RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 AMOTL1Q8IY63 956 aa5.86□□□□□ -1.47
LRRK2-204ENST00000430804 RTL5Q5HYW3 569 aaPredicted RBP5.85□□□□□ -1.47
LRRK2-204ENST00000430804 THEMISQ8N1K5 641 aaPredicted RBP5.85□□□□□ -1.47
LRRK2-204ENST00000430804 STK26Q9P289 416 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
LRRK2-204ENST00000430804 NBPF8Q3BBV2 869 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 NBPF14Q5TI25 921 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 BEGAINQ9BUH8 593 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 NEUROD2Q15784 382 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 CEP164Q9UPV0 1460 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 SMARCA2P51531 1590 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 FGD1P98174 961 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 DDRGK1Q96HY6 314 aa5.85□□□□□ -1.47
LRRK2-204ENST00000430804 AMPHP49418 695 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 GORABQ5T7V8 394 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 SYTL4Q96C24 671 aaPredicted RBP5.84□□□□□ -1.47
LRRK2-204ENST00000430804 JPH4Q96JJ6 628 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 TCEAL9Q9UHQ7 104 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 SOGA1O94964 1423 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 CEP162Q5TB80 1403 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 ABCC8Q09428 1581 aa5.84□□□□□ -1.47
LRRK2-204ENST00000430804 DIEXFQ68CQ4 756 aaKnown RBP5.84□□□□□ -1.48
LRRK2-204ENST00000430804 PTPRGP23470 1445 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 CALD1Q05682 793 aaKnown RBP5.83□□□□□ -1.48
LRRK2-204ENST00000430804 ANKLE2Q86XL3 938 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 RBM33Q96EV2 1170 aaKnown RBP5.83□□□□□ -1.48
LRRK2-204ENST00000430804 C1orf141Q5JVX7 400 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 RRP7BPQ9NSQ0 103 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 UBAP1LF5GYI3 381 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 TERF2IPQ9NYB0 399 aa5.83□□□□□ -1.48
LRRK2-204ENST00000430804 LAS1LQ9Y4W2 734 aaKnown RBP5.82□□□□□ -1.48
LRRK2-204ENST00000430804 MS4A1P11836 297 aa5.82□□□□□ -1.48
LRRK2-204ENST00000430804 TTC5Q8N0Z6 440 aa5.82□□□□□ -1.48
LRRK2-204ENST00000430804 HNRNPMP52272 730 aaKnown RBP eCLIP5.81□□□□□ -1.48
LRRK2-204ENST00000430804 KCNJ4P48050 445 aa5.81□□□□□ -1.48
LRRK2-204ENST00000430804 NGLY1Q96IV0 654 aa5.81□□□□□ -1.48
LRRK2-204ENST00000430804 SMC4Q9NTJ3 1288 aa5.81□□□□□ -1.48
LRRK2-204ENST00000430804 U2SURPO15042 1029 aaKnown RBP5.81□□□□□ -1.48
LRRK2-204ENST00000430804 NCLP19338 710 aaKnown RBP5.81□□□□□ -1.48
LRRK2-204ENST00000430804 SAFB2Q14151 953 aaKnown RBP eCLIP5.8□□□□□ -1.48
LRRK2-204ENST00000430804 FBXW7Q969H0 707 aa5.8□□□□□ -1.48
LRRK2-204ENST00000430804 WWC1Q8IX03 1113 aa5.8□□□□□ -1.48
LRRK2-204ENST00000430804 GPRASP1Q5JY77 1395 aa5.8□□□□□ -1.48
LRRK2-204ENST00000430804 GOLGA3Q08378 1498 aa5.8□□□□□ -1.48
LRRK2-204ENST00000430804 VGFO15240 615 aaPredicted RBP5.79□□□□□ -1.48
LRRK2-204ENST00000430804 POLD1P28340 1107 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 FHAD1B1AJZ9 1412 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 EEA1Q15075 1411 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 CADPSQ9ULU8 1353 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 CARMIL1Q5VZK9 1371 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 WWC2Q6AWC2 1192 aa5.79□□□□□ -1.48
LRRK2-204ENST00000430804 EIF3AQ14152 1382 aaKnown RBP5.79□□□□□ -1.48
LRRK2-204ENST00000430804 TMF1P82094 1093 aa5.78□□□□□ -1.48
LRRK2-204ENST00000430804 CUX2O14529 1486 aa5.78□□□□□ -1.48
LRRK2-204ENST00000430804 CHMP3Q9Y3E7 222 aa5.78□□□□□ -1.48
LRRK2-204ENST00000430804 RAPGEF4Q8WZA2 1011 aa5.78□□□□□ -1.48
LRRK2-204ENST00000430804 CARD11Q9BXL7 1154 aa5.78□□□□□ -1.48
LRRK2-204ENST00000430804 VPS53Q5VIR6 699 aa5.77□□□□□ -1.49
LRRK2-204ENST00000430804 STK31Q9BXU1 1019 aa5.77□□□□□ -1.49
LRRK2-204ENST00000430804 TDRD9Q8NDG6 1382 aaKnown RBP5.77□□□□□ -1.49
LRRK2-204ENST00000430804 FTSJ3Q8IY81 847 aaKnown RBP5.77□□□□□ -1.49
LRRK2-204ENST00000430804 MARCH6O60337 910 aa5.77□□□□□ -1.49
LRRK2-204ENST00000430804 BAZ1AQ9NRL2 1556 aaPredicted RBP5.77□□□□□ -1.49
LRRK2-204ENST00000430804 VPS37DQ86XT2 251 aa5.77□□□□□ -1.49
LRRK2-204ENST00000430804 NAP1L2Q9ULW6 460 aaPredicted RBP5.77□□□□□ -1.49
LRRK2-204ENST00000430804 MORC1Q86VD1 984 aa5.76□□□□□ -1.49
LRRK2-204ENST00000430804 LOC105371045A0A1W2PR82 267 aa5.76□□□□□ -1.49
LRRK2-204ENST00000430804 ZCCHC6Q5VYS8 1495 aaKnown RBP5.76□□□□□ -1.49
LRRK2-204ENST00000430804 UACAQ9BZF9 1416 aa5.76□□□□□ -1.49
LRRK2-204ENST00000430804 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
LRRK2-204ENST00000430804 TMEM87AQ8NBN3 555 aa5.76□□□□□ -1.49
LRRK2-204ENST00000430804 LMOD3Q0VAK6 560 aa5.75□□□□□ -1.49
LRRK2-204ENST00000430804 LTV1Q96GA3 475 aaPredicted RBP5.75□□□□□ -1.49
LRRK2-204ENST00000430804 GNL2Q13823 731 aaKnown RBP5.75□□□□□ -1.49
LRRK2-204ENST00000430804 ANKRD30AQ9BXX3 1397 aa5.75□□□□□ -1.49
LRRK2-204ENST00000430804 LRRFIP1Q32MZ4 808 aaKnown RBP5.75□□□□□ -1.49
LRRK2-204ENST00000430804 L1TD1Q5T7N2 865 aaKnown RBP5.75□□□□□ -1.49
LRRK2-204ENST00000430804 CCDC34Q96HJ3 373 aa5.75□□□□□ -1.49
LRRK2-204ENST00000430804 GPATCH3Q96I76 525 aa5.75□□□□□ -1.49
LRRK2-204ENST00000430804 CHAF1AQ13111 956 aaPredicted RBP5.74□□□□□ -1.49
LRRK2-204ENST00000430804 TXNDC2Q86VQ3 553 aa5.74□□□□□ -1.49
LRRK2-204ENST00000430804 TEFQ10587 303 aa5.74□□□□□ -1.49
LRRK2-204ENST00000430804 BCL11BQ9C0K0 894 aaPredicted RBP5.74□□□□□ -1.49
LRRK2-204ENST00000430804 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
LRRK2-204ENST00000430804 NLRP2Q9NX02 1062 aa5.73□□□□□ -1.49
LRRK2-204ENST00000430804 NUTM2FA1L443 756 aa5.73□□□□□ -1.49
LRRK2-204ENST00000430804 PPP6R1Q9UPN7 881 aa5.73□□□□□ -1.49
LRRK2-204ENST00000430804 NEXNQ0ZGT2 675 aa5.73□□□□□ -1.49
LRRK2-204ENST00000430804 COG3Q96JB2 828 aa5.73□□□□□ -1.49
LRRK2-204ENST00000430804 SPDYE4A6NLX3 237 aa5.72□□□□□ -1.49
LRRK2-204ENST00000430804 TNNT2P45379 298 aaPredicted RBP5.72□□□□□ -1.49
LRRK2-204ENST00000430804 TTLL12Q14166 644 aaPredicted RBP5.72□□□□□ -1.49
LRRK2-204ENST00000430804 CCDC43Q96MW1 224 aaKnown RBP5.72□□□□□ -1.49
LRRK2-204ENST00000430804 STRN4Q9NRL3 753 aa5.72□□□□□ -1.49
LRRK2-204ENST00000430804 KIAA2012Q0VF49 1180 aa5.72□□□□□ -1.49
LRRK2-204ENST00000430804 TMOD2Q9NZR1 351 aa5.72□□□□□ -1.49
LRRK2-204ENST00000430804 RAD21O60216 631 aa5.71□□□□□ -1.49
LRRK2-204ENST00000430804 ESCO1Q5FWF5 840 aa5.71□□□□□ -1.49
LRRK2-204ENST00000430804 SETD5Q9C0A6 1442 aa5.71□□□□□ -1.5
LRRK2-204ENST00000430804 TAOK2Q9UL54 1235 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms