RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
CCDC144A-208ENST00000428950 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
CCDC144A-208ENST00000428950 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
CCDC144A-208ENST00000428950 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
CCDC144A-208ENST00000428950 EMP3P54852 163 aa9.25□□□□□ -0.93
CCDC144A-208ENST00000428950 PPP1R37O75864 691 aa9.23□□□□□ -0.93
CCDC144A-208ENST00000428950 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
CCDC144A-208ENST00000428950 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
CCDC144A-208ENST00000428950 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
CCDC144A-208ENST00000428950 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
CCDC144A-208ENST00000428950 HS3ST6Q96QI5 342 aa9.21□□□□□ -0.94
CCDC144A-208ENST00000428950 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
CCDC144A-208ENST00000428950 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
CCDC144A-208ENST00000428950 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
CCDC144A-208ENST00000428950 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
CCDC144A-208ENST00000428950 KIF3CO14782 793 aa9.12□□□□□ -0.95
CCDC144A-208ENST00000428950 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
CCDC144A-208ENST00000428950 C2orf72A6NCS6 295 aa9.11□□□□□ -0.95
CCDC144A-208ENST00000428950 DOK7Q18PE1 504 aa9.1□□□□□ -0.95
CCDC144A-208ENST00000428950 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
CCDC144A-208ENST00000428950 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.07□□□□□ -0.96
CCDC144A-208ENST00000428950 ZNF710Q8N1W2 664 aa9.06□□□□□ -0.96
CCDC144A-208ENST00000428950 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
CCDC144A-208ENST00000428950 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
CCDC144A-208ENST00000428950 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
CCDC144A-208ENST00000428950 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
CCDC144A-208ENST00000428950 CRISPLD2Q9H0B8 497 aa9.02□□□□□ -0.97
CCDC144A-208ENST00000428950 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
CCDC144A-208ENST00000428950 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
CCDC144A-208ENST00000428950 FOXK1P85037 733 aa9.01□□□□□ -0.97
CCDC144A-208ENST00000428950 DSG2Q14126 1118 aa9□□□□□ -0.97
CCDC144A-208ENST00000428950 NCKAP5LQ9HCH0 1330 aa9□□□□□ -0.97
CCDC144A-208ENST00000428950 PLPP6Q8IY26 295 aa8.99□□□□□ -0.97
CCDC144A-208ENST00000428950 SLC34A2O95436 690 aa8.98□□□□□ -0.97
CCDC144A-208ENST00000428950 PDE4AP27815 886 aa8.98□□□□□ -0.97
CCDC144A-208ENST00000428950 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
CCDC144A-208ENST00000428950 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
CCDC144A-208ENST00000428950 CADPS2Q86UW7 1296 aa8.97□□□□□ -0.97
CCDC144A-208ENST00000428950 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
CCDC144A-208ENST00000428950 ARSIQ5FYB1 569 aa8.96□□□□□ -0.98
CCDC144A-208ENST00000428950 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
CCDC144A-208ENST00000428950 LARP6Q9BRS8 491 aaKnown RBP8.94□□□□□ -0.98
CCDC144A-208ENST00000428950 PCDHGA4Q9Y5G9 962 aa8.94□□□□□ -0.98
CCDC144A-208ENST00000428950 MFSD10Q14728 455 aa8.93□□□□□ -0.98
CCDC144A-208ENST00000428950 KHSRPQ92945 711 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC144A-208ENST00000428950 DDX27Q96GQ7 796 aaKnown RBP8.93□□□□□ -0.98
CCDC144A-208ENST00000428950 ERBB3P21860 1342 aa8.91□□□□□ -0.98
CCDC144A-208ENST00000428950 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
CCDC144A-208ENST00000428950 NUDT7P0C024 238 aa8.89□□□□□ -0.99
CCDC144A-208ENST00000428950 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
CCDC144A-208ENST00000428950 OXER1Q8TDS5 423 aa8.88□□□□□ -0.99
CCDC144A-208ENST00000428950 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
CCDC144A-208ENST00000428950 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC144A-208ENST00000428950 TBC1D12O60347 775 aa8.86□□□□□ -0.99
CCDC144A-208ENST00000428950 KDM4FA0A1W2PPD8 638 aa8.84□□□□□ -0.99
CCDC144A-208ENST00000428950 PTGER2P43116 358 aa8.84□□□□□ -0.99
CCDC144A-208ENST00000428950 LHX6Q9UPM6 363 aa8.83□□□□□ -1
CCDC144A-208ENST00000428950 CAMK2BQ13554 666 aa8.81□□□□□ -1
CCDC144A-208ENST00000428950 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
CCDC144A-208ENST00000428950 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
CCDC144A-208ENST00000428950 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
CCDC144A-208ENST00000428950 PSDA5PKW4 1024 aaPredicted RBP8.79□□□□□ -1
CCDC144A-208ENST00000428950 PLCB2Q00722 1185 aa8.79□□□□□ -1
CCDC144A-208ENST00000428950 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
CCDC144A-208ENST00000428950 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
CCDC144A-208ENST00000428950 EVI5O60447 810 aa8.76□□□□□ -1.01
CCDC144A-208ENST00000428950 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
CCDC144A-208ENST00000428950 DPYSL4O14531 572 aa8.74□□□□□ -1.01
CCDC144A-208ENST00000428950 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
CCDC144A-208ENST00000428950 PBX2P40425 430 aa8.73□□□□□ -1.01
CCDC144A-208ENST00000428950 E2F4Q16254 413 aa8.73□□□□□ -1.01
CCDC144A-208ENST00000428950 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
CCDC144A-208ENST00000428950 FOSBP53539 338 aa8.71□□□□□ -1.02
CCDC144A-208ENST00000428950 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
CCDC144A-208ENST00000428950 JPH4Q96JJ6 628 aa8.71□□□□□ -1.02
CCDC144A-208ENST00000428950 POTEEQ6S8J3 1075 aa8.7□□□□□ -1.02
CCDC144A-208ENST00000428950 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC144A-208ENST00000428950 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
CCDC144A-208ENST00000428950 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
CCDC144A-208ENST00000428950 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
CCDC144A-208ENST00000428950 PDIA6Q15084 440 aa8.67□□□□□ -1.02
CCDC144A-208ENST00000428950 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
CCDC144A-208ENST00000428950 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
CCDC144A-208ENST00000428950 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
CCDC144A-208ENST00000428950 PSEN2P49810 448 aa8.64□□□□□ -1.03
CCDC144A-208ENST00000428950 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
CCDC144A-208ENST00000428950 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
CCDC144A-208ENST00000428950 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
CCDC144A-208ENST00000428950 PHF14O94880 888 aa8.63□□□□□ -1.03
CCDC144A-208ENST00000428950 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
CCDC144A-208ENST00000428950 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
CCDC144A-208ENST00000428950 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
CCDC144A-208ENST00000428950 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
CCDC144A-208ENST00000428950 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
CCDC144A-208ENST00000428950 ADAM33Q9BZ11 813 aa8.62□□□□□ -1.03
CCDC144A-208ENST00000428950 PTPREP23469 700 aa8.61□□□□□ -1.03
CCDC144A-208ENST00000428950 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
CCDC144A-208ENST00000428950 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
CCDC144A-208ENST00000428950 DDX12PQ92771 950 aa8.6□□□□□ -1.03
CCDC144A-208ENST00000428950 EPAS1Q99814 870 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms