RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MICALL2Q8IY33 904 aa6.88□□□□□ -1.31
HMGB1P27-201ENST00000431429 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
HMGB1P27-201ENST00000431429 KIF3CO14782 793 aa6.87□□□□□ -1.31
HMGB1P27-201ENST00000431429 FOXK1P85037 733 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 DSG2Q14126 1118 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 EMILIN3Q9NT22 766 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 HAX1O00165 279 aa6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 TULP1O00294 542 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 ZMYND10O75800 440 aa6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 PDIA6Q15084 440 aa6.83□□□□□ -1.32
HMGB1P27-201ENST00000431429 OCEL1Q9H607 264 aa6.83□□□□□ -1.32
HMGB1P27-201ENST00000431429 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
HMGB1P27-201ENST00000431429 MLLT3P42568 568 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 BOLA1Q9Y3E2 137 aa6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 SPDYE16A6NNV3 312 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P27-201ENST00000431429 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P27-201ENST00000431429 C2orf72A6NCS6 295 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 GABBR2O75899 941 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 TMEM92Q6UXU6 159 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 BARGINQ6ZT62 677 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 DPYSL4O14531 572 aa6.78□□□□□ -1.32
HMGB1P27-201ENST00000431429 PELP1Q8IZL8 1130 aaKnown RBP6.78□□□□□ -1.32
HMGB1P27-201ENST00000431429 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 GPR37O15354 613 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 PLPP6Q8IY26 295 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 TMC2Q8TDI7 906 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 RBM26Q5T8P6 1007 aaKnown RBP6.76□□□□□ -1.33
HMGB1P27-201ENST00000431429 COLQQ9Y215 455 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P27-201ENST00000431429 PLCG2P16885 1265 aa6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 OXER1Q8TDS5 423 aa6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 PTGER2P43116 358 aa6.73□□□□□ -1.33
HMGB1P27-201ENST00000431429 GTF3C3Q9Y5Q9 886 aa6.73□□□□□ -1.33
HMGB1P27-201ENST00000431429 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
HMGB1P27-201ENST00000431429 POTEIP0CG38 1075 aa6.71□□□□□ -1.34
HMGB1P27-201ENST00000431429 SLC39A7Q92504 469 aa6.71□□□□□ -1.34
HMGB1P27-201ENST00000431429 C7P10643 843 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 OSBPP22059 807 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 AK7Q96M32 723 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 SLC34A2O95436 690 aa6.68□□□□□ -1.34
HMGB1P27-201ENST00000431429 PTCD2Q8WV60 388 aaKnown RBP6.68□□□□□ -1.34
HMGB1P27-201ENST00000431429 G3V3G9 751 aa6.67□□□□□ -1.34
HMGB1P27-201ENST00000431429 NEUROD2Q15784 382 aa6.67□□□□□ -1.34
HMGB1P27-201ENST00000431429 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 POTEHQ6S545 545 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 DCBLD2Q96PD2 775 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 ANO8Q9HCE9 1232 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 METRNQ9UJH8 293 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 TRIM66O15016 1216 aa6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 SEC24BO95487 1268 aa6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 UPF1Q92900 1129 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P27-201ENST00000431429 MINK1Q8N4C8 1332 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 KDM4FA0A1W2PPD8 638 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 EVI5O60447 810 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 MAP2K5Q13163 448 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 PDE4DQ08499 809 aa6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 ERICH6Q7L0X2 663 aa6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 GNPATO15228 680 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 TBC1D12O60347 775 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 HIC1Q14526 733 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 AMHR2Q16671 573 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 IRF6O14896 467 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 PTGDRQ13258 359 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 C3orf67Q6ZVT6 689 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 SP7Q8TDD2 431 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 DDX12PQ92771 950 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 CCDC102AQ96A19 550 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 FCHSD2O94868 740 aa6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 FECHP22830 423 aa6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 NPDC1Q9NQX5 325 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 PHF14O94880 888 aa6.57□□□□□ -1.36
HMGB1P27-201ENST00000431429 EN1Q05925 392 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P27-201ENST00000431429 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 EPAS1Q99814 870 aa6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 DAXXQ9UER7 740 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 POTEJP0CG39 1038 aa6.55□□□□□ -1.36
HMGB1P27-201ENST00000431429 PCDHGA4Q9Y5G9 962 aa6.55□□□□□ -1.36
HMGB1P27-201ENST00000431429 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 PCDHGA10Q9Y5H3 936 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 PLEKHG3A1L390 1219 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 JPH4Q96JJ6 628 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 CDHR5Q9HBB8 845 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 ZNF316A6NFI3 1004 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P27-201ENST00000431429 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
HMGB1P27-201ENST00000431429 HOXB3P14651 431 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 FOSBP53539 338 aa6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 SLAIN1Q8ND83 568 aa6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 TYW1BQ6NUM6 668 aa6.5□□□□□ -1.37
HMGB1P27-201ENST00000431429 TTC13Q8NBP0 860 aa6.5□□□□□ -1.37
HMGB1P27-201ENST00000431429 IL27Q8NEV9 243 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms