RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 EIF4G1Q04637 1599 aaKnown RBP7.25□□□□□ -1.25
CAST-209ENST00000437034 E9PSI1 815 aa7.25□□□□□ -1.25
CAST-209ENST00000437034 SMARCA2P51531 1590 aa7.25□□□□□ -1.25
CAST-209ENST00000437034 FOXD4L6Q3SYB3 417 aaPredicted RBP7.24□□□□□ -1.25
CAST-209ENST00000437034 FOXD4L3Q6VB84 417 aaPredicted RBP7.24□□□□□ -1.25
CAST-209ENST00000437034 PLCD3Q8N3E9 789 aa7.24□□□□□ -1.25
CAST-209ENST00000437034 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
CAST-209ENST00000437034 SOX12O15370 315 aa7.23□□□□□ -1.25
CAST-209ENST00000437034 MAFGO15525 162 aa7.23□□□□□ -1.25
CAST-209ENST00000437034 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
CAST-209ENST00000437034 SPRYD3Q8NCJ5 442 aa7.22□□□□□ -1.25
CAST-209ENST00000437034 LAS1LQ9Y4W2 734 aaKnown RBP7.22□□□□□ -1.25
CAST-209ENST00000437034 STAC3Q96MF2 364 aa7.21□□□□□ -1.25
CAST-209ENST00000437034 GZF1Q9H116 711 aaPredicted RBP7.21□□□□□ -1.25
CAST-209ENST00000437034 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.26
CAST-209ENST00000437034 PKD2Q13563 968 aa7.2□□□□□ -1.26
CAST-209ENST00000437034 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
CAST-209ENST00000437034 SMARCA4P51532 1647 aa7.2□□□□□ -1.26
CAST-209ENST00000437034 CLGNO14967 610 aa7.2□□□□□ -1.26
CAST-209ENST00000437034 HSP90AB4PQ58FF6 505 aa7.2□□□□□ -1.26
CAST-209ENST00000437034 APPP05067 770 aa7.19□□□□□ -1.26
CAST-209ENST00000437034 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
CAST-209ENST00000437034 NOL8Q76FK4 1167 aaKnown RBP7.19□□□□□ -1.26
CAST-209ENST00000437034 BRD1O95696 1058 aa7.17□□□□□ -1.26
CAST-209ENST00000437034 LOC102724159A0A0B4J2E5 919 aa7.17□□□□□ -1.26
CAST-209ENST00000437034 PWP2Q15269 919 aaKnown RBP7.17□□□□□ -1.26
CAST-209ENST00000437034 HMGXB3Q12766 1538 aa7.17□□□□□ -1.26
CAST-209ENST00000437034 SCRIBQ14160 1630 aa7.17□□□□□ -1.26
CAST-209ENST00000437034 EXOC8Q8IYI6 725 aa7.17□□□□□ -1.26
CAST-209ENST00000437034 SMARCA5O60264 1052 aaPredicted RBP7.16□□□□□ -1.26
CAST-209ENST00000437034 PHF14O94880 888 aa7.16□□□□□ -1.26
CAST-209ENST00000437034 ZNF622Q969S3 477 aaKnown RBP eCLIP7.16□□□□□ -1.261e-7■■□□□ 14.4
CAST-209ENST00000437034 FOXD4L1Q9NU39 408 aa7.16□□□□□ -1.26
CAST-209ENST00000437034 CCDC82Q8N4S0 544 aa7.16□□□□□ -1.26
CAST-209ENST00000437034 CDCA8Q53HL2 280 aa7.15□□□□□ -1.27
CAST-209ENST00000437034 SGSM3Q96HU1 749 aa7.14□□□□□ -1.27
CAST-209ENST00000437034 HDAC5Q9UQL6 1122 aa7.14□□□□□ -1.27
CAST-209ENST00000437034 RIPOR2Q9Y4F9 1068 aa7.11□□□□□ -1.27
CAST-209ENST00000437034 HSP90AA2PQ14568 343 aaPredicted RBP7.11□□□□□ -1.27
CAST-209ENST00000437034 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
CAST-209ENST00000437034 RRP9O43818 475 aaKnown RBP7.11□□□□□ -1.27
CAST-209ENST00000437034 KAT6BQ8WYB5 2073 aa7.11□□□□□ -1.27
CAST-209ENST00000437034 MAPK8IP2Q13387 824 aaPredicted RBP7.1□□□□□ -1.27
CAST-209ENST00000437034 SPTY2D1Q68D10 685 aaPredicted RBP7.1□□□□□ -1.27
CAST-209ENST00000437034 IRX3P78415 501 aaPredicted RBP7.09□□□□□ -1.27
CAST-209ENST00000437034 MYCNP04198 464 aaPredicted RBP7.09□□□□□ -1.27
CAST-209ENST00000437034 FBXW7Q969H0 707 aa7.09□□□□□ -1.27
CAST-209ENST00000437034 ZNF830Q96NB3 372 aaPredicted RBP7.09□□□□□ -1.27
CAST-209ENST00000437034 TOP2AP11388 1531 aaKnown RBP7.08□□□□□ -1.28
CAST-209ENST00000437034 RGS3P49796 1198 aa7.07□□□□□ -1.28
CAST-209ENST00000437034 CADPSQ9ULU8 1353 aa7.07□□□□□ -1.28
CAST-209ENST00000437034 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
CAST-209ENST00000437034 SPINK5Q9NQ38 1064 aaPredicted RBP7.07□□□□□ -1.28
CAST-209ENST00000437034 MARCH6O60337 910 aa7.06□□□□□ -1.28
CAST-209ENST00000437034 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
CAST-209ENST00000437034 RBM27Q9P2N5 1060 aaKnown RBP7.05□□□□□ -1.28
CAST-209ENST00000437034 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
CAST-209ENST00000437034 LMOD2Q6P5Q4 547 aa7.05□□□□□ -1.28
CAST-209ENST00000437034 APBB1IPQ7Z5R6 666 aaPredicted RBP7.05□□□□□ -1.28
CAST-209ENST00000437034 MPNDQ8N594 471 aa7.05□□□□□ -1.28
CAST-209ENST00000437034 GPBP1L1Q9HC44 474 aaPredicted RBP7.05□□□□□ -1.28
CAST-209ENST00000437034 PCGF6Q9BYE7 350 aa7.05□□□□□ -1.28
CAST-209ENST00000437034 ARMCX6Q7L4S7 300 aa7.04□□□□□ -1.28
CAST-209ENST00000437034 SLC24A3Q9HC58 644 aa7.04□□□□□ -1.28
CAST-209ENST00000437034 DNAJC5Q9H3Z4 198 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 FOSBP53539 338 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 PPP4R3CPQ6ZMV5 832 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 VGLL3A8MV65 326 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 RINLQ6ZS11 566 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 SLC52A1Q9NWF4 448 aa7.03□□□□□ -1.28
CAST-209ENST00000437034 TPD52L2O43399 206 aaKnown RBP7.02□□□□□ -1.29
CAST-209ENST00000437034 POLD1P28340 1107 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
CAST-209ENST00000437034 GORABQ5T7V8 394 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 ANP32BQ92688 251 aaKnown RBP7.02□□□□□ -1.29
CAST-209ENST00000437034 SH3BP1Q9Y3L3 701 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 PEX14O75381 377 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 TERF2IPQ9NYB0 399 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 STK24Q9Y6E0 443 aa7.02□□□□□ -1.29
CAST-209ENST00000437034 MKRN3Q13064 507 aaKnown RBP7.01□□□□□ -1.29
CAST-209ENST00000437034 IFNLR1Q8IU57 520 aaPredicted RBP7.01□□□□□ -1.29
CAST-209ENST00000437034 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
CAST-209ENST00000437034 MROH2BQ7Z745 1585 aa7.01□□□□□ -1.29
CAST-209ENST00000437034 NCAPD3P42695 1498 aa7□□□□□ -1.29
CAST-209ENST00000437034 PRDM4Q9UKN5 801 aa7□□□□□ -1.29
CAST-209ENST00000437034 PPME1Q9Y570 386 aa7□□□□□ -1.29
CAST-209ENST00000437034 CALD1Q05682 793 aaKnown RBP7□□□□□ -1.29
CAST-209ENST00000437034 FOXD4Q12950 439 aaPredicted RBP7□□□□□ -1.29
CAST-209ENST00000437034 ANKRD13AQ8IZ07 590 aa7□□□□□ -1.29
CAST-209ENST00000437034 DNAJC5BQ9UF47 199 aa7□□□□□ -1.29
CAST-209ENST00000437034 MMP14P50281 582 aa7□□□□□ -1.29
CAST-209ENST00000437034 PPP1R1BQ9UD71 204 aaPredicted RBP6.99□□□□□ -1.29
CAST-209ENST00000437034 WIZO95785 1651 aa6.99□□□□□ -1.29
CAST-209ENST00000437034 TTC36A6NLP5 189 aa6.99□□□□□ -1.29
CAST-209ENST00000437034 TRAIPQ9BWF2 469 aa6.99□□□□□ -1.29
CAST-209ENST00000437034 RSF1Q96T23 1441 aaPredicted RBP6.99□□□□□ -1.29
CAST-209ENST00000437034 CASC1Q6TDU7 716 aa6.99□□□□□ -1.29
CAST-209ENST00000437034 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
CAST-209ENST00000437034 CCER2I3L3R5 266 aa6.98□□□□□ -1.29
CAST-209ENST00000437034 ANKRD62A6NC57 917 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms