RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 YEATS2Q9ULM3 1422 aa16.85■□□□□ 0.29
HDLBP-213ENST00000427007 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
HDLBP-213ENST00000427007 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
HDLBP-213ENST00000427007 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-213ENST00000427007 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
HDLBP-213ENST00000427007 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
HDLBP-213ENST00000427007 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
HDLBP-213ENST00000427007 TROQ12816 1431 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-213ENST00000427007 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.28
HDLBP-213ENST00000427007 MLECQ14165 292 aa16.77■□□□□ 0.28
HDLBP-213ENST00000427007 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
HDLBP-213ENST00000427007 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
HDLBP-213ENST00000427007 CLIP1P30622 1438 aa16.77■□□□□ 0.27
HDLBP-213ENST00000427007 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.27
HDLBP-213ENST00000427007 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
HDLBP-213ENST00000427007 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
HDLBP-213ENST00000427007 ATP10AO60312 1499 aa16.72■□□□□ 0.27
HDLBP-213ENST00000427007 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
HDLBP-213ENST00000427007 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
HDLBP-213ENST00000427007 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
HDLBP-213ENST00000427007 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.27
HDLBP-213ENST00000427007 KDM5CP41229 1560 aa16.71■□□□□ 0.27
HDLBP-213ENST00000427007 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
HDLBP-213ENST00000427007 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
HDLBP-213ENST00000427007 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
HDLBP-213ENST00000427007 HSPA2P54652 639 aa16.68■□□□□ 0.26
HDLBP-213ENST00000427007 DIP2CQ9Y2E4 1556 aa16.68■□□□□ 0.26
HDLBP-213ENST00000427007 ITSN2Q9NZM3 1697 aa16.67■□□□□ 0.26
HDLBP-213ENST00000427007 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
HDLBP-213ENST00000427007 ABCA6Q8N139 1617 aa16.67■□□□□ 0.26
HDLBP-213ENST00000427007 ABCC1P33527 1531 aa16.66■□□□□ 0.26
HDLBP-213ENST00000427007 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
HDLBP-213ENST00000427007 TRAPPC8Q9Y2L5 1435 aa16.63■□□□□ 0.25
HDLBP-213ENST00000427007 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
HDLBP-213ENST00000427007 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
HDLBP-213ENST00000427007 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
HDLBP-213ENST00000427007 REREQ9P2R6 1566 aa16.61■□□□□ 0.25
HDLBP-213ENST00000427007 CEBPAP49715 358 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-213ENST00000427007 KIDINS220Q9ULH0 1771 aa16.6■□□□□ 0.25
HDLBP-213ENST00000427007 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
HDLBP-213ENST00000427007 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
HDLBP-213ENST00000427007 C3P01024 1663 aa16.56■□□□□ 0.24
HDLBP-213ENST00000427007 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
HDLBP-213ENST00000427007 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
HDLBP-213ENST00000427007 AGLP35573 1532 aa16.55■□□□□ 0.24
HDLBP-213ENST00000427007 UHRF1BP1Q6BDS2 1440 aa16.52■□□□□ 0.23
HDLBP-213ENST00000427007 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
HDLBP-213ENST00000427007 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.231e-10■□□□□ 10.4
HDLBP-213ENST00000427007 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
HDLBP-213ENST00000427007 STRCQ7RTU9 1775 aa16.51■□□□□ 0.23
HDLBP-213ENST00000427007 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
HDLBP-213ENST00000427007 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
HDLBP-213ENST00000427007 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-213ENST00000427007 ATP7AQ04656 1500 aa16.49■□□□□ 0.23
HDLBP-213ENST00000427007 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
HDLBP-213ENST00000427007 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
HDLBP-213ENST00000427007 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
HDLBP-213ENST00000427007 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
HDLBP-213ENST00000427007 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
HDLBP-213ENST00000427007 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
HDLBP-213ENST00000427007 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
HDLBP-213ENST00000427007 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
HDLBP-213ENST00000427007 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
HDLBP-213ENST00000427007 MROH2AA6NES4 1674 aa16.45■□□□□ 0.22
HDLBP-213ENST00000427007 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
HDLBP-213ENST00000427007 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
HDLBP-213ENST00000427007 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
HDLBP-213ENST00000427007 A2MP01023 1474 aa16.42■□□□□ 0.22
HDLBP-213ENST00000427007 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-213ENST00000427007 ADGBQ8N7X0 1667 aa16.41■□□□□ 0.22
HDLBP-213ENST00000427007 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
HDLBP-213ENST00000427007 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
HDLBP-213ENST00000427007 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
HDLBP-213ENST00000427007 GGT6Q6P531 493 aa16.38■□□□□ 0.21
HDLBP-213ENST00000427007 NPATQ14207 1427 aa16.36■□□□□ 0.21
HDLBP-213ENST00000427007 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
HDLBP-213ENST00000427007 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
HDLBP-213ENST00000427007 PTPRTO14522 1441 aa16.36■□□□□ 0.21
HDLBP-213ENST00000427007 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
HDLBP-213ENST00000427007 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
HDLBP-213ENST00000427007 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
HDLBP-213ENST00000427007 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-213ENST00000427007 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
HDLBP-213ENST00000427007 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
HDLBP-213ENST00000427007 PTPRKQ15262 1439 aa16.31■□□□□ 0.2
HDLBP-213ENST00000427007 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-213ENST00000427007 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
HDLBP-213ENST00000427007 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
HDLBP-213ENST00000427007 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
HDLBP-213ENST00000427007 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
HDLBP-213ENST00000427007 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
HDLBP-213ENST00000427007 KIF3BO15066 747 aa16.26■□□□□ 0.19
HDLBP-213ENST00000427007 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
HDLBP-213ENST00000427007 LRRC9Q6ZRR7 1453 aa16.26■□□□□ 0.19
HDLBP-213ENST00000427007 ARHGEF5Q12774 1597 aa16.26■□□□□ 0.19
HDLBP-213ENST00000427007 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
HDLBP-213ENST00000427007 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
HDLBP-213ENST00000427007 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
HDLBP-213ENST00000427007 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
HDLBP-213ENST00000427007 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms