RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
SEC13-210ENST00000428626 CDK11AQ9UQ88 783 aaPredicted RBP25.47■■□□□ 1.67
SEC13-210ENST00000428626 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
SEC13-210ENST00000428626 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
SEC13-210ENST00000428626 CASKIN1Q8WXD9 1431 aa25.44■■□□□ 1.66
SEC13-210ENST00000428626 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
SEC13-210ENST00000428626 MAGI2Q86UL8 1455 aa25.41■■□□□ 1.66
SEC13-210ENST00000428626 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.66
SEC13-210ENST00000428626 CLIP1P30622 1438 aa25.38■■□□□ 1.65
SEC13-210ENST00000428626 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
SEC13-210ENST00000428626 CDC42BPBQ9Y5S2 1711 aa25.37■■□□□ 1.65
SEC13-210ENST00000428626 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
SEC13-210ENST00000428626 ILDR1Q86SU0 546 aaPredicted RBP25.34■■□□□ 1.65
SEC13-210ENST00000428626 AFAP1Q8N556 730 aa25.33■■□□□ 1.65
SEC13-210ENST00000428626 FYCO1Q9BQS8 1478 aa25.33■■□□□ 1.65
SEC13-210ENST00000428626 KDM5CP41229 1560 aa25.31■■□□□ 1.64
SEC13-210ENST00000428626 ATP10AO60312 1499 aa25.31■■□□□ 1.64
SEC13-210ENST00000428626 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
SEC13-210ENST00000428626 ZNF518AQ6AHZ1 1483 aa25.3■■□□□ 1.64
SEC13-210ENST00000428626 MLECQ14165 292 aa25.3■■□□□ 1.64
SEC13-210ENST00000428626 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
SEC13-210ENST00000428626 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
SEC13-210ENST00000428626 C9orf84Q5VXU9 1444 aa25.28■■□□□ 1.64
SEC13-210ENST00000428626 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
SEC13-210ENST00000428626 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
SEC13-210ENST00000428626 ABCC1P33527 1531 aa25.25■■□□□ 1.63
SEC13-210ENST00000428626 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
SEC13-210ENST00000428626 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
SEC13-210ENST00000428626 DIP2CQ9Y2E4 1556 aa25.22■■□□□ 1.63
SEC13-210ENST00000428626 ITSN2Q9NZM3 1697 aa25.21■■□□□ 1.63
SEC13-210ENST00000428626 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
SEC13-210ENST00000428626 MLH3Q9UHC1 1453 aa25.19■■□□□ 1.62
SEC13-210ENST00000428626 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
SEC13-210ENST00000428626 HSPA2P54652 639 aa25.16■■□□□ 1.62
SEC13-210ENST00000428626 SAMD9LQ8IVG5 1584 aa25.15■■□□□ 1.62
SEC13-210ENST00000428626 REREQ9P2R6 1566 aa25.14■■□□□ 1.62
SEC13-210ENST00000428626 KIDINS220Q9ULH0 1771 aa25.14■■□□□ 1.62
SEC13-210ENST00000428626 MYT1LQ9UL68 1186 aa25.14■■□□□ 1.62
SEC13-210ENST00000428626 CEBPAP49715 358 aaPredicted RBP25.12■■□□□ 1.61
SEC13-210ENST00000428626 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
SEC13-210ENST00000428626 SYCP2Q9BX26 1530 aa25.1■■□□□ 1.61
SEC13-210ENST00000428626 CEP162Q5TB80 1403 aa25.1■■□□□ 1.61
SEC13-210ENST00000428626 AGLP35573 1532 aa25.07■■□□□ 1.6
SEC13-210ENST00000428626 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
SEC13-210ENST00000428626 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
SEC13-210ENST00000428626 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
SEC13-210ENST00000428626 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
SEC13-210ENST00000428626 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
SEC13-210ENST00000428626 KIAA1107Q9UPP5 1409 aa25.01■■□□□ 1.59
SEC13-210ENST00000428626 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
SEC13-210ENST00000428626 C3P01024 1663 aa24.99■■□□□ 1.59
SEC13-210ENST00000428626 EHBP1L1Q8N3D4 1523 aa24.99■■□□□ 1.59
SEC13-210ENST00000428626 ZNF644Q9H582 1327 aaPredicted RBP24.99■■□□□ 1.59
SEC13-210ENST00000428626 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
SEC13-210ENST00000428626 INO80Q9ULG1 1556 aaPredicted RBP24.97■■□□□ 1.59
SEC13-210ENST00000428626 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
SEC13-210ENST00000428626 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
SEC13-210ENST00000428626 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
SEC13-210ENST00000428626 FBXO41Q8TF61 875 aa24.94■■□□□ 1.58
SEC13-210ENST00000428626 SETD1BQ9UPS6 1966 aaKnown RBP24.94■■□□□ 1.58
SEC13-210ENST00000428626 SUPT6HQ7KZ85 1726 aaKnown RBP24.93■■□□□ 1.58
SEC13-210ENST00000428626 MBD5Q9P267 1494 aa24.92■■□□□ 1.58
SEC13-210ENST00000428626 PLXNC1O60486 1568 aa24.91■■□□□ 1.58
SEC13-210ENST00000428626 UHRF1BP1Q6BDS2 1440 aa24.9■■□□□ 1.58
SEC13-210ENST00000428626 STRCQ7RTU9 1775 aa24.89■■□□□ 1.57
SEC13-210ENST00000428626 A2MP01023 1474 aa24.88■■□□□ 1.57
SEC13-210ENST00000428626 NCOA2Q15596 1464 aa24.87■■□□□ 1.57
SEC13-210ENST00000428626 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
SEC13-210ENST00000428626 ESF1Q9H501 851 aaKnown RBP24.86■■□□□ 1.57
SEC13-210ENST00000428626 MROH2AA6NES4 1674 aa24.83■■□□□ 1.57
SEC13-210ENST00000428626 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
SEC13-210ENST00000428626 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
SEC13-210ENST00000428626 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
SEC13-210ENST00000428626 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
SEC13-210ENST00000428626 CAMSAP2Q08AD1 1489 aa24.79■■□□□ 1.56
SEC13-210ENST00000428626 RTEL1-TNFRSF6BF6WH68 1400 aa24.78■■□□□ 1.56
SEC13-210ENST00000428626 GGT6Q6P531 493 aa24.77■■□□□ 1.56
SEC13-210ENST00000428626 CERKQ8TCT0 537 aa24.77■■□□□ 1.56
SEC13-210ENST00000428626 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
SEC13-210ENST00000428626 NPATQ14207 1427 aa24.76■■□□□ 1.55
SEC13-210ENST00000428626 CCDC141Q6ZP82 1450 aa24.75■■□□□ 1.55
SEC13-210ENST00000428626 KANK4Q5T7N3 995 aaPredicted RBP24.74■■□□□ 1.55
SEC13-210ENST00000428626 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
SEC13-210ENST00000428626 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
SEC13-210ENST00000428626 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
SEC13-210ENST00000428626 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
SEC13-210ENST00000428626 PTPRTO14522 1441 aa24.69■■□□□ 1.54
SEC13-210ENST00000428626 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
SEC13-210ENST00000428626 CAMSAP1Q5T5Y3 1602 aa24.67■■□□□ 1.54
SEC13-210ENST00000428626 MYO3AQ8NEV4 1616 aa24.67■■□□□ 1.54
SEC13-210ENST00000428626 MAP3K1Q13233 1512 aa24.66■■□□□ 1.54
SEC13-210ENST00000428626 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
SEC13-210ENST00000428626 RSPH4AQ5TD94 716 aa24.65■■□□□ 1.54
SEC13-210ENST00000428626 KIF3BO15066 747 aa24.64■■□□□ 1.54
SEC13-210ENST00000428626 ZNF142P52746 1687 aaPredicted RBP24.64■■□□□ 1.53
SEC13-210ENST00000428626 CEP170BQ9Y4F5 1589 aaPredicted RBP24.62■■□□□ 1.53
SEC13-210ENST00000428626 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
SEC13-210ENST00000428626 NCKAP5LQ9HCH0 1330 aa24.6■■□□□ 1.53
SEC13-210ENST00000428626 FBXO31Q5XUX0 539 aaPredicted RBP24.58■■□□□ 1.53
SEC13-210ENST00000428626 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms