RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
TRAPPC13-204ENST00000438419 FBXO22Q8NEZ5 403 aa9.66□□□□□ -0.86
TRAPPC13-204ENST00000438419 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
TRAPPC13-204ENST00000438419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC13-204ENST00000438419 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.87
TRAPPC13-204ENST00000438419 GTPBP6O43824 516 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC13-204ENST00000438419 NLRP6P59044 892 aa9.63□□□□□ -0.87
TRAPPC13-204ENST00000438419 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
TRAPPC13-204ENST00000438419 MYT1LQ9UL68 1186 aa9.62□□□□□ -0.87
TRAPPC13-204ENST00000438419 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC13-204ENST00000438419 PPP1R37O75864 691 aa9.57□□□□□ -0.88
TRAPPC13-204ENST00000438419 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC13-204ENST00000438419 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
TRAPPC13-204ENST00000438419 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC13-204ENST00000438419 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
TRAPPC13-204ENST00000438419 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
TRAPPC13-204ENST00000438419 ERBB3P21860 1342 aa9.51□□□□□ -0.89
TRAPPC13-204ENST00000438419 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
TRAPPC13-204ENST00000438419 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
TRAPPC13-204ENST00000438419 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
TRAPPC13-204ENST00000438419 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
TRAPPC13-204ENST00000438419 HOXB1P14653 301 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-204ENST00000438419 PTGER2P43116 358 aa9.44□□□□□ -0.9
TRAPPC13-204ENST00000438419 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
TRAPPC13-204ENST00000438419 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
TRAPPC13-204ENST00000438419 G3V3G9 751 aa9.4□□□□□ -0.9
TRAPPC13-204ENST00000438419 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC13-204ENST00000438419 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
TRAPPC13-204ENST00000438419 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
TRAPPC13-204ENST00000438419 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
TRAPPC13-204ENST00000438419 DOK7Q18PE1 504 aa9.37□□□□□ -0.91
TRAPPC13-204ENST00000438419 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
TRAPPC13-204ENST00000438419 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
TRAPPC13-204ENST00000438419 KIF3CO14782 793 aa9.33□□□□□ -0.92
TRAPPC13-204ENST00000438419 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
TRAPPC13-204ENST00000438419 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC13-204ENST00000438419 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
TRAPPC13-204ENST00000438419 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
TRAPPC13-204ENST00000438419 C2orf72A6NCS6 295 aa9.31□□□□□ -0.92
TRAPPC13-204ENST00000438419 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
TRAPPC13-204ENST00000438419 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC13-204ENST00000438419 PDE4AP27815 886 aa9.28□□□□□ -0.92
TRAPPC13-204ENST00000438419 TMC2Q8TDI7 906 aa9.28□□□□□ -0.92
TRAPPC13-204ENST00000438419 LARP6Q9BRS8 491 aaKnown RBP9.27□□□□□ -0.93
TRAPPC13-204ENST00000438419 DSG2Q14126 1118 aa9.26□□□□□ -0.93
TRAPPC13-204ENST00000438419 MFSD10Q14728 455 aa9.26□□□□□ -0.93
TRAPPC13-204ENST00000438419 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
TRAPPC13-204ENST00000438419 FOXK1P85037 733 aa9.24□□□□□ -0.93
TRAPPC13-204ENST00000438419 PPP1R15BQ5SWA1 713 aa9.22□□□□□ -0.93
TRAPPC13-204ENST00000438419 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
TRAPPC13-204ENST00000438419 DDX27Q96GQ7 796 aaKnown RBP9.22□□□□□ -0.93
TRAPPC13-204ENST00000438419 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
TRAPPC13-204ENST00000438419 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
TRAPPC13-204ENST00000438419 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
TRAPPC13-204ENST00000438419 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAPPC13-204ENST00000438419 CAMK2BQ13554 666 aa9.15□□□□□ -0.94
TRAPPC13-204ENST00000438419 WDR70Q9NW82 654 aa9.15□□□□□ -0.94
TRAPPC13-204ENST00000438419 SLC34A2O95436 690 aa9.14□□□□□ -0.95
TRAPPC13-204ENST00000438419 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
TRAPPC13-204ENST00000438419 E2F4Q16254 413 aa9.12□□□□□ -0.95
TRAPPC13-204ENST00000438419 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC13-204ENST00000438419 GPR153Q6NV75 609 aa9.11□□□□□ -0.95
TRAPPC13-204ENST00000438419 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
TRAPPC13-204ENST00000438419 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
TRAPPC13-204ENST00000438419 KCNV2Q8TDN2 545 aa9.08□□□□□ -0.96
TRAPPC13-204ENST00000438419 UPF1Q92900 1129 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRAPPC13-204ENST00000438419 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
TRAPPC13-204ENST00000438419 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
TRAPPC13-204ENST00000438419 KHSRPQ92945 711 aaKnown RBP eCLIP9.06□□□□□ -0.965e-6■■■□□ 15.3
TRAPPC13-204ENST00000438419 KDM4FA0A1W2PPD8 638 aa9.05□□□□□ -0.96
TRAPPC13-204ENST00000438419 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC13-204ENST00000438419 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC13-204ENST00000438419 DPYSL4O14531 572 aa9.05□□□□□ -0.96
TRAPPC13-204ENST00000438419 RGS20O76081 388 aa9.02□□□□□ -0.97
TRAPPC13-204ENST00000438419 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
TRAPPC13-204ENST00000438419 ARHGEF1Q92888 912 aaKnown RBP9.02□□□□□ -0.97
TRAPPC13-204ENST00000438419 TBC1D12O60347 775 aa9.01□□□□□ -0.97
TRAPPC13-204ENST00000438419 NUDT7P0C024 238 aa9.01□□□□□ -0.97
TRAPPC13-204ENST00000438419 PBX2P40425 430 aa9.01□□□□□ -0.97
TRAPPC13-204ENST00000438419 P3H3Q8IVL6 736 aa9□□□□□ -0.97
TRAPPC13-204ENST00000438419 ANO8Q9HCE9 1232 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC13-204ENST00000438419 EVI5O60447 810 aa8.98□□□□□ -0.97
TRAPPC13-204ENST00000438419 PDIA6Q15084 440 aa8.97□□□□□ -0.97
TRAPPC13-204ENST00000438419 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC13-204ENST00000438419 LHX6Q9UPM6 363 aa8.95□□□□□ -0.98
TRAPPC13-204ENST00000438419 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
TRAPPC13-204ENST00000438419 SEMA3EO15041 775 aa8.91□□□□□ -0.98
TRAPPC13-204ENST00000438419 ADGRD1Q6QNK2 874 aa8.9□□□□□ -0.98
TRAPPC13-204ENST00000438419 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC13-204ENST00000438419 FOSBP53539 338 aa8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 Q6ZNB5 142 aa8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 DDX12PQ92771 950 aa8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
TRAPPC13-204ENST00000438419 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC13-204ENST00000438419 JPH4Q96JJ6 628 aa8.87□□□□□ -0.99
TRAPPC13-204ENST00000438419 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
TRAPPC13-204ENST00000438419 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
TRAPPC13-204ENST00000438419 PHF14O94880 888 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms