RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
SEC13-212ENST00000432213 POGZQ7Z3K3 1410 aa23.66■■□□□ 1.38
SEC13-212ENST00000432213 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
SEC13-212ENST00000432213 FER1L4A9Z1Z3 1794 aa23.65■■□□□ 1.38
SEC13-212ENST00000432213 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
SEC13-212ENST00000432213 SCAPERQ9BY12 1400 aa23.63■■□□□ 1.37
SEC13-212ENST00000432213 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
SEC13-212ENST00000432213 TROQ12816 1431 aaPredicted RBP23.58■■□□□ 1.36
SEC13-212ENST00000432213 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
SEC13-212ENST00000432213 KDM5CP41229 1560 aa23.55■■□□□ 1.36
SEC13-212ENST00000432213 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
SEC13-212ENST00000432213 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
SEC13-212ENST00000432213 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
SEC13-212ENST00000432213 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
SEC13-212ENST00000432213 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
SEC13-212ENST00000432213 ABCA6Q8N139 1617 aa23.51■■□□□ 1.35
SEC13-212ENST00000432213 MLECQ14165 292 aa23.51■■□□□ 1.35
SEC13-212ENST00000432213 DIP2CQ9Y2E4 1556 aa23.51■■□□□ 1.35
SEC13-212ENST00000432213 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
SEC13-212ENST00000432213 ATP10AO60312 1499 aa23.49■■□□□ 1.35
SEC13-212ENST00000432213 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
SEC13-212ENST00000432213 HSPA2P54652 639 aa23.48■■□□□ 1.35
SEC13-212ENST00000432213 CASKIN1Q8WXD9 1431 aa23.48■■□□□ 1.35
SEC13-212ENST00000432213 ABCC1P33527 1531 aa23.48■■□□□ 1.35
SEC13-212ENST00000432213 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
SEC13-212ENST00000432213 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
SEC13-212ENST00000432213 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
SEC13-212ENST00000432213 CLIP1P30622 1438 aa23.44■■□□□ 1.34
SEC13-212ENST00000432213 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
SEC13-212ENST00000432213 KIDINS220Q9ULH0 1771 aa23.42■■□□□ 1.34
SEC13-212ENST00000432213 CCDC18Q5T9S5 1454 aa23.42■■□□□ 1.34
SEC13-212ENST00000432213 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
SEC13-212ENST00000432213 CDK11AQ9UQ88 783 aaPredicted RBP23.41■■□□□ 1.34
SEC13-212ENST00000432213 FYCO1Q9BQS8 1478 aa23.39■■□□□ 1.34
SEC13-212ENST00000432213 SAMD9LQ8IVG5 1584 aa23.39■■□□□ 1.33
SEC13-212ENST00000432213 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
SEC13-212ENST00000432213 C3P01024 1663 aa23.38■■□□□ 1.33
SEC13-212ENST00000432213 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
SEC13-212ENST00000432213 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
SEC13-212ENST00000432213 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
SEC13-212ENST00000432213 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
SEC13-212ENST00000432213 SYCP2Q9BX26 1530 aa23.32■■□□□ 1.32
SEC13-212ENST00000432213 AGLP35573 1532 aa23.28■■□□□ 1.32
SEC13-212ENST00000432213 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
SEC13-212ENST00000432213 SUPT6HQ7KZ85 1726 aaKnown RBP23.26■■□□□ 1.31
SEC13-212ENST00000432213 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
SEC13-212ENST00000432213 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
SEC13-212ENST00000432213 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
SEC13-212ENST00000432213 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
SEC13-212ENST00000432213 ZNF777Q9ULD5 760 aaPredicted RBP23.2■■□□□ 1.3
SEC13-212ENST00000432213 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
SEC13-212ENST00000432213 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
SEC13-212ENST00000432213 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
SEC13-212ENST00000432213 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
SEC13-212ENST00000432213 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
SEC13-212ENST00000432213 UHRF1BP1Q6BDS2 1440 aa23.16■■□□□ 1.3
SEC13-212ENST00000432213 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
SEC13-212ENST00000432213 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
SEC13-212ENST00000432213 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
SEC13-212ENST00000432213 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
SEC13-212ENST00000432213 CCNB3Q8WWL7 1395 aa23.1■■□□□ 1.29
SEC13-212ENST00000432213 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
SEC13-212ENST00000432213 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
SEC13-212ENST00000432213 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.29
SEC13-212ENST00000432213 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
SEC13-212ENST00000432213 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
SEC13-212ENST00000432213 A2MP01023 1474 aa23.06■■□□□ 1.28
SEC13-212ENST00000432213 MBD5Q9P267 1494 aa23.06■■□□□ 1.28
SEC13-212ENST00000432213 CFDP1Q9UEE9 299 aaPredicted RBP23.06■■□□□ 1.28
SEC13-212ENST00000432213 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
SEC13-212ENST00000432213 ZNF142P52746 1687 aaPredicted RBP23.04■■□□□ 1.28
SEC13-212ENST00000432213 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
SEC13-212ENST00000432213 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
SEC13-212ENST00000432213 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
SEC13-212ENST00000432213 LTBP4Q8N2S1 1624 aa23.01■■□□□ 1.27
SEC13-212ENST00000432213 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
SEC13-212ENST00000432213 NPATQ14207 1427 aa22.99■■□□□ 1.27
SEC13-212ENST00000432213 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
SEC13-212ENST00000432213 PTPRTO14522 1441 aa22.98■■□□□ 1.27
SEC13-212ENST00000432213 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
SEC13-212ENST00000432213 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
SEC13-212ENST00000432213 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
SEC13-212ENST00000432213 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
SEC13-212ENST00000432213 GGT6Q6P531 493 aa22.92■■□□□ 1.26
SEC13-212ENST00000432213 CCDC141Q6ZP82 1450 aa22.9■■□□□ 1.26
SEC13-212ENST00000432213 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.25
SEC13-212ENST00000432213 RTEL1-TNFRSF6BF6WH68 1400 aa22.89■■□□□ 1.25
SEC13-212ENST00000432213 NCKAP5LQ9HCH0 1330 aa22.88■■□□□ 1.25
SEC13-212ENST00000432213 DNMT1P26358 1616 aaKnown RBP22.87■■□□□ 1.25
SEC13-212ENST00000432213 ARHGEF5Q12774 1597 aa22.86■■□□□ 1.25
SEC13-212ENST00000432213 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
SEC13-212ENST00000432213 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
SEC13-212ENST00000432213 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
SEC13-212ENST00000432213 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.25
SEC13-212ENST00000432213 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
SEC13-212ENST00000432213 LRRC9Q6ZRR7 1453 aa22.83■■□□□ 1.25
SEC13-212ENST00000432213 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
SEC13-212ENST00000432213 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
SEC13-212ENST00000432213 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
SEC13-212ENST00000432213 ZNF335Q9H4Z2 1342 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms