RNA–Protein interactions for RNA: ENST00000435991.2

TRAPPC13P1-201, Transcript of trafficking protein particle complex 13 pseudogene 1, humanhuman

BASIC

Gene TRAPPC13P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13P1-201ENST00000435991 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
TRAPPC13P1-201ENST00000435991 HS3ST6Q96QI5 342 aa13.22□□□□□ -0.29
TRAPPC13P1-201ENST00000435991 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
TRAPPC13P1-201ENST00000435991 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
TRAPPC13P1-201ENST00000435991 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
TRAPPC13P1-201ENST00000435991 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
TRAPPC13P1-201ENST00000435991 KIF3CO14782 793 aa13.18□□□□□ -0.3
TRAPPC13P1-201ENST00000435991 PPP1R37O75864 691 aa13.15□□□□□ -0.3
TRAPPC13P1-201ENST00000435991 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
TRAPPC13P1-201ENST00000435991 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 C2orf72A6NCS6 295 aa13.13□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 ERBB3P21860 1342 aa13.11□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 KRTAP3-3Q9BYR6 98 aa13.1□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 KRTAP3-2Q9BYR7 98 aa13.1□□□□□ -0.31
TRAPPC13P1-201ENST00000435991 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 SLC34A2O95436 690 aa13.03□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 VARS2Q5ST30 1063 aaKnown RBP13.03□□□□□ -0.32
TRAPPC13P1-201ENST00000435991 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
TRAPPC13P1-201ENST00000435991 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
TRAPPC13P1-201ENST00000435991 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
TRAPPC13P1-201ENST00000435991 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC13P1-201ENST00000435991 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC13P1-201ENST00000435991 FOXK1P85037 733 aa12.95□□□□□ -0.34
TRAPPC13P1-201ENST00000435991 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC13P1-201ENST00000435991 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
TRAPPC13P1-201ENST00000435991 NUDT7P0C024 238 aa12.92□□□□□ -0.34
TRAPPC13P1-201ENST00000435991 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 DSG2Q14126 1118 aa12.87□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
TRAPPC13P1-201ENST00000435991 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
TRAPPC13P1-201ENST00000435991 PBX2P40425 430 aa12.8□□□□□ -0.36
TRAPPC13P1-201ENST00000435991 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC13P1-201ENST00000435991 TBC1D12O60347 775 aa12.78□□□□□ -0.36
TRAPPC13P1-201ENST00000435991 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 PDE4AP27815 886 aa12.76□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 PTGER2P43116 358 aa12.75□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 LSM11P83369 360 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
TRAPPC13P1-201ENST00000435991 MFSD10Q14728 455 aa12.68□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
TRAPPC13P1-201ENST00000435991 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC13P1-201ENST00000435991 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
TRAPPC13P1-201ENST00000435991 TK2O00142 265 aa12.58□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 ADGRD1Q6QNK2 874 aa12.58□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 PSEN2P49810 448 aa12.56□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 EVI5O60447 810 aa12.55□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 FOSBP53539 338 aa12.54□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
TRAPPC13P1-201ENST00000435991 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 HRO43593 1189 aa12.51□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC13P1-201ENST00000435991 PTPREP23469 700 aa12.45□□□□□ -0.42
TRAPPC13P1-201ENST00000435991 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
TRAPPC13P1-201ENST00000435991 SLC4A5Q9BY07 1137 aa12.45□□□□□ -0.42
TRAPPC13P1-201ENST00000435991 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
TRAPPC13P1-201ENST00000435991 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
TRAPPC13P1-201ENST00000435991 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 PCDHGA10Q9Y5H3 936 aa12.39□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 DPYSL4O14531 572 aa12.37□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 PHF14O94880 888 aa12.37□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC13P1-201ENST00000435991 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
TRAPPC13P1-201ENST00000435991 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
TRAPPC13P1-201ENST00000435991 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
TRAPPC13P1-201ENST00000435991 EPAS1Q99814 870 aa12.31□□□□□ -0.44
TRAPPC13P1-201ENST00000435991 PDIA6Q15084 440 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms