RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 PLCH2O75038 1416 aa20.59■□□□□ 0.89
RTN1-204ENST00000432103 CAMSAP2Q08AD1 1489 aa20.59■□□□□ 0.89
RTN1-204ENST00000432103 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
RTN1-204ENST00000432103 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
RTN1-204ENST00000432103 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.88
RTN1-204ENST00000432103 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
RTN1-204ENST00000432103 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
RTN1-204ENST00000432103 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
RTN1-204ENST00000432103 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
RTN1-204ENST00000432103 CDC42BPBQ9Y5S2 1711 aa20.54■□□□□ 0.88
RTN1-204ENST00000432103 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
RTN1-204ENST00000432103 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
RTN1-204ENST00000432103 DAPK1P53355 1430 aa20.52■□□□□ 0.88
RTN1-204ENST00000432103 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
RTN1-204ENST00000432103 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
RTN1-204ENST00000432103 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
RTN1-204ENST00000432103 ABCC5O15440 1437 aa20.49■□□□□ 0.87
RTN1-204ENST00000432103 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
RTN1-204ENST00000432103 ROCK1Q13464 1354 aa20.48■□□□□ 0.87
RTN1-204ENST00000432103 SAMD9LQ8IVG5 1584 aa20.48■□□□□ 0.87
RTN1-204ENST00000432103 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
RTN1-204ENST00000432103 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
RTN1-204ENST00000432103 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
RTN1-204ENST00000432103 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
RTN1-204ENST00000432103 PTPRKQ15262 1439 aa20.46■□□□□ 0.87
RTN1-204ENST00000432103 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
RTN1-204ENST00000432103 GLI2P10070 1586 aa20.46■□□□□ 0.87
RTN1-204ENST00000432103 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
RTN1-204ENST00000432103 FANCAO15360 1455 aa20.45■□□□□ 0.86
RTN1-204ENST00000432103 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
RTN1-204ENST00000432103 CCDC141Q6ZP82 1450 aa20.44■□□□□ 0.86
RTN1-204ENST00000432103 MBD5Q9P267 1494 aa20.43■□□□□ 0.86
RTN1-204ENST00000432103 CROCC2H7BZ55 1655 aa20.42■□□□□ 0.86
RTN1-204ENST00000432103 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
RTN1-204ENST00000432103 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
RTN1-204ENST00000432103 CCER1Q8TC90 406 aaPredicted RBP20.41■□□□□ 0.86
RTN1-204ENST00000432103 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
RTN1-204ENST00000432103 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
RTN1-204ENST00000432103 SYCP2Q9BX26 1530 aa20.41■□□□□ 0.86
RTN1-204ENST00000432103 ABCC1P33527 1531 aa20.4■□□□□ 0.86
RTN1-204ENST00000432103 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
RTN1-204ENST00000432103 NAIPQ13075 1403 aa20.39■□□□□ 0.85
RTN1-204ENST00000432103 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.85
RTN1-204ENST00000432103 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
RTN1-204ENST00000432103 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
RTN1-204ENST00000432103 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
RTN1-204ENST00000432103 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
RTN1-204ENST00000432103 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
RTN1-204ENST00000432103 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
RTN1-204ENST00000432103 NEO1Q92859 1461 aa20.36■□□□□ 0.85
RTN1-204ENST00000432103 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
RTN1-204ENST00000432103 ADGRL1O94910 1474 aa20.36■□□□□ 0.85
RTN1-204ENST00000432103 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
RTN1-204ENST00000432103 MAST1Q9Y2H9 1570 aa20.35■□□□□ 0.85
RTN1-204ENST00000432103 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
RTN1-204ENST00000432103 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
RTN1-204ENST00000432103 TEX14Q8IWB6 1497 aa20.31■□□□□ 0.84
RTN1-204ENST00000432103 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
RTN1-204ENST00000432103 RTEL1-TNFRSF6BF6WH68 1400 aa20.29■□□□□ 0.84
RTN1-204ENST00000432103 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
RTN1-204ENST00000432103 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
RTN1-204ENST00000432103 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
RTN1-204ENST00000432103 PLXNC1O60486 1568 aa20.26■□□□□ 0.83
RTN1-204ENST00000432103 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
RTN1-204ENST00000432103 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
RTN1-204ENST00000432103 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
RTN1-204ENST00000432103 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
RTN1-204ENST00000432103 DENND4BO75064 1496 aaPredicted RBP20.23■□□□□ 0.83
RTN1-204ENST00000432103 POGZQ7Z3K3 1410 aa20.22■□□□□ 0.83
RTN1-204ENST00000432103 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
RTN1-204ENST00000432103 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
RTN1-204ENST00000432103 ZFYVE16Q7Z3T8 1539 aa20.2■□□□□ 0.82
RTN1-204ENST00000432103 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
RTN1-204ENST00000432103 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
RTN1-204ENST00000432103 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
RTN1-204ENST00000432103 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
RTN1-204ENST00000432103 KDM5CP41229 1560 aa20.18■□□□□ 0.82
RTN1-204ENST00000432103 ERBINQ96RT1 1412 aa20.17■□□□□ 0.82
RTN1-204ENST00000432103 MLH3Q9UHC1 1453 aa20.16■□□□□ 0.82
RTN1-204ENST00000432103 KDM6BO15054 1643 aa20.15■□□□□ 0.82
RTN1-204ENST00000432103 PPRC1Q5VV67 1664 aaKnown RBP20.15■□□□□ 0.82
RTN1-204ENST00000432103 TSPOAP1O95153 1857 aa20.14■□□□□ 0.81
RTN1-204ENST00000432103 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
RTN1-204ENST00000432103 RICTORQ6R327 1708 aa20.09■□□□□ 0.81
RTN1-204ENST00000432103 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
RTN1-204ENST00000432103 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
RTN1-204ENST00000432103 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
RTN1-204ENST00000432103 KIDINS220Q9ULH0 1771 aa20.08■□□□□ 0.81
RTN1-204ENST00000432103 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
RTN1-204ENST00000432103 TRHP20396 242 aaPredicted RBP20.08■□□□□ 0.8
RTN1-204ENST00000432103 KDM5DQ9BY66 1539 aa20.08■□□□□ 0.8
RTN1-204ENST00000432103 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
RTN1-204ENST00000432103 NUP155O75694 1391 aa20.07■□□□□ 0.8
RTN1-204ENST00000432103 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
RTN1-204ENST00000432103 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
RTN1-204ENST00000432103 A2MP01023 1474 aa20.05■□□□□ 0.8
RTN1-204ENST00000432103 UNC13BO14795 1591 aa20.05■□□□□ 0.8
RTN1-204ENST00000432103 FRMPD1Q5SYB0 1578 aa20.02■□□□□ 0.79
RTN1-204ENST00000432103 PZPP20742 1482 aa20.01■□□□□ 0.79
RTN1-204ENST00000432103 KANK1Q14678 1352 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms