RNA–Protein interactions for RNA: ENST00000436395.1

LINC02558-202, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5 BASIC

Gene LINC02558, Length 298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-202ENST00000436395 ZFYVE16Q7Z3T8 1539 aa26.98■■□□□ 1.91
LINC02558-202ENST00000436395 POGZQ7Z3K3 1410 aa26.98■■□□□ 1.91
LINC02558-202ENST00000436395 SIGLEC1Q9BZZ2 1709 aa26.96■■□□□ 1.91
LINC02558-202ENST00000436395 MAGI2Q86UL8 1455 aa26.95■■□□□ 1.91
LINC02558-202ENST00000436395 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
LINC02558-202ENST00000436395 EFCAB2Q5VUJ9 269 aa26.94■■□□□ 1.9
LINC02558-202ENST00000436395 CASKIN1Q8WXD9 1431 aa26.93■■□□□ 1.9
LINC02558-202ENST00000436395 CLIP1P30622 1438 aa26.92■■□□□ 1.9
LINC02558-202ENST00000436395 RIMS1Q86UR5 1692 aaKnown RBP26.91■■□□□ 1.9
LINC02558-202ENST00000436395 ARHGAP5Q13017 1502 aa26.89■■□□□ 1.89
LINC02558-202ENST00000436395 ILDR1Q86SU0 546 aaPredicted RBP26.88■■□□□ 1.89
LINC02558-202ENST00000436395 CCDC18Q5T9S5 1454 aa26.87■■□□□ 1.89
LINC02558-202ENST00000436395 CDC42BPBQ9Y5S2 1711 aa26.84■■□□□ 1.89
LINC02558-202ENST00000436395 ATP10AO60312 1499 aa26.82■■□□□ 1.88
LINC02558-202ENST00000436395 ZNF518AQ6AHZ1 1483 aa26.81■■□□□ 1.88
LINC02558-202ENST00000436395 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
LINC02558-202ENST00000436395 MLECQ14165 292 aa26.8■■□□□ 1.88
LINC02558-202ENST00000436395 C9orf84Q5VXU9 1444 aa26.8■■□□□ 1.88
LINC02558-202ENST00000436395 KDM5CP41229 1560 aa26.8■■□□□ 1.88
LINC02558-202ENST00000436395 PREX2Q70Z35 1606 aa26.79■■□□□ 1.88
LINC02558-202ENST00000436395 AFAP1Q8N556 730 aa26.79■■□□□ 1.88
LINC02558-202ENST00000436395 LMTK3Q96Q04 1460 aa26.79■■□□□ 1.88
LINC02558-202ENST00000436395 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.88
LINC02558-202ENST00000436395 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
LINC02558-202ENST00000436395 ABCC1P33527 1531 aa26.74■■□□□ 1.87
LINC02558-202ENST00000436395 ARHGEF12Q9NZN5 1544 aa26.74■■□□□ 1.87
LINC02558-202ENST00000436395 CDC42BPAQ5VT25 1732 aa26.73■■□□□ 1.87
LINC02558-202ENST00000436395 TRAPPC8Q9Y2L5 1435 aa26.71■■□□□ 1.87
LINC02558-202ENST00000436395 DIP2CQ9Y2E4 1556 aa26.71■■□□□ 1.87
LINC02558-202ENST00000436395 ITSN2Q9NZM3 1697 aa26.7■■□□□ 1.86
LINC02558-202ENST00000436395 MLH3Q9UHC1 1453 aa26.68■■□□□ 1.86
LINC02558-202ENST00000436395 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
LINC02558-202ENST00000436395 ABCA6Q8N139 1617 aa26.68■■□□□ 1.86
LINC02558-202ENST00000436395 REREQ9P2R6 1566 aa26.65■■□□□ 1.86
LINC02558-202ENST00000436395 HSPA2P54652 639 aa26.64■■□□□ 1.86
LINC02558-202ENST00000436395 GPATCH8Q9UKJ3 1502 aaKnown RBP26.63■■□□□ 1.85
LINC02558-202ENST00000436395 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
LINC02558-202ENST00000436395 KIDINS220Q9ULH0 1771 aa26.6■■□□□ 1.85
LINC02558-202ENST00000436395 ZNF777Q9ULD5 760 aaPredicted RBP26.59■■□□□ 1.85
LINC02558-202ENST00000436395 CEBPAP49715 358 aaPredicted RBP26.58■■□□□ 1.85
LINC02558-202ENST00000436395 AGLP35573 1532 aa26.56■■□□□ 1.84
LINC02558-202ENST00000436395 SYCP2Q9BX26 1530 aa26.56■■□□□ 1.84
LINC02558-202ENST00000436395 MTUS2Q5JR59 1369 aa26.54■■□□□ 1.84
LINC02558-202ENST00000436395 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
LINC02558-202ENST00000436395 PREX1Q8TCU6 1659 aa26.53■■□□□ 1.84
LINC02558-202ENST00000436395 HNRNPMP52272 730 aaKnown RBP eCLIP26.52■■□□□ 1.84
LINC02558-202ENST00000436395 CCNB3Q8WWL7 1395 aa26.51■■□□□ 1.83
LINC02558-202ENST00000436395 CFDP1Q9UEE9 299 aaPredicted RBP26.51■■□□□ 1.83
LINC02558-202ENST00000436395 KIAA1107Q9UPP5 1409 aa26.49■■□□□ 1.83
LINC02558-202ENST00000436395 SPAG9O60271 1321 aaKnown RBP26.48■■□□□ 1.83
LINC02558-202ENST00000436395 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
LINC02558-202ENST00000436395 PLEKHH2Q8IVE3 1493 aa26.47■■□□□ 1.83
LINC02558-202ENST00000436395 C3P01024 1663 aa26.47■■□□□ 1.83
LINC02558-202ENST00000436395 EHBP1L1Q8N3D4 1523 aa26.46■■□□□ 1.83
LINC02558-202ENST00000436395 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
LINC02558-202ENST00000436395 SETD1BQ9UPS6 1966 aaKnown RBP26.45■■□□□ 1.82
LINC02558-202ENST00000436395 ATP7AQ04656 1500 aa26.44■■□□□ 1.82
LINC02558-202ENST00000436395 INO80Q9ULG1 1556 aaPredicted RBP26.43■■□□□ 1.82
LINC02558-202ENST00000436395 ESF1Q9H501 851 aaKnown RBP26.42■■□□□ 1.82
LINC02558-202ENST00000436395 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
LINC02558-202ENST00000436395 ZNF644Q9H582 1327 aaPredicted RBP26.4■■□□□ 1.82
LINC02558-202ENST00000436395 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.82
LINC02558-202ENST00000436395 CNTLNQ9NXG0 1405 aa26.39■■□□□ 1.81
LINC02558-202ENST00000436395 PLXNC1O60486 1568 aa26.37■■□□□ 1.81
LINC02558-202ENST00000436395 A2MP01023 1474 aa26.36■■□□□ 1.81
LINC02558-202ENST00000436395 MBD5Q9P267 1494 aa26.36■■□□□ 1.81
LINC02558-202ENST00000436395 STRCQ7RTU9 1775 aa26.35■■□□□ 1.81
LINC02558-202ENST00000436395 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
LINC02558-202ENST00000436395 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
LINC02558-202ENST00000436395 NCOA2Q15596 1464 aa26.31■■□□□ 1.8
LINC02558-202ENST00000436395 ADGBQ8N7X0 1667 aa26.29■■□□□ 1.8
LINC02558-202ENST00000436395 ZMYM3Q14202 1370 aa26.29■■□□□ 1.8
LINC02558-202ENST00000436395 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
LINC02558-202ENST00000436395 CERKQ8TCT0 537 aa26.27■■□□□ 1.8
LINC02558-202ENST00000436395 RTEL1-TNFRSF6BF6WH68 1400 aa26.25■■□□□ 1.79
LINC02558-202ENST00000436395 NPATQ14207 1427 aa26.25■■□□□ 1.79
LINC02558-202ENST00000436395 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
LINC02558-202ENST00000436395 DMRT2Q9Y5R5 561 aa26.25■■□□□ 1.79
LINC02558-202ENST00000436395 GGT6Q6P531 493 aa26.24■■□□□ 1.79
LINC02558-202ENST00000436395 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
LINC02558-202ENST00000436395 CCDC141Q6ZP82 1450 aa26.22■■□□□ 1.79
LINC02558-202ENST00000436395 LRRC9Q6ZRR7 1453 aa26.19■■□□□ 1.78
LINC02558-202ENST00000436395 PTPRTO14522 1441 aa26.19■■□□□ 1.78
LINC02558-202ENST00000436395 DHX29Q7Z478 1369 aaKnown RBP26.19■■□□□ 1.78
LINC02558-202ENST00000436395 NCOA1Q15788 1441 aa26.18■■□□□ 1.78
LINC02558-202ENST00000436395 PTPRKQ15262 1439 aa26.17■■□□□ 1.78
LINC02558-202ENST00000436395 PPP6R1Q9UPN7 881 aa26.16■■□□□ 1.78
LINC02558-202ENST00000436395 CAMSAP1Q5T5Y3 1602 aa26.14■■□□□ 1.78
LINC02558-202ENST00000436395 RSPH4AQ5TD94 716 aa26.14■■□□□ 1.78
LINC02558-202ENST00000436395 MYO3AQ8NEV4 1616 aa26.14■■□□□ 1.77
LINC02558-202ENST00000436395 ARHGEF5Q12774 1597 aa26.13■■□□□ 1.77
LINC02558-202ENST00000436395 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
LINC02558-202ENST00000436395 ZNF142P52746 1687 aaPredicted RBP26.11■■□□□ 1.77
LINC02558-202ENST00000436395 MAP3K1Q13233 1512 aa26.1■■□□□ 1.77
LINC02558-202ENST00000436395 KIF3BO15066 747 aa26.1■■□□□ 1.77
LINC02558-202ENST00000436395 CEP170BQ9Y4F5 1589 aaPredicted RBP26.08■■□□□ 1.77
LINC02558-202ENST00000436395 TSPY4P0CV99 314 aa26.05■■□□□ 1.76
LINC02558-202ENST00000436395 TSPY10P0CW01 314 aa26.05■■□□□ 1.76
LINC02558-202ENST00000436395 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
LINC02558-202ENST00000436395 NCKAP5LQ9HCH0 1330 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms