RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 ZFYVE16Q7Z3T8 1539 aa26.73■■□□□ 1.87
PTPRA-206ENST00000430705 PTPRMP28827 1452 aa26.72■■□□□ 1.87
PTPRA-206ENST00000430705 SCAPERQ9BY12 1400 aa26.7■■□□□ 1.86
PTPRA-206ENST00000430705 CCDC18Q5T9S5 1454 aa26.69■■□□□ 1.86
PTPRA-206ENST00000430705 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
PTPRA-206ENST00000430705 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
PTPRA-206ENST00000430705 MAGI2Q86UL8 1455 aa26.67■■□□□ 1.86
PTPRA-206ENST00000430705 CLIP1P30622 1438 aa26.66■■□□□ 1.86
PTPRA-206ENST00000430705 CDK11AQ9UQ88 783 aaPredicted RBP26.66■■□□□ 1.86
PTPRA-206ENST00000430705 PREX2Q70Z35 1606 aa26.65■■□□□ 1.86
PTPRA-206ENST00000430705 ARHGAP5Q13017 1502 aa26.65■■□□□ 1.86
PTPRA-206ENST00000430705 RIMS1Q86UR5 1692 aaKnown RBP26.64■■□□□ 1.86
PTPRA-206ENST00000430705 KDM5CP41229 1560 aa26.63■■□□□ 1.85
PTPRA-206ENST00000430705 ARID4BQ4LE39 1312 aaPredicted RBP26.6■■□□□ 1.85
PTPRA-206ENST00000430705 EFCAB2Q5VUJ9 269 aa26.59■■□□□ 1.85
PTPRA-206ENST00000430705 CDC42BPAQ5VT25 1732 aa26.59■■□□□ 1.85
PTPRA-206ENST00000430705 ABCC1P33527 1531 aa26.57■■□□□ 1.84
PTPRA-206ENST00000430705 ZNF518AQ6AHZ1 1483 aa26.56■■□□□ 1.84
PTPRA-206ENST00000430705 ARHGEF12Q9NZN5 1544 aa26.55■■□□□ 1.84
PTPRA-206ENST00000430705 ITSN2Q9NZM3 1697 aa26.55■■□□□ 1.84
PTPRA-206ENST00000430705 FER1L4A9Z1Z3 1794 aa26.52■■□□□ 1.84
PTPRA-206ENST00000430705 ATP10AO60312 1499 aa26.52■■□□□ 1.84
PTPRA-206ENST00000430705 C9orf84Q5VXU9 1444 aa26.52■■□□□ 1.84
PTPRA-206ENST00000430705 DIP2CQ9Y2E4 1556 aa26.52■■□□□ 1.84
PTPRA-206ENST00000430705 ABCA6Q8N139 1617 aa26.51■■□□□ 1.83
PTPRA-206ENST00000430705 LMTK3Q96Q04 1460 aa26.49■■□□□ 1.83
PTPRA-206ENST00000430705 AFAP1Q8N556 730 aa26.48■■□□□ 1.83
PTPRA-206ENST00000430705 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
PTPRA-206ENST00000430705 SAMD9LQ8IVG5 1584 aa26.46■■□□□ 1.83
PTPRA-206ENST00000430705 REREQ9P2R6 1566 aa26.46■■□□□ 1.83
PTPRA-206ENST00000430705 MLH3Q9UHC1 1453 aa26.44■■□□□ 1.82
PTPRA-206ENST00000430705 GPATCH8Q9UKJ3 1502 aaKnown RBP26.43■■□□□ 1.82
PTPRA-206ENST00000430705 CEP162Q5TB80 1403 aa26.42■■□□□ 1.82
PTPRA-206ENST00000430705 KIDINS220Q9ULH0 1771 aa26.42■■□□□ 1.82
PTPRA-206ENST00000430705 MLECQ14165 292 aa26.41■■□□□ 1.82
PTPRA-206ENST00000430705 SYCP2Q9BX26 1530 aa26.39■■□□□ 1.82
PTPRA-206ENST00000430705 TIAM1Q13009 1591 aa26.34■■□□□ 1.81
PTPRA-206ENST00000430705 ILDR1Q86SU0 546 aaPredicted RBP26.34■■□□□ 1.81
PTPRA-206ENST00000430705 EHBP1L1Q8N3D4 1523 aa26.34■■□□□ 1.81
PTPRA-206ENST00000430705 AGLP35573 1532 aa26.33■■□□□ 1.81
PTPRA-206ENST00000430705 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
PTPRA-206ENST00000430705 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
PTPRA-206ENST00000430705 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
PTPRA-206ENST00000430705 PREX1Q8TCU6 1659 aa26.27■■□□□ 1.8
PTPRA-206ENST00000430705 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
PTPRA-206ENST00000430705 ZNF777Q9ULD5 760 aaPredicted RBP26.26■■□□□ 1.79
PTPRA-206ENST00000430705 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
PTPRA-206ENST00000430705 C3P01024 1663 aa26.25■■□□□ 1.79
PTPRA-206ENST00000430705 ATP7AQ04656 1500 aa26.24■■□□□ 1.79
PTPRA-206ENST00000430705 HSPA2P54652 639 aa26.24■■□□□ 1.79
PTPRA-206ENST00000430705 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
PTPRA-206ENST00000430705 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
PTPRA-206ENST00000430705 PLEKHH2Q8IVE3 1493 aa26.23■■□□□ 1.79
PTPRA-206ENST00000430705 CEBPAP49715 358 aaPredicted RBP26.22■■□□□ 1.79
PTPRA-206ENST00000430705 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.794e-7■■■■■ 28.7
PTPRA-206ENST00000430705 CFDP1Q9UEE9 299 aaPredicted RBP26.2■■□□□ 1.78
PTPRA-206ENST00000430705 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
PTPRA-206ENST00000430705 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
PTPRA-206ENST00000430705 SPAG9O60271 1321 aaKnown RBP26.16■■□□□ 1.78
PTPRA-206ENST00000430705 ZNF644Q9H582 1327 aaPredicted RBP26.16■■□□□ 1.78
PTPRA-206ENST00000430705 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
PTPRA-206ENST00000430705 NCOA2Q15596 1464 aa26.16■■□□□ 1.78
PTPRA-206ENST00000430705 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
PTPRA-206ENST00000430705 MROH2AA6NES4 1674 aa26.12■■□□□ 1.77
PTPRA-206ENST00000430705 ADGBQ8N7X0 1667 aa26.11■■□□□ 1.77
PTPRA-206ENST00000430705 A2MP01023 1474 aa26.11■■□□□ 1.77
PTPRA-206ENST00000430705 STRCQ7RTU9 1775 aa26.1■■□□□ 1.77
PTPRA-206ENST00000430705 CAMSAP2Q08AD1 1489 aa26.08■■□□□ 1.77
PTPRA-206ENST00000430705 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
PTPRA-206ENST00000430705 CNTLNQ9NXG0 1405 aa26.07■■□□□ 1.76
PTPRA-206ENST00000430705 CLTCQ00610 1675 aaKnown RBP26.06■■□□□ 1.76
PTPRA-206ENST00000430705 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
PTPRA-206ENST00000430705 SETD1BQ9UPS6 1966 aaKnown RBP26.03■■□□□ 1.76
PTPRA-206ENST00000430705 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
PTPRA-206ENST00000430705 RTEL1-TNFRSF6BF6WH68 1400 aa26.01■■□□□ 1.75
PTPRA-206ENST00000430705 ARHGEF5Q12774 1597 aa25.99■■□□□ 1.75
PTPRA-206ENST00000430705 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
PTPRA-206ENST00000430705 FBXO41Q8TF61 875 aa25.98■■□□□ 1.75
PTPRA-206ENST00000430705 NPATQ14207 1427 aa25.97■■□□□ 1.75
PTPRA-206ENST00000430705 ESF1Q9H501 851 aaKnown RBP25.96■■□□□ 1.75
PTPRA-206ENST00000430705 ZMYM3Q14202 1370 aa25.95■■□□□ 1.75
PTPRA-206ENST00000430705 MYO3AQ8NEV4 1616 aa25.95■■□□□ 1.74
PTPRA-206ENST00000430705 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
PTPRA-206ENST00000430705 ZNF142P52746 1687 aaPredicted RBP25.93■■□□□ 1.74
PTPRA-206ENST00000430705 DHX29Q7Z478 1369 aaKnown RBP25.92■■□□□ 1.74
PTPRA-206ENST00000430705 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
PTPRA-206ENST00000430705 NCOA1Q15788 1441 aa25.89■■□□□ 1.74
PTPRA-206ENST00000430705 MAST1Q9Y2H9 1570 aa25.88■■□□□ 1.73
PTPRA-206ENST00000430705 GGT6Q6P531 493 aa25.88■■□□□ 1.73
PTPRA-206ENST00000430705 CAMSAP1Q5T5Y3 1602 aa25.86■■□□□ 1.73
PTPRA-206ENST00000430705 MYOM3Q5VTT5 1437 aa25.86■■□□□ 1.73
PTPRA-206ENST00000430705 CEP170BQ9Y4F5 1589 aaPredicted RBP25.85■■□□□ 1.73
PTPRA-206ENST00000430705 PTPRTO14522 1441 aa25.84■■□□□ 1.73
PTPRA-206ENST00000430705 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.72
PTPRA-206ENST00000430705 CERKQ8TCT0 537 aa25.82■■□□□ 1.72
PTPRA-206ENST00000430705 FAM135AQ9P2D6 1515 aa25.82■■□□□ 1.72
PTPRA-206ENST00000430705 MIA2Q96PC5 1412 aa25.81■■□□□ 1.72
PTPRA-206ENST00000430705 RSPH4AQ5TD94 716 aa25.81■■□□□ 1.72
PTPRA-206ENST00000430705 RNF17Q9BXT8 1623 aaKnown RBP25.81■■□□□ 1.72
PTPRA-206ENST00000430705 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms