RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 HSPA5P11021 654 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-203ENST00000432907 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-203ENST00000432907 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
PKNOX1-203ENST00000432907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
PKNOX1-203ENST00000432907 MS4A1P11836 297 aa13.21□□□□□ -0.29
PKNOX1-203ENST00000432907 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.29
PKNOX1-203ENST00000432907 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
PKNOX1-203ENST00000432907 CUX2O14529 1486 aa13.2□□□□□ -0.3
PKNOX1-203ENST00000432907 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
PKNOX1-203ENST00000432907 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
PKNOX1-203ENST00000432907 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
PKNOX1-203ENST00000432907 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
PKNOX1-203ENST00000432907 FAM43AQ8N2R8 423 aa13.18□□□□□ -0.3
PKNOX1-203ENST00000432907 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
PKNOX1-203ENST00000432907 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
PKNOX1-203ENST00000432907 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
PKNOX1-203ENST00000432907 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 SYAP1Q96A49 352 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
PKNOX1-203ENST00000432907 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
PKNOX1-203ENST00000432907 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
PKNOX1-203ENST00000432907 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
PKNOX1-203ENST00000432907 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
PKNOX1-203ENST00000432907 SOGA1O94964 1423 aa13.14□□□□□ -0.31
PKNOX1-203ENST00000432907 PPP1R15AO75807 674 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-203ENST00000432907 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-203ENST00000432907 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
PKNOX1-203ENST00000432907 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-203ENST00000432907 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
PKNOX1-203ENST00000432907 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
PKNOX1-203ENST00000432907 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
PKNOX1-203ENST00000432907 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
PKNOX1-203ENST00000432907 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
PKNOX1-203ENST00000432907 MCCP23508 829 aa13.09□□□□□ -0.31
PKNOX1-203ENST00000432907 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
PKNOX1-203ENST00000432907 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
PKNOX1-203ENST00000432907 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 TPM2P07951 284 aa13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 MSH5O43196 834 aa13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 CSPP1Q1MSJ5 1256 aa13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-203ENST00000432907 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-203ENST00000432907 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-203ENST00000432907 RALBP1Q15311 655 aa13.06□□□□□ -0.32
PKNOX1-203ENST00000432907 MRE11P49959 708 aa13.05□□□□□ -0.32
PKNOX1-203ENST00000432907 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-203ENST00000432907 KCNJ4P48050 445 aa13.05□□□□□ -0.32
PKNOX1-203ENST00000432907 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
PKNOX1-203ENST00000432907 FGD1P98174 961 aa13.04□□□□□ -0.32
PKNOX1-203ENST00000432907 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
PKNOX1-203ENST00000432907 PHF14O94880 888 aa13.04□□□□□ -0.32
PKNOX1-203ENST00000432907 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
PKNOX1-203ENST00000432907 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
PKNOX1-203ENST00000432907 PLIN1O60240 522 aa13.03□□□□□ -0.32
PKNOX1-203ENST00000432907 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
PKNOX1-203ENST00000432907 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.32
PKNOX1-203ENST00000432907 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.32
PKNOX1-203ENST00000432907 TMF1P82094 1093 aa13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
PKNOX1-203ENST00000432907 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
PKNOX1-203ENST00000432907 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
PKNOX1-203ENST00000432907 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
PKNOX1-203ENST00000432907 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
PKNOX1-203ENST00000432907 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
PKNOX1-203ENST00000432907 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-203ENST00000432907 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
PKNOX1-203ENST00000432907 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-203ENST00000432907 CFTRP13569 1480 aa12.98□□□□□ -0.33
PKNOX1-203ENST00000432907 NAP1L2Q9ULW6 460 aaPredicted RBP12.98□□□□□ -0.33
PKNOX1-203ENST00000432907 IPO8O15397 1037 aaKnown RBP12.98□□□□□ -0.33
PKNOX1-203ENST00000432907 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
PKNOX1-203ENST00000432907 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
PKNOX1-203ENST00000432907 APBB1O00213 710 aa12.97□□□□□ -0.33
PKNOX1-203ENST00000432907 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-203ENST00000432907 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-203ENST00000432907 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
PKNOX1-203ENST00000432907 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.33
PKNOX1-203ENST00000432907 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
PKNOX1-203ENST00000432907 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.33
PKNOX1-203ENST00000432907 APPP05067 770 aa12.96□□□□□ -0.34
PKNOX1-203ENST00000432907 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
PKNOX1-203ENST00000432907 ST18O60284 1047 aa12.95□□□□□ -0.34
PKNOX1-203ENST00000432907 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-203ENST00000432907 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms