RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 LMTK3Q96Q04 1460 aa32.7■■■□□ 2.83
CCDC107-206ENST00000426546 TROQ12816 1431 aaPredicted RBP32.68■■■□□ 2.82
CCDC107-206ENST00000426546 FBXO41Q8TF61 875 aa32.67■■■□□ 2.82
CCDC107-206ENST00000426546 CASKIN1Q8WXD9 1431 aa32.67■■■□□ 2.82
CCDC107-206ENST00000426546 YEATS2Q9ULM3 1422 aa32.67■■■□□ 2.82
CCDC107-206ENST00000426546 ZFYVE16Q7Z3T8 1539 aa32.66■■■□□ 2.82
CCDC107-206ENST00000426546 SIGLEC1Q9BZZ2 1709 aa32.65■■■□□ 2.82
CCDC107-206ENST00000426546 CLIP1P30622 1438 aa32.65■■■□□ 2.82
CCDC107-206ENST00000426546 CCDC18Q5T9S5 1454 aa32.64■■■□□ 2.82
CCDC107-206ENST00000426546 MAGI2Q86UL8 1455 aa32.62■■■□□ 2.81
CCDC107-206ENST00000426546 POGZQ7Z3K3 1410 aa32.61■■■□□ 2.81
CCDC107-206ENST00000426546 FYCO1Q9BQS8 1478 aa32.59■■■□□ 2.81
CCDC107-206ENST00000426546 SCAPERQ9BY12 1400 aa32.59■■■□□ 2.81
CCDC107-206ENST00000426546 EFCAB2Q5VUJ9 269 aa32.56■■■□□ 2.8
CCDC107-206ENST00000426546 ARHGAP5Q13017 1502 aa32.51■■■□□ 2.8
CCDC107-206ENST00000426546 HSPA2P54652 639 aa32.5■■■□□ 2.79
CCDC107-206ENST00000426546 PLPPR3Q6T4P5 718 aa32.5■■■□□ 2.79
CCDC107-206ENST00000426546 MLECQ14165 292 aa32.49■■■□□ 2.79
CCDC107-206ENST00000426546 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
CCDC107-206ENST00000426546 FER1L4A9Z1Z3 1794 aa32.47■■■□□ 2.79
CCDC107-206ENST00000426546 PREX2Q70Z35 1606 aa32.47■■■□□ 2.79
CCDC107-206ENST00000426546 ATP10AO60312 1499 aa32.45■■■□□ 2.79
CCDC107-206ENST00000426546 ZNF518AQ6AHZ1 1483 aa32.44■■■□□ 2.78
CCDC107-206ENST00000426546 C9orf84Q5VXU9 1444 aa32.42■■■□□ 2.78
CCDC107-206ENST00000426546 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
CCDC107-206ENST00000426546 KDM5CP41229 1560 aa32.41■■■□□ 2.78
CCDC107-206ENST00000426546 CDC42BPAQ5VT25 1732 aa32.38■■■□□ 2.77
CCDC107-206ENST00000426546 ABCC1P33527 1531 aa32.34■■■□□ 2.77
CCDC107-206ENST00000426546 ITSN2Q9NZM3 1697 aa32.31■■■□□ 2.76
CCDC107-206ENST00000426546 AFAP1Q8N556 730 aa32.31■■■□□ 2.76
CCDC107-206ENST00000426546 CEP162Q5TB80 1403 aa32.28■■■□□ 2.76
CCDC107-206ENST00000426546 PREX1Q8TCU6 1659 aa32.27■■■□□ 2.76
CCDC107-206ENST00000426546 CEBPAP49715 358 aaPredicted RBP32.26■■■□□ 2.75
CCDC107-206ENST00000426546 MLH3Q9UHC1 1453 aa32.26■■■□□ 2.75
CCDC107-206ENST00000426546 DIP2CQ9Y2E4 1556 aa32.25■■■□□ 2.75
CCDC107-206ENST00000426546 REREQ9P2R6 1566 aa32.24■■■□□ 2.75
CCDC107-206ENST00000426546 TRAPPC8Q9Y2L5 1435 aa32.23■■■□□ 2.75
CCDC107-206ENST00000426546 GPATCH8Q9UKJ3 1502 aaKnown RBP32.22■■■□□ 2.75
CCDC107-206ENST00000426546 ABCA6Q8N139 1617 aa32.22■■■□□ 2.75
CCDC107-206ENST00000426546 CERKQ8TCT0 537 aa32.21■■■□□ 2.75
CCDC107-206ENST00000426546 SAMD9LQ8IVG5 1584 aa32.2■■■□□ 2.75
CCDC107-206ENST00000426546 MTUS2Q5JR59 1369 aa32.19■■■□□ 2.74
CCDC107-206ENST00000426546 MYT1LQ9UL68 1186 aa32.19■■■□□ 2.74
CCDC107-206ENST00000426546 EHBP1L1Q8N3D4 1523 aa32.16■■■□□ 2.74
CCDC107-206ENST00000426546 KIDINS220Q9ULH0 1771 aa32.15■■■□□ 2.74
CCDC107-206ENST00000426546 SYCP2Q9BX26 1530 aa32.14■■■□□ 2.74
CCDC107-206ENST00000426546 CCNB3Q8WWL7 1395 aa32.13■■■□□ 2.73
CCDC107-206ENST00000426546 AGLP35573 1532 aa32.11■■■□□ 2.73
CCDC107-206ENST00000426546 UHRF1BP1Q6BDS2 1440 aa32.11■■■□□ 2.73
CCDC107-206ENST00000426546 SETD1BQ9UPS6 1966 aaKnown RBP32.11■■■□□ 2.73
CCDC107-206ENST00000426546 STRCQ7RTU9 1775 aa32.11■■■□□ 2.73
CCDC107-206ENST00000426546 PLEKHH2Q8IVE3 1493 aa32.1■■■□□ 2.73
CCDC107-206ENST00000426546 ZNF777Q9ULD5 760 aaPredicted RBP32.1■■■□□ 2.73
CCDC107-206ENST00000426546 KIAA1107Q9UPP5 1409 aa32.09■■■□□ 2.73
CCDC107-206ENST00000426546 CFDP1Q9UEE9 299 aaPredicted RBP32.08■■■□□ 2.73
CCDC107-206ENST00000426546 C3P01024 1663 aa32.08■■■□□ 2.73
CCDC107-206ENST00000426546 TIAM1Q13009 1591 aa32.07■■■□□ 2.72
CCDC107-206ENST00000426546 DMRT2Q9Y5R5 561 aa32.03■■■□□ 2.72
CCDC107-206ENST00000426546 HNRNPMP52272 730 aaKnown RBP eCLIP32.01■■■□□ 2.71
CCDC107-206ENST00000426546 INO80Q9ULG1 1556 aaPredicted RBP32■■■□□ 2.71
CCDC107-206ENST00000426546 SPAG9O60271 1321 aaKnown RBP32■■■□□ 2.71
CCDC107-206ENST00000426546 ATP7AQ04656 1500 aa31.99■■■□□ 2.71
CCDC107-206ENST00000426546 ESF1Q9H501 851 aaKnown RBP31.98■■■□□ 2.71
CCDC107-206ENST00000426546 SUPT6HQ7KZ85 1726 aaKnown RBP31.97■■■□□ 2.71
CCDC107-206ENST00000426546 LOC105371045A0A1W2PR82 267 aa31.96■■■□□ 2.71
CCDC107-206ENST00000426546 VPS8Q8N3P4 1428 aa31.95■■■□□ 2.71
CCDC107-206ENST00000426546 CNTLNQ9NXG0 1405 aa31.94■■■□□ 2.7
CCDC107-206ENST00000426546 PTPRTO14522 1441 aa31.92■■■□□ 2.7
CCDC107-206ENST00000426546 NCOA2Q15596 1464 aa31.91■■■□□ 2.7
CCDC107-206ENST00000426546 PLXNC1O60486 1568 aa31.9■■■□□ 2.7
CCDC107-206ENST00000426546 ZNF644Q9H582 1327 aaPredicted RBP31.88■■■□□ 2.69
CCDC107-206ENST00000426546 MBD5Q9P267 1494 aa31.88■■■□□ 2.69
CCDC107-206ENST00000426546 ADGBQ8N7X0 1667 aa31.86■■■□□ 2.69
CCDC107-206ENST00000426546 MROH2AA6NES4 1674 aa31.86■■■□□ 2.69
CCDC107-206ENST00000426546 A2MP01023 1474 aa31.85■■■□□ 2.69
CCDC107-206ENST00000426546 NPATQ14207 1427 aa31.83■■■□□ 2.69
CCDC107-206ENST00000426546 NCOA1Q15788 1441 aa31.83■■■□□ 2.69
CCDC107-206ENST00000426546 LRRC9Q6ZRR7 1453 aa31.81■■■□□ 2.68
CCDC107-206ENST00000426546 RTEL1-TNFRSF6BF6WH68 1400 aa31.81■■■□□ 2.68
CCDC107-206ENST00000426546 ZMYM3Q14202 1370 aa31.81■■■□□ 2.68
CCDC107-206ENST00000426546 MAP3K1Q13233 1512 aa31.8■■■□□ 2.68
CCDC107-206ENST00000426546 CAMSAP2Q08AD1 1489 aa31.8■■■□□ 2.68
CCDC107-206ENST00000426546 LTBP4Q8N2S1 1624 aa31.79■■■□□ 2.68
CCDC107-206ENST00000426546 CCDC141Q6ZP82 1450 aa31.77■■■□□ 2.68
CCDC107-206ENST00000426546 CAMSAP1Q5T5Y3 1602 aa31.75■■■□□ 2.67
CCDC107-206ENST00000426546 CLTCQ00610 1675 aaKnown RBP31.73■■■□□ 2.67
CCDC107-206ENST00000426546 ARHGEF5Q12774 1597 aa31.72■■■□□ 2.67
CCDC107-206ENST00000426546 RSPH4AQ5TD94 716 aa31.71■■■□□ 2.67
CCDC107-206ENST00000426546 IQSEC2Q5JU85 1478 aa31.67■■■□□ 2.66
CCDC107-206ENST00000426546 DHX29Q7Z478 1369 aaKnown RBP31.67■■■□□ 2.66
CCDC107-206ENST00000426546 PTPRKQ15262 1439 aa31.66■■■□□ 2.66
CCDC107-206ENST00000426546 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
CCDC107-206ENST00000426546 ZNF142P52746 1687 aaPredicted RBP31.66■■■□□ 2.66
CCDC107-206ENST00000426546 DISP3Q9P2K9 1392 aa31.66■■■□□ 2.66
CCDC107-206ENST00000426546 GGT6Q6P531 493 aa31.65■■■□□ 2.66
CCDC107-206ENST00000426546 PPP6R1Q9UPN7 881 aa31.65■■■□□ 2.66
CCDC107-206ENST00000426546 KANK4Q5T7N3 995 aaPredicted RBP31.64■■■□□ 2.66
CCDC107-206ENST00000426546 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
CCDC107-206ENST00000426546 CEP170BQ9Y4F5 1589 aaPredicted RBP31.6■■■□□ 2.65
CCDC107-206ENST00000426546 PLA2R1Q13018 1463 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms