RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
HMGB1P31-201ENST00000437242 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P31-201ENST00000437242 POTEB3A0JP26 581 aa10.87□□□□□ -0.67
HMGB1P31-201ENST00000437242 POTEBQ6S5H4 581 aa10.87□□□□□ -0.67
HMGB1P31-201ENST00000437242 ERBB3P21860 1342 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
HMGB1P31-201ENST00000437242 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
HMGB1P31-201ENST00000437242 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
HMGB1P31-201ENST00000437242 VARS2Q5ST30 1063 aaKnown RBP10.78□□□□□ -0.68
HMGB1P31-201ENST00000437242 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
HMGB1P31-201ENST00000437242 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
HMGB1P31-201ENST00000437242 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
HMGB1P31-201ENST00000437242 KIF3CO14782 793 aa10.75□□□□□ -0.69
HMGB1P31-201ENST00000437242 ARSIQ5FYB1 569 aa10.74□□□□□ -0.69
HMGB1P31-201ENST00000437242 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
HMGB1P31-201ENST00000437242 PPP1R37O75864 691 aa10.72□□□□□ -0.69
HMGB1P31-201ENST00000437242 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
HMGB1P31-201ENST00000437242 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGB1P31-201ENST00000437242 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
HMGB1P31-201ENST00000437242 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P31-201ENST00000437242 SLC34A2O95436 690 aa10.64□□□□□ -0.71
HMGB1P31-201ENST00000437242 NUDT7P0C024 238 aa10.64□□□□□ -0.71
HMGB1P31-201ENST00000437242 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
HMGB1P31-201ENST00000437242 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
HMGB1P31-201ENST00000437242 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
HMGB1P31-201ENST00000437242 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
HMGB1P31-201ENST00000437242 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
HMGB1P31-201ENST00000437242 FOXK1P85037 733 aa10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 RNF166Q96A37 237 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
HMGB1P31-201ENST00000437242 PTGER2P43116 358 aa10.54□□□□□ -0.72
HMGB1P31-201ENST00000437242 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
HMGB1P31-201ENST00000437242 PBX2P40425 430 aa10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 LSM11P83369 360 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 DSG2Q14126 1118 aa10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
HMGB1P31-201ENST00000437242 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
HMGB1P31-201ENST00000437242 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P31-201ENST00000437242 TBC1D12O60347 775 aa10.48□□□□□ -0.73
HMGB1P31-201ENST00000437242 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
HMGB1P31-201ENST00000437242 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
HMGB1P31-201ENST00000437242 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
HMGB1P31-201ENST00000437242 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 PDE4AP27815 886 aa10.4□□□□□ -0.74
HMGB1P31-201ENST00000437242 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
HMGB1P31-201ENST00000437242 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
HMGB1P31-201ENST00000437242 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
HMGB1P31-201ENST00000437242 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
HMGB1P31-201ENST00000437242 PSEN2P49810 448 aa10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
HMGB1P31-201ENST00000437242 TK2O00142 265 aa10.33□□□□□ -0.76
HMGB1P31-201ENST00000437242 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
HMGB1P31-201ENST00000437242 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
HMGB1P31-201ENST00000437242 MFSD10Q14728 455 aa10.29□□□□□ -0.76
HMGB1P31-201ENST00000437242 EVI5O60447 810 aa10.28□□□□□ -0.76
HMGB1P31-201ENST00000437242 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
HMGB1P31-201ENST00000437242 HRO43593 1189 aa10.27□□□□□ -0.77
HMGB1P31-201ENST00000437242 FOSBP53539 338 aa10.27□□□□□ -0.77
HMGB1P31-201ENST00000437242 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
HMGB1P31-201ENST00000437242 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
HMGB1P31-201ENST00000437242 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
HMGB1P31-201ENST00000437242 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
HMGB1P31-201ENST00000437242 PTPREP23469 700 aa10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
HMGB1P31-201ENST00000437242 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
HMGB1P31-201ENST00000437242 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
HMGB1P31-201ENST00000437242 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
HMGB1P31-201ENST00000437242 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P31-201ENST00000437242 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
HMGB1P31-201ENST00000437242 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
HMGB1P31-201ENST00000437242 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
HMGB1P31-201ENST00000437242 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P31-201ENST00000437242 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
HMGB1P31-201ENST00000437242 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
HMGB1P31-201ENST00000437242 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 DPYSL4O14531 572 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 PHF14O94880 888 aa10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 PTPN5P54829 565 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms