RNA–Protein interactions for RNA: ENST00000438258.1

EML3-205, Transcript of echinoderm microtubule associated protein like 3, human

TSL 4

Gene EML3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EML3-205	ENST00000438258	FRMPD1	Q5SYB0	1578 aa		32.54	■■■□□ 2.8
EML3-205	ENST00000438258	EHBP1L1	Q8N3D4	1523 aa		32.53	■■■□□ 2.8
EML3-205	ENST00000438258	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.53	■■■□□ 2.8
EML3-205	ENST00000438258	RAPGEF3	O95398	923 aa		32.5	■■■□□ 2.79
EML3-205	ENST00000438258	ZMYM4	Q5VZL5	1548 aa		32.46	■■■□□ 2.79
EML3-205	ENST00000438258	TIAM1	Q13009	1591 aa		32.46	■■■□□ 2.79
EML3-205	ENST00000438258	SCAPER	Q9BY12	1400 aa		32.45	■■■□□ 2.79
EML3-205	ENST00000438258	ITSN2	Q9NZM3	1697 aa		32.43	■■■□□ 2.78
EML3-205	ENST00000438258	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.43	■■■□□ 2.78
EML3-205	ENST00000438258	POGZ	Q7Z3K3	1410 aa		32.43	■■■□□ 2.78
EML3-205	ENST00000438258	ARHGEF40	Q8TER5	1519 aa		32.41	■■■□□ 2.78
EML3-205	ENST00000438258	MAGI2	Q86UL8	1455 aa		32.41	■■■□□ 2.78
EML3-205	ENST00000438258	CCNB3	Q8WWL7	1395 aa		32.39	■■■□□ 2.78
EML3-205	ENST00000438258	MAP3K1	Q13233	1512 aa		32.39	■■■□□ 2.78
EML3-205	ENST00000438258	ZNF518A	Q6AHZ1	1483 aa		32.38	■■■□□ 2.77
EML3-205	ENST00000438258	ABCC1	P33527	1531 aa		32.36	■■■□□ 2.77
EML3-205	ENST00000438258	ZFYVE16	Q7Z3T8	1539 aa		32.36	■■■□□ 2.77
EML3-205	ENST00000438258	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.36	■■■□□ 2.77
EML3-205	ENST00000438258	PLEKHH2	Q8IVE3	1493 aa		32.3	■■■□□ 2.76
EML3-205	ENST00000438258	KDM5C	P41229	1560 aa		32.3	■■■□□ 2.76
EML3-205	ENST00000438258	APLP2	Q06481	763 aa		32.3	■■■□□ 2.76
EML3-205	ENST00000438258	KDM4F	A0A1W2PPD8	638 aa		32.29	■■■□□ 2.76
EML3-205	ENST00000438258	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.28	■■■□□ 2.76
EML3-205	ENST00000438258	LRRC9	Q6ZRR7	1453 aa		32.28	■■■□□ 2.76
EML3-205	ENST00000438258	SAMD9L	Q8IVG5	1584 aa		32.28	■■■□□ 2.76
EML3-205	ENST00000438258	HECW2	Q9P2P5	1572 aa		32.28	■■■□□ 2.76
EML3-205	ENST00000438258	NCOA2	Q15596	1464 aa		32.25	■■■□□ 2.75
EML3-205	ENST00000438258	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.24	■■■□□ 2.75
EML3-205	ENST00000438258	SYCP2	Q9BX26	1530 aa		32.21	■■■□□ 2.75
EML3-205	ENST00000438258	KIAA1107	Q9UPP5	1409 aa		32.2	■■■□□ 2.75
EML3-205	ENST00000438258	BCORL1	Q5H9F3	1711 aa		32.2	■■■□□ 2.74
EML3-205	ENST00000438258	YEATS2	Q9ULM3	1422 aa		32.19	■■■□□ 2.74
EML3-205	ENST00000438258	MYT1L	Q9UL68	1186 aa		32.19	■■■□□ 2.74
EML3-205	ENST00000438258	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.19	■■■□□ 2.74
EML3-205	ENST00000438258	ARHGEF12	Q9NZN5	1544 aa		32.18	■■■□□ 2.74
EML3-205	ENST00000438258	AFAP1	Q8N556	730 aa		32.18	■■■□□ 2.74
EML3-205	ENST00000438258	MLH3	Q9UHC1	1453 aa		32.17	■■■□□ 2.74
EML3-205	ENST00000438258	ATP10A	O60312	1499 aa		32.16	■■■□□ 2.74
EML3-205	ENST00000438258	TRAPPC8	Q9Y2L5	1435 aa		32.16	■■■□□ 2.74
EML3-205	ENST00000438258	C9orf84	Q5VXU9	1444 aa		32.15	■■■□□ 2.74
EML3-205	ENST00000438258	ADAMTSL3	P82987	1691 aa		32.14	■■■□□ 2.74
EML3-205	ENST00000438258	KIDINS220	Q9ULH0	1771 aa		32.11	■■■□□ 2.73
EML3-205	ENST00000438258	DIP2C	Q9Y2E4	1556 aa		32.1	■■■□□ 2.73
EML3-205	ENST00000438258	ABCA6	Q8N139	1617 aa		32.09	■■■□□ 2.73
EML3-205	ENST00000438258	RERE	Q9P2R6	1566 aa		32.09	■■■□□ 2.73
EML3-205	ENST00000438258	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
EML3-205	ENST00000438258	KANK4	Q5T7N3	995 aa	Predicted RBP	32.06	■■■□□ 2.72
EML3-205	ENST00000438258	SIGLEC1	Q9BZZ2	1709 aa		32.05	■■■□□ 2.72
EML3-205	ENST00000438258	CAMSAP2	Q08AD1	1489 aa		32.04	■■■□□ 2.72
EML3-205	ENST00000438258	SPAG9	O60271	1321 aa	Known RBP	32.04	■■■□□ 2.72
EML3-205	ENST00000438258	ATP7A	Q04656	1500 aa		32.03	■■■□□ 2.72
EML3-205	ENST00000438258	INO80	Q9ULG1	1556 aa	Predicted RBP	32.02	■■■□□ 2.72
EML3-205	ENST00000438258	MADD	Q8WXG6	1647 aa		32.02	■■■□□ 2.72
EML3-205	ENST00000438258	FER1L4	A9Z1Z3	1794 aa		32.01	■■■□□ 2.71
EML3-205	ENST00000438258	MYOM3	Q5VTT5	1437 aa		32	■■■□□ 2.71
EML3-205	ENST00000438258	RSPH4A	Q5TD94	716 aa		32	■■■□□ 2.71
EML3-205	ENST00000438258	MIA2	Q96PC5	1412 aa		31.99	■■■□□ 2.71
EML3-205	ENST00000438258	RIMS1	Q86UR5	1692 aa	Known RBP	31.98	■■■□□ 2.71
EML3-205	ENST00000438258	ZNF644	Q9H582	1327 aa	Predicted RBP	31.98	■■■□□ 2.71
EML3-205	ENST00000438258	MBD5	Q9P267	1494 aa		31.97	■■■□□ 2.71
EML3-205	ENST00000438258	ADGB	Q8N7X0	1667 aa		31.97	■■■□□ 2.71
EML3-205	ENST00000438258	ARHGEF5	Q12774	1597 aa		31.97	■■■□□ 2.71
EML3-205	ENST00000438258	CCDC141	Q6ZP82	1450 aa		31.97	■■■□□ 2.71
EML3-205	ENST00000438258	AGL	P35573	1532 aa		31.95	■■■□□ 2.7
EML3-205	ENST00000438258	PTPRM	P28827	1452 aa		31.92	■■■□□ 2.7
EML3-205	ENST00000438258	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.92	■■■□□ 2.7
EML3-205	ENST00000438258	MLEC	Q14165	292 aa		31.88	■■■□□ 2.69
EML3-205	ENST00000438258	PTPN23	Q9H3S7	1636 aa		31.86	■■■□□ 2.69
EML3-205	ENST00000438258	A2M	P01023	1474 aa		31.84	■■■□□ 2.69
EML3-205	ENST00000438258	PLXNC1	O60486	1568 aa		31.83	■■■□□ 2.69
EML3-205	ENST00000438258	TSPY4	P0CV99	314 aa		31.83	■■■□□ 2.69
EML3-205	ENST00000438258	TSPY10	P0CW01	314 aa		31.83	■■■□□ 2.69
EML3-205	ENST00000438258	FGD6	Q6ZV73	1430 aa		31.79	■■■□□ 2.68
EML3-205	ENST00000438258	MAST1	Q9Y2H9	1570 aa		31.79	■■■□□ 2.68
EML3-205	ENST00000438258	ESF1	Q9H501	851 aa	Known RBP	31.78	■■■□□ 2.68
EML3-205	ENST00000438258	CROCC2	H7BZ55	1655 aa		31.76	■■■□□ 2.68
EML3-205	ENST00000438258	TCOF1	Q13428	1488 aa	Known RBP	31.72	■■■□□ 2.67
EML3-205	ENST00000438258	CNTLN	Q9NXG0	1405 aa		31.72	■■■□□ 2.67
EML3-205	ENST00000438258	DNMT1	P26358	1616 aa	Known RBP	31.7	■■■□□ 2.66
EML3-205	ENST00000438258	MROH2A	A6NES4	1674 aa		31.7	■■■□□ 2.66
EML3-205	ENST00000438258	DHX29	Q7Z478	1369 aa	Known RBP	31.69	■■■□□ 2.66
EML3-205	ENST00000438258	SETD1B	Q9UPS6	1966 aa	Known RBP	31.69	■■■□□ 2.66
EML3-205	ENST00000438258	SHANK2	Q9UPX8	1470 aa		31.69	■■■□□ 2.66
EML3-205	ENST00000438258	C3	P01024	1663 aa		31.65	■■■□□ 2.66
EML3-205	ENST00000438258	PPP6R1	Q9UPN7	881 aa		31.63	■■■□□ 2.65
EML3-205	ENST00000438258	DAPK1	P53355	1430 aa		31.61	■■■□□ 2.65
EML3-205	ENST00000438258	PLPPR3	Q6T4P5	718 aa		31.61	■■■□□ 2.65
EML3-205	ENST00000438258	CLTC	Q00610	1675 aa	Known RBP	31.6	■■■□□ 2.65
EML3-205	ENST00000438258	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.6	■■■□□ 2.65
EML3-205	ENST00000438258	PREX1	Q8TCU6	1659 aa		31.6	■■■□□ 2.65
EML3-205	ENST00000438258	FAM135A	Q9P2D6	1515 aa		31.59	■■■□□ 2.65
EML3-205	ENST00000438258	ABCC5	O15440	1437 aa		31.58	■■■□□ 2.65
EML3-205	ENST00000438258	GGT6	Q6P531	493 aa		31.57	■■■□□ 2.64
EML3-205	ENST00000438258	DUOX2	Q9NRD8	1548 aa		31.56	■■■□□ 2.64
EML3-205	ENST00000438258	KIF3B	O15066	747 aa		31.55	■■■□□ 2.64
EML3-205	ENST00000438258	FAM50A	Q14320	339 aa	Known RBP	31.54	■■■□□ 2.64
EML3-205	ENST00000438258	RNF17	Q9BXT8	1623 aa	Known RBP	31.52	■■■□□ 2.64
EML3-205	ENST00000438258	LMTK3	Q96Q04	1460 aa		31.5	■■■□□ 2.63
EML3-205	ENST00000438258	ANKRD30A	Q9BXX3	1397 aa		31.49	■■■□□ 2.63
EML3-205	ENST00000438258	KIF15	Q9NS87	1388 aa		31.49	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms