RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
AP001048.1-201ENST00000436359 ARID3CA6NKF2 412 aa12.18□□□□□ -0.46
AP001048.1-201ENST00000436359 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
AP001048.1-201ENST00000436359 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
AP001048.1-201ENST00000436359 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
AP001048.1-201ENST00000436359 ABCC1P33527 1531 aa12.17□□□□□ -0.46
AP001048.1-201ENST00000436359 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
AP001048.1-201ENST00000436359 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
AP001048.1-201ENST00000436359 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
AP001048.1-201ENST00000436359 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
AP001048.1-201ENST00000436359 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
AP001048.1-201ENST00000436359 FYCO1Q9BQS8 1478 aa12.15□□□□□ -0.46
AP001048.1-201ENST00000436359 CASKIN1Q8WXD9 1431 aa12.15□□□□□ -0.46
AP001048.1-201ENST00000436359 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
AP001048.1-201ENST00000436359 KIDINS220Q9ULH0 1771 aa12.14□□□□□ -0.47
AP001048.1-201ENST00000436359 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
AP001048.1-201ENST00000436359 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
AP001048.1-201ENST00000436359 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
AP001048.1-201ENST00000436359 AGLP35573 1532 aa12.12□□□□□ -0.47
AP001048.1-201ENST00000436359 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
AP001048.1-201ENST00000436359 ATP10AO60312 1499 aa12.11□□□□□ -0.47
AP001048.1-201ENST00000436359 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
AP001048.1-201ENST00000436359 CLIP1P30622 1438 aa12.11□□□□□ -0.47
AP001048.1-201ENST00000436359 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
AP001048.1-201ENST00000436359 C3P01024 1663 aa12.09□□□□□ -0.47
AP001048.1-201ENST00000436359 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
AP001048.1-201ENST00000436359 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
AP001048.1-201ENST00000436359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
AP001048.1-201ENST00000436359 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
AP001048.1-201ENST00000436359 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
AP001048.1-201ENST00000436359 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
AP001048.1-201ENST00000436359 STRCQ7RTU9 1775 aa12.07□□□□□ -0.48
AP001048.1-201ENST00000436359 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
AP001048.1-201ENST00000436359 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
AP001048.1-201ENST00000436359 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
AP001048.1-201ENST00000436359 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.48
AP001048.1-201ENST00000436359 UBTFP17480 764 aaKnown RBP12.02□□□□□ -0.49
AP001048.1-201ENST00000436359 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.49
AP001048.1-201ENST00000436359 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
AP001048.1-201ENST00000436359 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
AP001048.1-201ENST00000436359 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
AP001048.1-201ENST00000436359 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
AP001048.1-201ENST00000436359 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
AP001048.1-201ENST00000436359 KIAA1107Q9UPP5 1409 aa12□□□□□ -0.49
AP001048.1-201ENST00000436359 ATP7AQ04656 1500 aa12□□□□□ -0.49
AP001048.1-201ENST00000436359 PLEKHH2Q8IVE3 1493 aa11.98□□□□□ -0.49
AP001048.1-201ENST00000436359 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
AP001048.1-201ENST00000436359 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
AP001048.1-201ENST00000436359 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
AP001048.1-201ENST00000436359 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
AP001048.1-201ENST00000436359 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
AP001048.1-201ENST00000436359 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
AP001048.1-201ENST00000436359 NPATQ14207 1427 aa11.94□□□□□ -0.5
AP001048.1-201ENST00000436359 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
AP001048.1-201ENST00000436359 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
AP001048.1-201ENST00000436359 AFAP1Q8N556 730 aa11.93□□□□□ -0.5
AP001048.1-201ENST00000436359 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
AP001048.1-201ENST00000436359 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
AP001048.1-201ENST00000436359 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
AP001048.1-201ENST00000436359 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
AP001048.1-201ENST00000436359 PTPRTO14522 1441 aa11.89□□□□□ -0.51
AP001048.1-201ENST00000436359 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
AP001048.1-201ENST00000436359 A2MP01023 1474 aa11.89□□□□□ -0.51
AP001048.1-201ENST00000436359 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
AP001048.1-201ENST00000436359 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
AP001048.1-201ENST00000436359 PLA2R1Q13018 1463 aa11.88□□□□□ -0.51
AP001048.1-201ENST00000436359 MAST1Q9Y2H9 1570 aa11.88□□□□□ -0.51
AP001048.1-201ENST00000436359 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
AP001048.1-201ENST00000436359 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
AP001048.1-201ENST00000436359 RNF17Q9BXT8 1623 aaKnown RBP11.87□□□□□ -0.51
AP001048.1-201ENST00000436359 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
AP001048.1-201ENST00000436359 HSPA2P54652 639 aa11.87□□□□□ -0.51
AP001048.1-201ENST00000436359 ATP1B4Q9UN42 357 aaPredicted RBP11.86□□□□□ -0.51
AP001048.1-201ENST00000436359 ZC3H13Q5T200 1668 aaKnown RBP11.86□□□□□ -0.51
AP001048.1-201ENST00000436359 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
AP001048.1-201ENST00000436359 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
AP001048.1-201ENST00000436359 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
AP001048.1-201ENST00000436359 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
AP001048.1-201ENST00000436359 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 MLECQ14165 292 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 CAMSAP1Q5T5Y3 1602 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 CROCC2H7BZ55 1655 aa11.84□□□□□ -0.51
AP001048.1-201ENST00000436359 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
AP001048.1-201ENST00000436359 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
AP001048.1-201ENST00000436359 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
AP001048.1-201ENST00000436359 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
AP001048.1-201ENST00000436359 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
AP001048.1-201ENST00000436359 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
AP001048.1-201ENST00000436359 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
AP001048.1-201ENST00000436359 PZPP20742 1482 aa11.8□□□□□ -0.52
AP001048.1-201ENST00000436359 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
AP001048.1-201ENST00000436359 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
AP001048.1-201ENST00000436359 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
AP001048.1-201ENST00000436359 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
AP001048.1-201ENST00000436359 A2ML1A8K2U0 1454 aa11.78□□□□□ -0.52
AP001048.1-201ENST00000436359 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms