RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZFYVE16Q7Z3T8 1539 aa19.46■□□□□ 0.71
HDAC4-202ENST00000430200 PLCH2O75038 1416 aa19.45■□□□□ 0.7
HDAC4-202ENST00000430200 POGZQ7Z3K3 1410 aa19.45■□□□□ 0.7
HDAC4-202ENST00000430200 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
HDAC4-202ENST00000430200 FYCO1Q9BQS8 1478 aa19.45■□□□□ 0.7
HDAC4-202ENST00000430200 ITSN2Q9NZM3 1697 aa19.43■□□□□ 0.7
HDAC4-202ENST00000430200 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
HDAC4-202ENST00000430200 KDM5CP41229 1560 aa19.41■□□□□ 0.7
HDAC4-202ENST00000430200 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-202ENST00000430200 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
HDAC4-202ENST00000430200 CLIP1P30622 1438 aa19.41■□□□□ 0.7
HDAC4-202ENST00000430200 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
HDAC4-202ENST00000430200 PTPRMP28827 1452 aa19.4■□□□□ 0.7
HDAC4-202ENST00000430200 ABCC1P33527 1531 aa19.39■□□□□ 0.69
HDAC4-202ENST00000430200 ABCA6Q8N139 1617 aa19.39■□□□□ 0.69
HDAC4-202ENST00000430200 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
HDAC4-202ENST00000430200 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
HDAC4-202ENST00000430200 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
HDAC4-202ENST00000430200 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
HDAC4-202ENST00000430200 MAGI2Q86UL8 1455 aa19.34■□□□□ 0.69
HDAC4-202ENST00000430200 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
HDAC4-202ENST00000430200 ZNF518AQ6AHZ1 1483 aa19.3■□□□□ 0.68
HDAC4-202ENST00000430200 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
HDAC4-202ENST00000430200 LMTK3Q96Q04 1460 aa19.27■□□□□ 0.67
HDAC4-202ENST00000430200 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
HDAC4-202ENST00000430200 REREQ9P2R6 1566 aa19.27■□□□□ 0.67
HDAC4-202ENST00000430200 TRAPPC8Q9Y2L5 1435 aa19.26■□□□□ 0.67
HDAC4-202ENST00000430200 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
HDAC4-202ENST00000430200 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-202ENST00000430200 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
HDAC4-202ENST00000430200 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
HDAC4-202ENST00000430200 ATP10AO60312 1499 aa19.24■□□□□ 0.67
HDAC4-202ENST00000430200 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
HDAC4-202ENST00000430200 GPATCH8Q9UKJ3 1502 aaKnown RBP19.23■□□□□ 0.67
HDAC4-202ENST00000430200 INO80Q9ULG1 1556 aaPredicted RBP19.22■□□□□ 0.67
HDAC4-202ENST00000430200 EHBP1L1Q8N3D4 1523 aa19.21■□□□□ 0.67
HDAC4-202ENST00000430200 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
HDAC4-202ENST00000430200 AFAP1Q8N556 730 aa19.2■□□□□ 0.66
HDAC4-202ENST00000430200 C3P01024 1663 aa19.19■□□□□ 0.66
HDAC4-202ENST00000430200 PREX1Q8TCU6 1659 aa19.17■□□□□ 0.66
HDAC4-202ENST00000430200 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
HDAC4-202ENST00000430200 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
HDAC4-202ENST00000430200 MLECQ14165 292 aa19.14■□□□□ 0.65
HDAC4-202ENST00000430200 AGLP35573 1532 aa19.14■□□□□ 0.65
HDAC4-202ENST00000430200 ATP7AQ04656 1500 aa19.14■□□□□ 0.65
HDAC4-202ENST00000430200 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
HDAC4-202ENST00000430200 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
HDAC4-202ENST00000430200 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
HDAC4-202ENST00000430200 MROH2AA6NES4 1674 aa19.08■□□□□ 0.64
HDAC4-202ENST00000430200 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
HDAC4-202ENST00000430200 CLTCQ00610 1675 aaKnown RBP19.06■□□□□ 0.64
HDAC4-202ENST00000430200 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
HDAC4-202ENST00000430200 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
HDAC4-202ENST00000430200 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
HDAC4-202ENST00000430200 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-202ENST00000430200 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
HDAC4-202ENST00000430200 KIAA1107Q9UPP5 1409 aa19.05■□□□□ 0.64
HDAC4-202ENST00000430200 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
HDAC4-202ENST00000430200 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
HDAC4-202ENST00000430200 HSPA2P54652 639 aa19.03■□□□□ 0.64
HDAC4-202ENST00000430200 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
HDAC4-202ENST00000430200 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-202ENST00000430200 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDAC4-202ENST00000430200 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-202ENST00000430200 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-202ENST00000430200 LRRC9Q6ZRR7 1453 aa18.98■□□□□ 0.63
HDAC4-202ENST00000430200 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-202ENST00000430200 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
HDAC4-202ENST00000430200 A2MP01023 1474 aa18.97■□□□□ 0.63
HDAC4-202ENST00000430200 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
HDAC4-202ENST00000430200 SPAG9O60271 1321 aaKnown RBP18.97■□□□□ 0.63
HDAC4-202ENST00000430200 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
HDAC4-202ENST00000430200 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
HDAC4-202ENST00000430200 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-202ENST00000430200 CCDC141Q6ZP82 1450 aa18.94■□□□□ 0.62
HDAC4-202ENST00000430200 CROCC2H7BZ55 1655 aa18.92■□□□□ 0.62
HDAC4-202ENST00000430200 MAP3K1Q13233 1512 aa18.92■□□□□ 0.62
HDAC4-202ENST00000430200 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
HDAC4-202ENST00000430200 CNTLNQ9NXG0 1405 aa18.89■□□□□ 0.61
HDAC4-202ENST00000430200 MAST1Q9Y2H9 1570 aa18.89■□□□□ 0.61
HDAC4-202ENST00000430200 RTEL1-TNFRSF6BF6WH68 1400 aa18.87■□□□□ 0.61
HDAC4-202ENST00000430200 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
HDAC4-202ENST00000430200 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
HDAC4-202ENST00000430200 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
HDAC4-202ENST00000430200 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-202ENST00000430200 NPATQ14207 1427 aa18.83■□□□□ 0.61
HDAC4-202ENST00000430200 PTPRKQ15262 1439 aa18.83■□□□□ 0.6
HDAC4-202ENST00000430200 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
HDAC4-202ENST00000430200 CEP152O94986 1710 aa18.82■□□□□ 0.6
HDAC4-202ENST00000430200 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
HDAC4-202ENST00000430200 KDM5DQ9BY66 1539 aa18.81■□□□□ 0.6
HDAC4-202ENST00000430200 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
HDAC4-202ENST00000430200 EIF2AK4Q9P2K8 1649 aaKnown RBP18.81■□□□□ 0.6
HDAC4-202ENST00000430200 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
HDAC4-202ENST00000430200 NCOA1Q15788 1441 aa18.8■□□□□ 0.6
HDAC4-202ENST00000430200 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
HDAC4-202ENST00000430200 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-202ENST00000430200 ZC3H13Q5T200 1668 aaKnown RBP18.78■□□□□ 0.6
HDAC4-202ENST00000430200 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
HDAC4-202ENST00000430200 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms