RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
CDCA4P4-201ENST00000435216 SIGLEC1Q9BZZ2 1709 aa21.41■■□□□ 1.02
CDCA4P4-201ENST00000435216 ZFYVE16Q7Z3T8 1539 aa21.41■■□□□ 1.02
CDCA4P4-201ENST00000435216 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
CDCA4P4-201ENST00000435216 CLIP1P30622 1438 aa21.38■■□□□ 1.01
CDCA4P4-201ENST00000435216 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
CDCA4P4-201ENST00000435216 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
CDCA4P4-201ENST00000435216 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
CDCA4P4-201ENST00000435216 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
CDCA4P4-201ENST00000435216 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
CDCA4P4-201ENST00000435216 CCDC18Q5T9S5 1454 aa21.33■■□□□ 1.01
CDCA4P4-201ENST00000435216 MLECQ14165 292 aa21.33■■□□□ 1.01
CDCA4P4-201ENST00000435216 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1.01
CDCA4P4-201ENST00000435216 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
CDCA4P4-201ENST00000435216 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
CDCA4P4-201ENST00000435216 ILDR1Q86SU0 546 aaPredicted RBP21.29■■□□□ 1
CDCA4P4-201ENST00000435216 AFAP1Q8N556 730 aa21.29■■□□□ 1
CDCA4P4-201ENST00000435216 PREX2Q70Z35 1606 aa21.28■■□□□ 1
CDCA4P4-201ENST00000435216 ATP10AO60312 1499 aa21.27■■□□□ 1
CDCA4P4-201ENST00000435216 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
CDCA4P4-201ENST00000435216 FER1L4A9Z1Z3 1794 aa21.25■□□□□ 0.99
CDCA4P4-201ENST00000435216 KDM5CP41229 1560 aa21.25■□□□□ 0.99
CDCA4P4-201ENST00000435216 C9orf84Q5VXU9 1444 aa21.25■□□□□ 0.99
CDCA4P4-201ENST00000435216 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
CDCA4P4-201ENST00000435216 CDC42BPAQ5VT25 1732 aa21.24■□□□□ 0.99
CDCA4P4-201ENST00000435216 LMTK3Q96Q04 1460 aa21.24■□□□□ 0.99
CDCA4P4-201ENST00000435216 ABCC1P33527 1531 aa21.22■□□□□ 0.99
CDCA4P4-201ENST00000435216 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
CDCA4P4-201ENST00000435216 ITSN2Q9NZM3 1697 aa21.21■□□□□ 0.99
CDCA4P4-201ENST00000435216 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
CDCA4P4-201ENST00000435216 DIP2CQ9Y2E4 1556 aa21.2■□□□□ 0.98
CDCA4P4-201ENST00000435216 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CDCA4P4-201ENST00000435216 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
CDCA4P4-201ENST00000435216 HSPA2P54652 639 aa21.17■□□□□ 0.98
CDCA4P4-201ENST00000435216 MLH3Q9UHC1 1453 aa21.15■□□□□ 0.98
CDCA4P4-201ENST00000435216 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.98
CDCA4P4-201ENST00000435216 GPATCH8Q9UKJ3 1502 aaKnown RBP21.14■□□□□ 0.98
CDCA4P4-201ENST00000435216 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
CDCA4P4-201ENST00000435216 KIDINS220Q9ULH0 1771 aa21.12■□□□□ 0.97
CDCA4P4-201ENST00000435216 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
CDCA4P4-201ENST00000435216 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
CDCA4P4-201ENST00000435216 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
CDCA4P4-201ENST00000435216 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
CDCA4P4-201ENST00000435216 HNRNPMP52272 730 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDCA4P4-201ENST00000435216 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
CDCA4P4-201ENST00000435216 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
CDCA4P4-201ENST00000435216 PREX1Q8TCU6 1659 aa21.05■□□□□ 0.96
CDCA4P4-201ENST00000435216 AGLP35573 1532 aa21.04■□□□□ 0.96
CDCA4P4-201ENST00000435216 EHBP1L1Q8N3D4 1523 aa21.03■□□□□ 0.96
CDCA4P4-201ENST00000435216 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
CDCA4P4-201ENST00000435216 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
CDCA4P4-201ENST00000435216 C3P01024 1663 aa21.02■□□□□ 0.95
CDCA4P4-201ENST00000435216 ZNF644Q9H582 1327 aaPredicted RBP21.01■□□□□ 0.95
CDCA4P4-201ENST00000435216 ATP7AQ04656 1500 aa21■□□□□ 0.95
CDCA4P4-201ENST00000435216 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
CDCA4P4-201ENST00000435216 SUPT6HQ7KZ85 1726 aaKnown RBP20.99■□□□□ 0.95
CDCA4P4-201ENST00000435216 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
CDCA4P4-201ENST00000435216 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
CDCA4P4-201ENST00000435216 PLEKHH2Q8IVE3 1493 aa20.99■□□□□ 0.95
CDCA4P4-201ENST00000435216 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
CDCA4P4-201ENST00000435216 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
CDCA4P4-201ENST00000435216 UHRF1BP1Q6BDS2 1440 aa20.95■□□□□ 0.94
CDCA4P4-201ENST00000435216 A2MP01023 1474 aa20.92■□□□□ 0.94
CDCA4P4-201ENST00000435216 NCOA2Q15596 1464 aa20.92■□□□□ 0.94
CDCA4P4-201ENST00000435216 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
CDCA4P4-201ENST00000435216 MBD5Q9P267 1494 aa20.91■□□□□ 0.94
CDCA4P4-201ENST00000435216 SETD1BQ9UPS6 1966 aaKnown RBP20.91■□□□□ 0.94
CDCA4P4-201ENST00000435216 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
CDCA4P4-201ENST00000435216 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
CDCA4P4-201ENST00000435216 CLTCQ00610 1675 aaKnown RBP20.89■□□□□ 0.93
CDCA4P4-201ENST00000435216 ADGBQ8N7X0 1667 aa20.88■□□□□ 0.93
CDCA4P4-201ENST00000435216 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
CDCA4P4-201ENST00000435216 GGT6Q6P531 493 aa20.87■□□□□ 0.93
CDCA4P4-201ENST00000435216 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
CDCA4P4-201ENST00000435216 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
CDCA4P4-201ENST00000435216 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
CDCA4P4-201ENST00000435216 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
CDCA4P4-201ENST00000435216 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
CDCA4P4-201ENST00000435216 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
CDCA4P4-201ENST00000435216 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
CDCA4P4-201ENST00000435216 NPATQ14207 1427 aa20.79■□□□□ 0.92
CDCA4P4-201ENST00000435216 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
CDCA4P4-201ENST00000435216 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
CDCA4P4-201ENST00000435216 DHX29Q7Z478 1369 aaKnown RBP20.77■□□□□ 0.92
CDCA4P4-201ENST00000435216 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
CDCA4P4-201ENST00000435216 CAMSAP1Q5T5Y3 1602 aa20.75■□□□□ 0.91
CDCA4P4-201ENST00000435216 MYO3AQ8NEV4 1616 aa20.75■□□□□ 0.91
CDCA4P4-201ENST00000435216 KIF3BO15066 747 aa20.74■□□□□ 0.91
CDCA4P4-201ENST00000435216 ARHGEF5Q12774 1597 aa20.74■□□□□ 0.91
CDCA4P4-201ENST00000435216 NCOA1Q15788 1441 aa20.74■□□□□ 0.91
CDCA4P4-201ENST00000435216 PTPRTO14522 1441 aa20.72■□□□□ 0.91
CDCA4P4-201ENST00000435216 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
CDCA4P4-201ENST00000435216 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.91
CDCA4P4-201ENST00000435216 MAP3K1Q13233 1512 aa20.7■□□□□ 0.9
CDCA4P4-201ENST00000435216 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
CDCA4P4-201ENST00000435216 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
CDCA4P4-201ENST00000435216 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
CDCA4P4-201ENST00000435216 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
CDCA4P4-201ENST00000435216 NCKAP5LQ9HCH0 1330 aa20.69■□□□□ 0.9
CDCA4P4-201ENST00000435216 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms