF3A-204ENST00000438571 C9orf84Q5VXU9 1444 aa29.77■■■□□ 2.36
GTF3A-204ENST00000438571 DIP2CQ9Y2E4 1556 aa29.77■■■□□ 2.36
GTF3A-204ENST00000438571 ATP10AO60312 1499 aa29.76■■■□□ 2.35
GTF3A-204ENST00000438571 ABCA6Q8N139 1617 aa29.76■■■□□ 2.35
GTF3A-204ENST00000438571 MLECQ14165 292 aa29.76■■■□□ 2.35
GTF3A-204ENST00000438571 PLPPR3Q6T4P5 718 aa29.76■■■□□ 2.35
GTF3A-204ENST00000438571 ABCC1P33527 1531 aa29.76■■■□□ 2.35
GTF3A-204ENST00000438571 FYCO1Q9BQS8 1478 aa29.75■■■□□ 2.35
GTF3A-204ENST00000438571 ARHGEF12Q9NZN5 1544 aa29.75■■■□□ 2.35
GTF3A-204ENST00000438571 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
GTF3A-204ENST00000438571 KIDINS220Q9ULH0 1771 aa29.67■■■□□ 2.34
GTF3A-204ENST00000438571 TRAPPC8Q9Y2L5 1435 aa29.66■■■□□ 2.34
GTF3A-204ENST00000438571 SAMD9LQ8IVG5 1584 aa29.64■■■□□ 2.34
GTF3A-204ENST00000438571 REREQ9P2R6 1566 aa29.64■■■□□ 2.34
GTF3A-204ENST00000438571 PREX1Q8TCU6 1659 aa29.63■■■□□ 2.33
GTF3A-204ENST00000438571 HSPA2P54652 639 aa29.62■■■□□ 2.33
GTF3A-204ENST00000438571 MLH3Q9UHC1 1453 aa29.61■■■□□ 2.33
GTF3A-204ENST00000438571 C3P01024 1663 aa29.57■■■□□ 2.32
GTF3A-204ENST00000438571 SYCP2Q9BX26 1530 aa29.57■■■□□ 2.32
GTF3A-204ENST00000438571 MYT1LQ9UL68 1186 aa29.57■■■□□ 2.32
GTF3A-204ENST00000438571 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
GTF3A-204ENST00000438571 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
GTF3A-204ENST00000438571 AGLP35573 1532 aa29.5■■■□□ 2.31
GTF3A-204ENST00000438571 SUPT6HQ7KZ85 1726 aaKnown RBP29.49■■■□□ 2.31
GTF3A-204ENST00000438571 SETD1BQ9UPS6 1966 aaKnown RBP29.48■■■□□ 2.31
GTF3A-204ENST00000438571 ZNF777Q9ULD5 760 aaPredicted RBP29.47■■■□□ 2.31
GTF3A-204ENST00000438571 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
GTF3A-204ENST00000438571 TIAM1Q13009 1591 aa29.46■■■□□ 2.31
GTF3A-204ENST00000438571 INO80Q9ULG1 1556 aaPredicted RBP29.45■■■□□ 2.31
GTF3A-204ENST00000438571 ATP7AQ04656 1500 aa29.41■■■□□ 2.3
GTF3A-204ENST00000438571 EHBP1L1Q8N3D4 1523 aa29.41■■■□□ 2.3
GTF3A-204ENST00000438571 CEP162Q5TB80 1403 aa29.41■■■□□ 2.3
GTF3A-204ENST00000438571 FBXO41Q8TF61 875 aa29.41■■■□□ 2.3
GTF3A-204ENST00000438571 MTUS2Q5JR59 1369 aa29.39■■■□□ 2.3
GTF3A-204ENST00000438571 HNRNPMP52272 730 aaKnown RBP eCLIP29.39■■■□□ 2.3
GTF3A-204ENST00000438571 CCNB3Q8WWL7 1395 aa29.38■■■□□ 2.29
GTF3A-204ENST00000438571 MROH2AA6NES4 1674 aa29.37■■■□□ 2.29
GTF3A-204ENST00000438571 PLXNC1O60486 1568 aa29.36■■■□□ 2.29
GTF3A-204ENST00000438571 CLTCQ00610 1675 aaKnown RBP29.34■■■□□ 2.29
GTF3A-204ENST00000438571 UHRF1BP1Q6BDS2 1440 aa29.34■■■□□ 2.29
GTF3A-204ENST00000438571 CFDP1Q9UEE9 299 aaPredicted RBP29.33■■■□□ 2.29
GTF3A-204ENST00000438571 SPAG9O60271 1321 aaKnown RBP29.33■■■□□ 2.29
GTF3A-204ENST00000438571 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
GTF3A-204ENST00000438571 PLEKHH2Q8IVE3 1493 aa29.33■■■□□ 2.29
GTF3A-204ENST00000438571 ADGBQ8N7X0 1667 aa29.32■■■□□ 2.28
GTF3A-204ENST00000438571 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
GTF3A-204ENST00000438571 A2MP01023 1474 aa29.26■■■□□ 2.27
GTF3A-204ENST00000438571 CNTLNQ9NXG0 1405 aa29.25■■■□□ 2.27
GTF3A-204ENST00000438571 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
GTF3A-204ENST00000438571 ESF1Q9H501 851 aaKnown RBP29.23■■■□□ 2.27
GTF3A-204ENST00000438571 NCOA2Q15596 1464 aa29.2■■■□□ 2.26
GTF3A-204ENST00000438571 MYO3AQ8NEV4 1616 aa29.19■■■□□ 2.26
GTF3A-204ENST00000438571 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
GTF3A-204ENST00000438571 ZNF142P52746 1687 aaPredicted RBP29.16■■■□□ 2.26
GTF3A-204ENST00000438571 CERKQ8TCT0 537 aa29.16■■■□□ 2.26
GTF3A-204ENST00000438571 ZMYM3Q14202 1370 aa29.14■■■□□ 2.26
GTF3A-204ENST00000438571 CAMSAP1Q5T5Y3 1602 aa29.12■■■□□ 2.25
GTF3A-204ENST00000438571 NPATQ14207 1427 aa29.12■■■□□ 2.25
GTF3A-204ENST00000438571 LOC105371045A0A1W2PR82 267 aa29.11■■■□□ 2.25
GTF3A-204ENST00000438571 NCOA1Q15788 1441 aa29.11■■■□□ 2.25
GTF3A-204ENST00000438571 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
GTF3A-204ENST00000438571 GGT6Q6P531 493 aa29.09■■■□□ 2.25
GTF3A-204ENST00000438571 VPS8Q8N3P4 1428 aa29.09■■■□□ 2.25
GTF3A-204ENST00000438571 RTEL1-TNFRSF6BF6WH68 1400 aa29.08■■■□□ 2.25
GTF3A-204ENST00000438571 PTPRTO14522 1441 aa29.07■■■□□ 2.24
GTF3A-204ENST00000438571 CEP170BQ9Y4F5 1589 aaPredicted RBP29.06■■■□□ 2.24
GTF3A-204ENST00000438571 PTPRKQ15262 1439 aa29.06■■■□□ 2.24
GTF3A-204ENST00000438571 ARHGEF5Q12774 1597 aa29.05■■■□□ 2.24
GTF3A-204ENST00000438571 LRRC9Q6ZRR7 1453 aa29.04■■■□□ 2.24
GTF3A-204ENST00000438571 LTBP4Q8N2S1 1624 aa29.03■■■□□ 2.24
GTF3A-204ENST00000438571 DMRT2Q9Y5R5 561 aa29.03■■■□□ 2.24
GTF3A-204ENST00000438571 DHX29Q7Z478 1369 aaKnown RBP29.01■■■□□ 2.23
GTF3A-204ENST00000438571 KDM5DQ9BY66 1539 aa28.95■■■□□ 2.23
GTF3A-204ENST00000438571 DNMT1P26358 1616 aaKnown RBP28.94■■■□□ 2.22
GTF3A-204ENST00000438571 MAST1Q9Y2H9 1570 aa28.93■■■□□ 2.22
GTF3A-204ENST00000438571 KANK4Q5T7N3 995 aaPredicted RBP28.93■■■□□ 2.22
GTF3A-204ENST00000438571 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
GTF3A-204ENST00000438571 POLR1AO95602 1720 aaPredicted RBP28.92■■■□□ 2.22
GTF3A-204ENST00000438571 MAP3K1Q13233 1512 aa28.92■■■□□ 2.22
GTF3A-204ENST00000438571 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms