RNA–Protein interactions for RNA: ENST00000437404.2

STAU1-208, Transcript of staufen double-stranded RNA binding protein 1, human

TSL 1 (best)

Gene STAU1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAU1-208	ENST00000437404	POGZ	Q7Z3K3	1410 aa		33.2	■■■□□ 2.91
STAU1-208	ENST00000437404	ADAMTSL3	P82987	1691 aa		33.2	■■■□□ 2.91
STAU1-208	ENST00000437404	ARHGAP5	Q13017	1502 aa		33.2	■■■□□ 2.91
STAU1-208	ENST00000437404	ZFYVE16	Q7Z3T8	1539 aa		33.19	■■■□□ 2.9
STAU1-208	ENST00000437404	BCORL1	Q5H9F3	1711 aa		33.19	■■■□□ 2.9
STAU1-208	ENST00000437404	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.18	■■■□□ 2.9
STAU1-208	ENST00000437404	CDC42BPB	Q9Y5S2	1711 aa		33.14	■■■□□ 2.89
STAU1-208	ENST00000437404	PREX2	Q70Z35	1606 aa		33.13	■■■□□ 2.89
STAU1-208	ENST00000437404	YEATS2	Q9ULM3	1422 aa		33.11	■■■□□ 2.89
STAU1-208	ENST00000437404	HECW2	Q9P2P5	1572 aa		33.09	■■■□□ 2.89
STAU1-208	ENST00000437404	ZNF518A	Q6AHZ1	1483 aa		33.09	■■■□□ 2.89
STAU1-208	ENST00000437404	MADD	Q8WXG6	1647 aa		33.06	■■■□□ 2.88
STAU1-208	ENST00000437404	PTPRM	P28827	1452 aa		33.06	■■■□□ 2.88
STAU1-208	ENST00000437404	CEP162	Q5TB80	1403 aa		33.05	■■■□□ 2.88
STAU1-208	ENST00000437404	CDC42BPA	Q5VT25	1732 aa		33.04	■■■□□ 2.88
STAU1-208	ENST00000437404	KDM5C	P41229	1560 aa		33.03	■■■□□ 2.88
STAU1-208	ENST00000437404	SIGLEC1	Q9BZZ2	1709 aa		32.99	■■■□□ 2.87
STAU1-208	ENST00000437404	ATP10A	O60312	1499 aa		32.99	■■■□□ 2.87
STAU1-208	ENST00000437404	ABCC1	P33527	1531 aa		32.98	■■■□□ 2.87
STAU1-208	ENST00000437404	C9orf84	Q5VXU9	1444 aa		32.97	■■■□□ 2.87
STAU1-208	ENST00000437404	RIMS1	Q86UR5	1692 aa	Known RBP	32.96	■■■□□ 2.87
STAU1-208	ENST00000437404	ITSN2	Q9NZM3	1697 aa		32.96	■■■□□ 2.87
STAU1-208	ENST00000437404	AFAP1	Q8N556	730 aa		32.95	■■■□□ 2.87
STAU1-208	ENST00000437404	MTUS2	Q5JR59	1369 aa		32.93	■■■□□ 2.86
STAU1-208	ENST00000437404	MYT1L	Q9UL68	1186 aa		32.9	■■■□□ 2.86
STAU1-208	ENST00000437404	ARHGEF12	Q9NZN5	1544 aa		32.89	■■■□□ 2.86
STAU1-208	ENST00000437404	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.89	■■■□□ 2.86
STAU1-208	ENST00000437404	MLH3	Q9UHC1	1453 aa		32.89	■■■□□ 2.86
STAU1-208	ENST00000437404	FER1L4	A9Z1Z3	1794 aa		32.88	■■■□□ 2.85
STAU1-208	ENST00000437404	DIP2C	Q9Y2E4	1556 aa		32.87	■■■□□ 2.85
STAU1-208	ENST00000437404	TRAPPC8	Q9Y2L5	1435 aa		32.86	■■■□□ 2.85
STAU1-208	ENST00000437404	EHBP1L1	Q8N3D4	1523 aa		32.86	■■■□□ 2.85
STAU1-208	ENST00000437404	SAMD9L	Q8IVG5	1584 aa		32.85	■■■□□ 2.85
STAU1-208	ENST00000437404	CCNB3	Q8WWL7	1395 aa		32.84	■■■□□ 2.85
STAU1-208	ENST00000437404	RERE	Q9P2R6	1566 aa		32.84	■■■□□ 2.85
STAU1-208	ENST00000437404	MLEC	Q14165	292 aa		32.84	■■■□□ 2.85
STAU1-208	ENST00000437404	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.83	■■■□□ 2.85
STAU1-208	ENST00000437404	ABCA6	Q8N139	1617 aa		32.83	■■■□□ 2.85
STAU1-208	ENST00000437404	SYCP2	Q9BX26	1530 aa		32.79	■■■□□ 2.84
STAU1-208	ENST00000437404	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.79	■■■□□ 2.84
STAU1-208	ENST00000437404	PLEKHH2	Q8IVE3	1493 aa		32.79	■■■□□ 2.84
STAU1-208	ENST00000437404	KIDINS220	Q9ULH0	1771 aa		32.78	■■■□□ 2.84
STAU1-208	ENST00000437404	LOC105371045	A0A1W2PR82	267 aa		32.77	■■■□□ 2.84
STAU1-208	ENST00000437404	KIAA1107	Q9UPP5	1409 aa		32.76	■■■□□ 2.83
STAU1-208	ENST00000437404	TIAM1	Q13009	1591 aa		32.75	■■■□□ 2.83
STAU1-208	ENST00000437404	AGL	P35573	1532 aa		32.72	■■■□□ 2.83
STAU1-208	ENST00000437404	LMTK3	Q96Q04	1460 aa		32.71	■■■□□ 2.83
STAU1-208	ENST00000437404	VPS8	Q8N3P4	1428 aa		32.7	■■■□□ 2.83
STAU1-208	ENST00000437404	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.69	■■■□□ 2.82
STAU1-208	ENST00000437404	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.69	■■■□□ 2.82	5e-7	■■■□□ 18.4
STAU1-208	ENST00000437404	PLPPR3	Q6T4P5	718 aa		32.69	■■■□□ 2.82
STAU1-208	ENST00000437404	SPAG9	O60271	1321 aa	Known RBP	32.67	■■■□□ 2.82
STAU1-208	ENST00000437404	ATP7A	Q04656	1500 aa		32.64	■■■□□ 2.82
STAU1-208	ENST00000437404	INO80	Q9ULG1	1556 aa	Predicted RBP	32.62	■■■□□ 2.81
STAU1-208	ENST00000437404	NCOA2	Q15596	1464 aa		32.61	■■■□□ 2.81
STAU1-208	ENST00000437404	ESF1	Q9H501	851 aa	Known RBP	32.56	■■■□□ 2.8
STAU1-208	ENST00000437404	PREX1	Q8TCU6	1659 aa		32.56	■■■□□ 2.8
STAU1-208	ENST00000437404	ZNF644	Q9H582	1327 aa	Predicted RBP	32.55	■■■□□ 2.8
STAU1-208	ENST00000437404	LRRC9	Q6ZRR7	1453 aa		32.54	■■■□□ 2.8
STAU1-208	ENST00000437404	MBD5	Q9P267	1494 aa		32.54	■■■□□ 2.8
STAU1-208	ENST00000437404	MAP3K1	Q13233	1512 aa		32.53	■■■□□ 2.8
STAU1-208	ENST00000437404	ADGB	Q8N7X0	1667 aa		32.51	■■■□□ 2.79
STAU1-208	ENST00000437404	PLXNC1	O60486	1568 aa		32.51	■■■□□ 2.79
STAU1-208	ENST00000437404	CEBPA	P49715	358 aa	Predicted RBP	32.51	■■■□□ 2.79
STAU1-208	ENST00000437404	CNTLN	Q9NXG0	1405 aa		32.51	■■■□□ 2.79
STAU1-208	ENST00000437404	C3	P01024	1663 aa		32.5	■■■□□ 2.79
STAU1-208	ENST00000437404	A2M	P01023	1474 aa		32.5	■■■□□ 2.79
STAU1-208	ENST00000437404	SETD1B	Q9UPS6	1966 aa	Known RBP	32.49	■■■□□ 2.79
STAU1-208	ENST00000437404	CAMSAP2	Q08AD1	1489 aa		32.48	■■■□□ 2.79
STAU1-208	ENST00000437404	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.47	■■■□□ 2.79
STAU1-208	ENST00000437404	HSPA2	P54652	639 aa		32.47	■■■□□ 2.79
STAU1-208	ENST00000437404	CCDC141	Q6ZP82	1450 aa		32.45	■■■□□ 2.79
STAU1-208	ENST00000437404	MROH2A	A6NES4	1674 aa		32.44	■■■□□ 2.78
STAU1-208	ENST00000437404	RSPH4A	Q5TD94	716 aa		32.44	■■■□□ 2.78
STAU1-208	ENST00000437404	UHRF1BP1	Q6BDS2	1440 aa		32.42	■■■□□ 2.78
STAU1-208	ENST00000437404	ILDR1	Q86SU0	546 aa	Predicted RBP	32.39	■■■□□ 2.78
STAU1-208	ENST00000437404	ARHGEF5	Q12774	1597 aa		32.38	■■■□□ 2.77
STAU1-208	ENST00000437404	KANK4	Q5T7N3	995 aa	Predicted RBP	32.36	■■■□□ 2.77
STAU1-208	ENST00000437404	CLTC	Q00610	1675 aa	Known RBP	32.34	■■■□□ 2.77
STAU1-208	ENST00000437404	APLP2	Q06481	763 aa		32.33	■■■□□ 2.77
STAU1-208	ENST00000437404	DHX29	Q7Z478	1369 aa	Known RBP	32.32	■■■□□ 2.76
STAU1-208	ENST00000437404	GGT6	Q6P531	493 aa		32.31	■■■□□ 2.76
STAU1-208	ENST00000437404	PPP6R1	Q9UPN7	881 aa		32.31	■■■□□ 2.76
STAU1-208	ENST00000437404	ZMYM3	Q14202	1370 aa		32.31	■■■□□ 2.76
STAU1-208	ENST00000437404	NPAT	Q14207	1427 aa		32.3	■■■□□ 2.76
STAU1-208	ENST00000437404	MYOM3	Q5VTT5	1437 aa		32.3	■■■□□ 2.76
STAU1-208	ENST00000437404	MIA2	Q96PC5	1412 aa		32.3	■■■□□ 2.76
STAU1-208	ENST00000437404	TSPY4	P0CV99	314 aa		32.29	■■■□□ 2.76
STAU1-208	ENST00000437404	TSPY10	P0CW01	314 aa		32.29	■■■□□ 2.76
STAU1-208	ENST00000437404	MAST1	Q9Y2H9	1570 aa		32.22	■■■□□ 2.75
STAU1-208	ENST00000437404	STRC	Q7RTU9	1775 aa		32.22	■■■□□ 2.75
STAU1-208	ENST00000437404	DMRT2	Q9Y5R5	561 aa		32.19	■■■□□ 2.74
STAU1-208	ENST00000437404	FAM135A	Q9P2D6	1515 aa		32.19	■■■□□ 2.74
STAU1-208	ENST00000437404	KIF3B	O15066	747 aa		32.18	■■■□□ 2.74
STAU1-208	ENST00000437404	FBXO41	Q8TF61	875 aa		32.15	■■■□□ 2.74
STAU1-208	ENST00000437404	PTPRK	Q15262	1439 aa		32.15	■■■□□ 2.74
STAU1-208	ENST00000437404	KDM5D	Q9BY66	1539 aa		32.14	■■■□□ 2.74
STAU1-208	ENST00000437404	MYO3A	Q8NEV4	1616 aa		32.14	■■■□□ 2.74
STAU1-208	ENST00000437404	ZNF142	P52746	1687 aa	Predicted RBP	32.11	■■■□□ 2.73
STAU1-208	ENST00000437404	PTPN23	Q9H3S7	1636 aa		32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms