RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 DNMT1P26358 1616 aaKnown RBP19.15■□□□□ 0.66
HMGB3P4-201ENST00000428776 ITGAEP38570 1179 aa19.14■□□□□ 0.65
HMGB3P4-201ENST00000428776 ARAP3Q8WWN8 1544 aa19.14■□□□□ 0.65
HMGB3P4-201ENST00000428776 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
HMGB3P4-201ENST00000428776 PLCH2O75038 1416 aa19.12■□□□□ 0.65
HMGB3P4-201ENST00000428776 CROCC2H7BZ55 1655 aa19.11■□□□□ 0.65
HMGB3P4-201ENST00000428776 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
HMGB3P4-201ENST00000428776 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
HMGB3P4-201ENST00000428776 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
HMGB3P4-201ENST00000428776 DAPK1P53355 1430 aa19.08■□□□□ 0.64
HMGB3P4-201ENST00000428776 ARHGEF5Q12774 1597 aa19.07■□□□□ 0.64
HMGB3P4-201ENST00000428776 ADGBQ8N7X0 1667 aa19.07■□□□□ 0.64
HMGB3P4-201ENST00000428776 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
HMGB3P4-201ENST00000428776 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
HMGB3P4-201ENST00000428776 GLI2P10070 1586 aa19.06■□□□□ 0.64
HMGB3P4-201ENST00000428776 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
HMGB3P4-201ENST00000428776 ABCC5O15440 1437 aa19.04■□□□□ 0.64
HMGB3P4-201ENST00000428776 GCC2Q8IWJ2 1684 aa19.04■□□□□ 0.64
HMGB3P4-201ENST00000428776 CFAP74Q9C0B2 1584 aa19.03■□□□□ 0.64
HMGB3P4-201ENST00000428776 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
HMGB3P4-201ENST00000428776 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
HMGB3P4-201ENST00000428776 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
HMGB3P4-201ENST00000428776 AKNAQ7Z591 1439 aa19.01■□□□□ 0.63
HMGB3P4-201ENST00000428776 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
HMGB3P4-201ENST00000428776 MBD5Q9P267 1494 aa19.01■□□□□ 0.63
HMGB3P4-201ENST00000428776 DIP2BQ9P265 1576 aa19.01■□□□□ 0.63
HMGB3P4-201ENST00000428776 ABCC1P33527 1531 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 FANCAO15360 1455 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 SHANK2Q9UPX8 1470 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 HFM1A2PYH4 1435 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 CD109Q6YHK3 1445 aa19■□□□□ 0.63
HMGB3P4-201ENST00000428776 ROCK1Q13464 1354 aa18.99■□□□□ 0.63
HMGB3P4-201ENST00000428776 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
HMGB3P4-201ENST00000428776 KIF13AQ9H1H9 1805 aa18.98■□□□□ 0.63
HMGB3P4-201ENST00000428776 HRCP23327 699 aa18.97■□□□□ 0.63
HMGB3P4-201ENST00000428776 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGB3P4-201ENST00000428776 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
HMGB3P4-201ENST00000428776 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
HMGB3P4-201ENST00000428776 CHIC2Q9UKJ5 165 aa18.96■□□□□ 0.63
HMGB3P4-201ENST00000428776 MAST1Q9Y2H9 1570 aa18.96■□□□□ 0.63
HMGB3P4-201ENST00000428776 ADGRL2O95490 1459 aa18.96■□□□□ 0.63
HMGB3P4-201ENST00000428776 NAIPQ13075 1403 aa18.95■□□□□ 0.62
HMGB3P4-201ENST00000428776 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
HMGB3P4-201ENST00000428776 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
HMGB3P4-201ENST00000428776 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
HMGB3P4-201ENST00000428776 C9orf84Q5VXU9 1444 aa18.92■□□□□ 0.62
HMGB3P4-201ENST00000428776 NCOA1Q15788 1441 aa18.91■□□□□ 0.62
HMGB3P4-201ENST00000428776 NEO1Q92859 1461 aa18.91■□□□□ 0.62
HMGB3P4-201ENST00000428776 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
HMGB3P4-201ENST00000428776 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
HMGB3P4-201ENST00000428776 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
HMGB3P4-201ENST00000428776 ADGRL1O94910 1474 aa18.9■□□□□ 0.62
HMGB3P4-201ENST00000428776 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
HMGB3P4-201ENST00000428776 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
HMGB3P4-201ENST00000428776 PLXNC1O60486 1568 aa18.89■□□□□ 0.61
HMGB3P4-201ENST00000428776 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.61
HMGB3P4-201ENST00000428776 SCAPERQ9BY12 1400 aa18.87■□□□□ 0.61
HMGB3P4-201ENST00000428776 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
HMGB3P4-201ENST00000428776 KDM6BO15054 1643 aa18.86■□□□□ 0.61
HMGB3P4-201ENST00000428776 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
HMGB3P4-201ENST00000428776 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
HMGB3P4-201ENST00000428776 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.61
HMGB3P4-201ENST00000428776 INO80Q9ULG1 1556 aaPredicted RBP18.83■□□□□ 0.6
HMGB3P4-201ENST00000428776 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
HMGB3P4-201ENST00000428776 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
HMGB3P4-201ENST00000428776 RICTORQ6R327 1708 aa18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 ZFYVE16Q7Z3T8 1539 aa18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 ZEB1P37275 1124 aaPredicted RBP18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 KDM5CP41229 1560 aa18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 KIF15Q9NS87 1388 aa18.8■□□□□ 0.6
HMGB3P4-201ENST00000428776 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
HMGB3P4-201ENST00000428776 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
HMGB3P4-201ENST00000428776 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
HMGB3P4-201ENST00000428776 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
HMGB3P4-201ENST00000428776 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
HMGB3P4-201ENST00000428776 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
HMGB3P4-201ENST00000428776 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.6
HMGB3P4-201ENST00000428776 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
HMGB3P4-201ENST00000428776 HECW2Q9P2P5 1572 aa18.75■□□□□ 0.59
HMGB3P4-201ENST00000428776 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
HMGB3P4-201ENST00000428776 ERBINQ96RT1 1412 aa18.72■□□□□ 0.59
HMGB3P4-201ENST00000428776 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
HMGB3P4-201ENST00000428776 UNC13BO14795 1591 aa18.7■□□□□ 0.58
HMGB3P4-201ENST00000428776 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
HMGB3P4-201ENST00000428776 EIF2AK4Q9P2K8 1649 aaKnown RBP18.69■□□□□ 0.58
HMGB3P4-201ENST00000428776 MYT1LQ9UL68 1186 aa18.68■□□□□ 0.58
HMGB3P4-201ENST00000428776 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
HMGB3P4-201ENST00000428776 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
HMGB3P4-201ENST00000428776 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
HMGB3P4-201ENST00000428776 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
HMGB3P4-201ENST00000428776 DEPDC5O75140 1603 aa18.64■□□□□ 0.57
HMGB3P4-201ENST00000428776 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
HMGB3P4-201ENST00000428776 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
HMGB3P4-201ENST00000428776 PZPP20742 1482 aa18.64■□□□□ 0.57
HMGB3P4-201ENST00000428776 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
HMGB3P4-201ENST00000428776 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
HMGB3P4-201ENST00000428776 DIP2CQ9Y2E4 1556 aa18.63■□□□□ 0.57
HMGB3P4-201ENST00000428776 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms