RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 CDC42BPBQ9Y5S2 1711 aa16.13■□□□□ 0.17
LINC01039-201ENST00000437113 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
LINC01039-201ENST00000437113 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
LINC01039-201ENST00000437113 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
LINC01039-201ENST00000437113 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
LINC01039-201ENST00000437113 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
LINC01039-201ENST00000437113 AKNAQ7Z591 1439 aa16.1■□□□□ 0.17
LINC01039-201ENST00000437113 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
LINC01039-201ENST00000437113 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
LINC01039-201ENST00000437113 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
LINC01039-201ENST00000437113 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
LINC01039-201ENST00000437113 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
LINC01039-201ENST00000437113 RICTORQ6R327 1708 aa16.03■□□□□ 0.16
LINC01039-201ENST00000437113 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
LINC01039-201ENST00000437113 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.15
LINC01039-201ENST00000437113 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.15
LINC01039-201ENST00000437113 ABCC1P33527 1531 aa16■□□□□ 0.15
LINC01039-201ENST00000437113 TRIM26Q12899 539 aaPredicted RBP16■□□□□ 0.15
LINC01039-201ENST00000437113 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
LINC01039-201ENST00000437113 POGZQ7Z3K3 1410 aa15.99■□□□□ 0.15
LINC01039-201ENST00000437113 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
LINC01039-201ENST00000437113 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
LINC01039-201ENST00000437113 ZNF518AQ6AHZ1 1483 aa15.98■□□□□ 0.15
LINC01039-201ENST00000437113 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
LINC01039-201ENST00000437113 RAPGEF3O95398 923 aa15.98■□□□□ 0.15
LINC01039-201ENST00000437113 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
LINC01039-201ENST00000437113 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
LINC01039-201ENST00000437113 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
LINC01039-201ENST00000437113 ZMYM4Q5VZL5 1548 aa15.97■□□□□ 0.15
LINC01039-201ENST00000437113 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
LINC01039-201ENST00000437113 MAGI2Q86UL8 1455 aa15.96■□□□□ 0.14
LINC01039-201ENST00000437113 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
LINC01039-201ENST00000437113 KDM5CP41229 1560 aa15.94■□□□□ 0.14
LINC01039-201ENST00000437113 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
LINC01039-201ENST00000437113 CAMSAP2Q08AD1 1489 aa15.93■□□□□ 0.14
LINC01039-201ENST00000437113 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
LINC01039-201ENST00000437113 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
LINC01039-201ENST00000437113 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
LINC01039-201ENST00000437113 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
LINC01039-201ENST00000437113 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
LINC01039-201ENST00000437113 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC01039-201ENST00000437113 AFAP1Q8N556 730 aa15.9■□□□□ 0.14
LINC01039-201ENST00000437113 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
LINC01039-201ENST00000437113 ZNF644Q9H582 1327 aaPredicted RBP15.9■□□□□ 0.14
LINC01039-201ENST00000437113 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
LINC01039-201ENST00000437113 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
LINC01039-201ENST00000437113 ARHGEF40Q8TER5 1519 aa15.89■□□□□ 0.13
LINC01039-201ENST00000437113 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
LINC01039-201ENST00000437113 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
LINC01039-201ENST00000437113 CCDC141Q6ZP82 1450 aa15.87■□□□□ 0.13
LINC01039-201ENST00000437113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01039-201ENST00000437113 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
LINC01039-201ENST00000437113 SPAG9O60271 1321 aaKnown RBP15.86■□□□□ 0.13
LINC01039-201ENST00000437113 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
LINC01039-201ENST00000437113 DNMT1P26358 1616 aaKnown RBP15.85■□□□□ 0.13
LINC01039-201ENST00000437113 CROCC2H7BZ55 1655 aa15.85■□□□□ 0.13
LINC01039-201ENST00000437113 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
LINC01039-201ENST00000437113 INO80Q9ULG1 1556 aaPredicted RBP15.84■□□□□ 0.13
LINC01039-201ENST00000437113 ITGAEP38570 1179 aa15.84■□□□□ 0.13
LINC01039-201ENST00000437113 ATP10AO60312 1499 aa15.84■□□□□ 0.13
LINC01039-201ENST00000437113 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
LINC01039-201ENST00000437113 TSPY4P0CV99 314 aa15.83■□□□□ 0.12
LINC01039-201ENST00000437113 TSPY10P0CW01 314 aa15.83■□□□□ 0.12
LINC01039-201ENST00000437113 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
LINC01039-201ENST00000437113 REREQ9P2R6 1566 aa15.82■□□□□ 0.12
LINC01039-201ENST00000437113 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
LINC01039-201ENST00000437113 C9orf84Q5VXU9 1444 aa15.81■□□□□ 0.12
LINC01039-201ENST00000437113 ABCA6Q8N139 1617 aa15.81■□□□□ 0.12
LINC01039-201ENST00000437113 ADGBQ8N7X0 1667 aa15.81■□□□□ 0.12
LINC01039-201ENST00000437113 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
LINC01039-201ENST00000437113 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
LINC01039-201ENST00000437113 DAPK1P53355 1430 aa15.78■□□□□ 0.12
LINC01039-201ENST00000437113 ABCC5O15440 1437 aa15.77■□□□□ 0.11
LINC01039-201ENST00000437113 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
LINC01039-201ENST00000437113 AGLP35573 1532 aa15.75■□□□□ 0.11
LINC01039-201ENST00000437113 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
LINC01039-201ENST00000437113 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
LINC01039-201ENST00000437113 A2MP01023 1474 aa15.74■□□□□ 0.11
LINC01039-201ENST00000437113 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
LINC01039-201ENST00000437113 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
LINC01039-201ENST00000437113 DHX29Q7Z478 1369 aaKnown RBP15.71■□□□□ 0.11
LINC01039-201ENST00000437113 ADAMTSL3P82987 1691 aa15.7■□□□□ 0.1
LINC01039-201ENST00000437113 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
LINC01039-201ENST00000437113 ANKRD30AQ9BXX3 1397 aa15.7■□□□□ 0.1
LINC01039-201ENST00000437113 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
LINC01039-201ENST00000437113 ADGRL2O95490 1459 aa15.69■□□□□ 0.1
LINC01039-201ENST00000437113 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
LINC01039-201ENST00000437113 KDM4FA0A1W2PPD8 638 aa15.67■□□□□ 0.1
LINC01039-201ENST00000437113 EIF2AK4Q9P2K8 1649 aaKnown RBP15.67■□□□□ 0.1
LINC01039-201ENST00000437113 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
LINC01039-201ENST00000437113 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
LINC01039-201ENST00000437113 KIF15Q9NS87 1388 aa15.66■□□□□ 0.1
LINC01039-201ENST00000437113 FER1L4A9Z1Z3 1794 aa15.66■□□□□ 0.1
LINC01039-201ENST00000437113 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
LINC01039-201ENST00000437113 ERBINQ96RT1 1412 aa15.64■□□□□ 0.09
LINC01039-201ENST00000437113 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
LINC01039-201ENST00000437113 MADDQ8WXG6 1647 aa15.64■□□□□ 0.09
LINC01039-201ENST00000437113 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
LINC01039-201ENST00000437113 MLECQ14165 292 aa15.63■□□□□ 0.09
LINC01039-201ENST00000437113 RRP7BPQ9NSQ0 103 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms