RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 POGZQ7Z3K3 1410 aa14.94□□□□□ -0.02
NEDD1-203ENST00000429527 BCORL1Q5H9F3 1711 aa14.94□□□□□ -0.02
NEDD1-203ENST00000429527 DENND4BO75064 1496 aaPredicted RBP14.94□□□□□ -0.02
NEDD1-203ENST00000429527 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
NEDD1-203ENST00000429527 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
NEDD1-203ENST00000429527 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
NEDD1-203ENST00000429527 ZFYVE16Q7Z3T8 1539 aa14.9□□□□□ -0.02
NEDD1-203ENST00000429527 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
NEDD1-203ENST00000429527 HECW2Q9P2P5 1572 aa14.89□□□□□ -0.03
NEDD1-203ENST00000429527 SAMD9LQ8IVG5 1584 aa14.88□□□□□ -0.03
NEDD1-203ENST00000429527 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
NEDD1-203ENST00000429527 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
NEDD1-203ENST00000429527 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
NEDD1-203ENST00000429527 SIGLEC1Q9BZZ2 1709 aa14.87□□□□□ -0.03
NEDD1-203ENST00000429527 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
NEDD1-203ENST00000429527 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
NEDD1-203ENST00000429527 PLEKHH2Q8IVE3 1493 aa14.87□□□□□ -0.03
NEDD1-203ENST00000429527 AGLP35573 1532 aa14.87□□□□□ -0.03
NEDD1-203ENST00000429527 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
NEDD1-203ENST00000429527 GPATCH8Q9UKJ3 1502 aaKnown RBP14.86□□□□□ -0.03
NEDD1-203ENST00000429527 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
NEDD1-203ENST00000429527 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
NEDD1-203ENST00000429527 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
NEDD1-203ENST00000429527 ARHGAP5Q13017 1502 aa14.84□□□□□ -0.03
NEDD1-203ENST00000429527 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
NEDD1-203ENST00000429527 ABCA6Q8N139 1617 aa14.82□□□□□ -0.04
NEDD1-203ENST00000429527 ARHGEF5Q12774 1597 aa14.82□□□□□ -0.04
NEDD1-203ENST00000429527 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
NEDD1-203ENST00000429527 PLXNC1O60486 1568 aa14.82□□□□□ -0.04
NEDD1-203ENST00000429527 KDM4FA0A1W2PPD8 638 aa14.81□□□□□ -0.04
NEDD1-203ENST00000429527 FAM135AQ9P2D6 1515 aa14.81□□□□□ -0.04
NEDD1-203ENST00000429527 MAST1Q9Y2H9 1570 aa14.8□□□□□ -0.04
NEDD1-203ENST00000429527 ADGBQ8N7X0 1667 aa14.8□□□□□ -0.04
NEDD1-203ENST00000429527 C9orf84Q5VXU9 1444 aa14.79□□□□□ -0.04
NEDD1-203ENST00000429527 ATP10AO60312 1499 aa14.79□□□□□ -0.04
NEDD1-203ENST00000429527 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
NEDD1-203ENST00000429527 EFCAB2Q5VUJ9 269 aa14.79□□□□□ -0.04
NEDD1-203ENST00000429527 MROH2AA6NES4 1674 aa14.79□□□□□ -0.04
NEDD1-203ENST00000429527 LRRC9Q6ZRR7 1453 aa14.78□□□□□ -0.04
NEDD1-203ENST00000429527 MADDQ8WXG6 1647 aa14.75□□□□□ -0.05
NEDD1-203ENST00000429527 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
NEDD1-203ENST00000429527 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
NEDD1-203ENST00000429527 MBD5Q9P267 1494 aa14.75□□□□□ -0.05
NEDD1-203ENST00000429527 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
NEDD1-203ENST00000429527 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
NEDD1-203ENST00000429527 CROCC2H7BZ55 1655 aa14.73□□□□□ -0.05
NEDD1-203ENST00000429527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
NEDD1-203ENST00000429527 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
NEDD1-203ENST00000429527 YEATS2Q9ULM3 1422 aa14.72□□□□□ -0.05
NEDD1-203ENST00000429527 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
NEDD1-203ENST00000429527 MIA2Q96PC5 1412 aa14.72□□□□□ -0.05
NEDD1-203ENST00000429527 ARID3CA6NKF2 412 aa14.71□□□□□ -0.05
NEDD1-203ENST00000429527 TRAPPC8Q9Y2L5 1435 aa14.71□□□□□ -0.06
NEDD1-203ENST00000429527 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
NEDD1-203ENST00000429527 RIMS1Q86UR5 1692 aaKnown RBP14.69□□□□□ -0.06
NEDD1-203ENST00000429527 EIF2AK4Q9P2K8 1649 aaKnown RBP14.69□□□□□ -0.06
NEDD1-203ENST00000429527 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
NEDD1-203ENST00000429527 PTPRMP28827 1452 aa14.69□□□□□ -0.06
NEDD1-203ENST00000429527 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
NEDD1-203ENST00000429527 RAPGEF3O95398 923 aa14.68□□□□□ -0.06
NEDD1-203ENST00000429527 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
NEDD1-203ENST00000429527 CAMSAP2Q08AD1 1489 aa14.67□□□□□ -0.06
NEDD1-203ENST00000429527 SHANK2Q9UPX8 1470 aa14.67□□□□□ -0.06
NEDD1-203ENST00000429527 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
NEDD1-203ENST00000429527 CCDC141Q6ZP82 1450 aa14.65□□□□□ -0.06
NEDD1-203ENST00000429527 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
NEDD1-203ENST00000429527 RSPH4AQ5TD94 716 aa14.63□□□□□ -0.07
NEDD1-203ENST00000429527 MYOM3Q5VTT5 1437 aa14.63□□□□□ -0.07
NEDD1-203ENST00000429527 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
NEDD1-203ENST00000429527 C3P01024 1663 aa14.62□□□□□ -0.07
NEDD1-203ENST00000429527 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
NEDD1-203ENST00000429527 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
NEDD1-203ENST00000429527 ZNF142P52746 1687 aaPredicted RBP14.61□□□□□ -0.07
NEDD1-203ENST00000429527 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
NEDD1-203ENST00000429527 PELP1Q8IZL8 1130 aaKnown RBP14.6□□□□□ -0.07
NEDD1-203ENST00000429527 KDM5DQ9BY66 1539 aa14.6□□□□□ -0.07
NEDD1-203ENST00000429527 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
NEDD1-203ENST00000429527 A2MP01023 1474 aa14.59□□□□□ -0.07
NEDD1-203ENST00000429527 DEPDC5O75140 1603 aa14.59□□□□□ -0.07
NEDD1-203ENST00000429527 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
NEDD1-203ENST00000429527 NPATQ14207 1427 aa14.56□□□□□ -0.08
NEDD1-203ENST00000429527 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
NEDD1-203ENST00000429527 LMTK3Q96Q04 1460 aa14.56□□□□□ -0.08
NEDD1-203ENST00000429527 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
NEDD1-203ENST00000429527 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
NEDD1-203ENST00000429527 ADGRL2O95490 1459 aa14.54□□□□□ -0.08
NEDD1-203ENST00000429527 MROH1Q8NDA8 1641 aa14.54□□□□□ -0.08
NEDD1-203ENST00000429527 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
NEDD1-203ENST00000429527 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
NEDD1-203ENST00000429527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.52□□□□□ -0.08
NEDD1-203ENST00000429527 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
NEDD1-203ENST00000429527 DUOX2Q9NRD8 1548 aa14.52□□□□□ -0.09
NEDD1-203ENST00000429527 SPAG9O60271 1321 aaKnown RBP14.51□□□□□ -0.09
NEDD1-203ENST00000429527 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
NEDD1-203ENST00000429527 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
NEDD1-203ENST00000429527 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
NEDD1-203ENST00000429527 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
NEDD1-203ENST00000429527 ERBINQ96RT1 1412 aa14.49□□□□□ -0.09
NEDD1-203ENST00000429527 LMTK2Q8IWU2 1503 aa14.48□□□□□ -0.09
NEDD1-203ENST00000429527 MYO3AQ8NEV4 1616 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms