RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
GCFC2-203ENST00000427862 MFSD10Q14728 455 aa11.64□□□□□ -0.55
GCFC2-203ENST00000427862 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
GCFC2-203ENST00000427862 POTEMA6NI47 508 aa11.63□□□□□ -0.55
GCFC2-203ENST00000427862 SEC24BO95487 1268 aa11.63□□□□□ -0.55
GCFC2-203ENST00000427862 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
GCFC2-203ENST00000427862 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
GCFC2-203ENST00000427862 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
GCFC2-203ENST00000427862 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
GCFC2-203ENST00000427862 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
GCFC2-203ENST00000427862 E2F4Q16254 413 aa11.56□□□□□ -0.56
GCFC2-203ENST00000427862 TMEM92Q6UXU6 159 aa11.56□□□□□ -0.56
GCFC2-203ENST00000427862 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
GCFC2-203ENST00000427862 KIF3CO14782 793 aa11.55□□□□□ -0.56
GCFC2-203ENST00000427862 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
GCFC2-203ENST00000427862 DSG2Q14126 1118 aa11.53□□□□□ -0.56
GCFC2-203ENST00000427862 C2orf72A6NCS6 295 aa11.52□□□□□ -0.57
GCFC2-203ENST00000427862 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
GCFC2-203ENST00000427862 G3V3G9 751 aa11.51□□□□□ -0.57
GCFC2-203ENST00000427862 NBR1Q14596 966 aa11.51□□□□□ -0.57
GCFC2-203ENST00000427862 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
GCFC2-203ENST00000427862 FOXK1P85037 733 aa11.5□□□□□ -0.57
GCFC2-203ENST00000427862 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
GCFC2-203ENST00000427862 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
GCFC2-203ENST00000427862 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
GCFC2-203ENST00000427862 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
GCFC2-203ENST00000427862 PLPP6Q8IY26 295 aa11.45□□□□□ -0.58
GCFC2-203ENST00000427862 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
GCFC2-203ENST00000427862 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
GCFC2-203ENST00000427862 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
GCFC2-203ENST00000427862 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
GCFC2-203ENST00000427862 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
GCFC2-203ENST00000427862 SEMA3EO15041 775 aa11.38□□□□□ -0.59
GCFC2-203ENST00000427862 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
GCFC2-203ENST00000427862 DPYSL4O14531 572 aa11.35□□□□□ -0.59
GCFC2-203ENST00000427862 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
GCFC2-203ENST00000427862 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
GCFC2-203ENST00000427862 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
GCFC2-203ENST00000427862 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
GCFC2-203ENST00000427862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
GCFC2-203ENST00000427862 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
GCFC2-203ENST00000427862 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
GCFC2-203ENST00000427862 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
GCFC2-203ENST00000427862 PDIA6Q15084 440 aa11.28□□□□□ -0.6
GCFC2-203ENST00000427862 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
GCFC2-203ENST00000427862 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
GCFC2-203ENST00000427862 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
GCFC2-203ENST00000427862 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
GCFC2-203ENST00000427862 SLC34A2O95436 690 aa11.25□□□□□ -0.61
GCFC2-203ENST00000427862 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
GCFC2-203ENST00000427862 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
GCFC2-203ENST00000427862 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
GCFC2-203ENST00000427862 EVI5O60447 810 aa11.18□□□□□ -0.62
GCFC2-203ENST00000427862 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
GCFC2-203ENST00000427862 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
GCFC2-203ENST00000427862 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
GCFC2-203ENST00000427862 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
GCFC2-203ENST00000427862 TBC1D12O60347 775 aa11.16□□□□□ -0.62
GCFC2-203ENST00000427862 PTGER2P43116 358 aa11.16□□□□□ -0.62
GCFC2-203ENST00000427862 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
GCFC2-203ENST00000427862 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
GCFC2-203ENST00000427862 GRXCR2A6NFK2 248 aa11.13□□□□□ -0.63
GCFC2-203ENST00000427862 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
GCFC2-203ENST00000427862 OSBPP22059 807 aa11.12□□□□□ -0.63
GCFC2-203ENST00000427862 DDX12PQ92771 950 aa11.12□□□□□ -0.63
GCFC2-203ENST00000427862 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
GCFC2-203ENST00000427862 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.636e-6■■■□□ 16.5
GCFC2-203ENST00000427862 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
GCFC2-203ENST00000427862 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
GCFC2-203ENST00000427862 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
GCFC2-203ENST00000427862 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
GCFC2-203ENST00000427862 ZMYND10O75800 440 aa11.04□□□□□ -0.64
GCFC2-203ENST00000427862 NUDT7P0C024 238 aa11.04□□□□□ -0.64
GCFC2-203ENST00000427862 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
GCFC2-203ENST00000427862 GPR37O15354 613 aa11.03□□□□□ -0.64
GCFC2-203ENST00000427862 PCDHGA10Q9Y5H3 936 aa11.03□□□□□ -0.64
GCFC2-203ENST00000427862 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
GCFC2-203ENST00000427862 PHF14O94880 888 aa11.01□□□□□ -0.65
GCFC2-203ENST00000427862 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
GCFC2-203ENST00000427862 RIMBP2O15034 1052 aa11□□□□□ -0.65
GCFC2-203ENST00000427862 BARGINQ6ZT62 677 aa11□□□□□ -0.65
GCFC2-203ENST00000427862 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
GCFC2-203ENST00000427862 ST18O60284 1047 aa10.99□□□□□ -0.65
GCFC2-203ENST00000427862 FOSBP53539 338 aa10.99□□□□□ -0.65
GCFC2-203ENST00000427862 SNPHO15079 494 aa10.98□□□□□ -0.65
GCFC2-203ENST00000427862 EPAS1Q99814 870 aa10.98□□□□□ -0.65
GCFC2-203ENST00000427862 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
GCFC2-203ENST00000427862 HOXB1P14653 301 aaPredicted RBP10.97□□□□□ -0.65
GCFC2-203ENST00000427862 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
GCFC2-203ENST00000427862 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
GCFC2-203ENST00000427862 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
GCFC2-203ENST00000427862 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
GCFC2-203ENST00000427862 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
GCFC2-203ENST00000427862 RBM33Q96EV2 1170 aaKnown RBP10.95□□□□□ -0.66
GCFC2-203ENST00000427862 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
GCFC2-203ENST00000427862 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
GCFC2-203ENST00000427862 TSR1Q2NL82 804 aaKnown RBP10.93□□□□□ -0.66
GCFC2-203ENST00000427862 ZNF454Q8N9F8 522 aa10.93□□□□□ -0.66
GCFC2-203ENST00000427862 FECHP22830 423 aa10.92□□□□□ -0.66
GCFC2-203ENST00000427862 PTGDRQ13258 359 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms