RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
LINC01006-203ENST00000425712 CDC42BPBQ9Y5S2 1711 aa14.54□□□□□ -0.08
LINC01006-203ENST00000425712 TEX14Q8IWB6 1497 aa14.52□□□□□ -0.08
LINC01006-203ENST00000425712 RRBP1Q9P2E9 1410 aaKnown RBP14.52□□□□□ -0.08
LINC01006-203ENST00000425712 PTPN23Q9H3S7 1636 aa14.52□□□□□ -0.09
LINC01006-203ENST00000425712 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
LINC01006-203ENST00000425712 FANCAO15360 1455 aa14.5□□□□□ -0.09
LINC01006-203ENST00000425712 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
LINC01006-203ENST00000425712 CAMSAP2Q08AD1 1489 aa14.5□□□□□ -0.09
LINC01006-203ENST00000425712 PLEKHH2Q8IVE3 1493 aa14.5□□□□□ -0.09
LINC01006-203ENST00000425712 NEO1Q92859 1461 aa14.5□□□□□ -0.09
LINC01006-203ENST00000425712 SAMD9LQ8IVG5 1584 aa14.49□□□□□ -0.09
LINC01006-203ENST00000425712 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
LINC01006-203ENST00000425712 EFCAB2Q5VUJ9 269 aa14.48□□□□□ -0.09
LINC01006-203ENST00000425712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
LINC01006-203ENST00000425712 ABCC1P33527 1531 aa14.47□□□□□ -0.09
LINC01006-203ENST00000425712 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
LINC01006-203ENST00000425712 TSPOAP1O95153 1857 aa14.46□□□□□ -0.1
LINC01006-203ENST00000425712 ADGRL1O94910 1474 aa14.44□□□□□ -0.1
LINC01006-203ENST00000425712 ARHGEF5Q12774 1597 aa14.44□□□□□ -0.1
LINC01006-203ENST00000425712 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
LINC01006-203ENST00000425712 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
LINC01006-203ENST00000425712 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
LINC01006-203ENST00000425712 ZNF777Q9ULD5 760 aaPredicted RBP14.43□□□□□ -0.1
LINC01006-203ENST00000425712 DNMT1P26358 1616 aaKnown RBP14.42□□□□□ -0.1
LINC01006-203ENST00000425712 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
LINC01006-203ENST00000425712 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
LINC01006-203ENST00000425712 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
LINC01006-203ENST00000425712 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
LINC01006-203ENST00000425712 SHANK2Q9UPX8 1470 aa14.39□□□□□ -0.11
LINC01006-203ENST00000425712 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
LINC01006-203ENST00000425712 ZNF644Q9H582 1327 aaPredicted RBP14.39□□□□□ -0.11
LINC01006-203ENST00000425712 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
LINC01006-203ENST00000425712 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
LINC01006-203ENST00000425712 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
LINC01006-203ENST00000425712 DAPK1P53355 1430 aa14.38□□□□□ -0.11
LINC01006-203ENST00000425712 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
LINC01006-203ENST00000425712 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
LINC01006-203ENST00000425712 ARHGEF12Q9NZN5 1544 aa14.37□□□□□ -0.11
LINC01006-203ENST00000425712 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
LINC01006-203ENST00000425712 RICTORQ6R327 1708 aa14.35□□□□□ -0.11
LINC01006-203ENST00000425712 KDM5CP41229 1560 aa14.35□□□□□ -0.11
LINC01006-203ENST00000425712 ABCC5O15440 1437 aa14.35□□□□□ -0.11
LINC01006-203ENST00000425712 ADGBQ8N7X0 1667 aa14.35□□□□□ -0.11
LINC01006-203ENST00000425712 TRAPPC8Q9Y2L5 1435 aa14.33□□□□□ -0.11
LINC01006-203ENST00000425712 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.12
LINC01006-203ENST00000425712 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC01006-203ENST00000425712 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.12
LINC01006-203ENST00000425712 HECW2Q9P2P5 1572 aa14.33□□□□□ -0.12
LINC01006-203ENST00000425712 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
LINC01006-203ENST00000425712 KDM6BO15054 1643 aa14.33□□□□□ -0.12
LINC01006-203ENST00000425712 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
LINC01006-203ENST00000425712 ZFYVE16Q7Z3T8 1539 aa14.32□□□□□ -0.12
LINC01006-203ENST00000425712 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
LINC01006-203ENST00000425712 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
LINC01006-203ENST00000425712 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
LINC01006-203ENST00000425712 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
LINC01006-203ENST00000425712 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
LINC01006-203ENST00000425712 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
LINC01006-203ENST00000425712 MLH3Q9UHC1 1453 aa14.3□□□□□ -0.12
LINC01006-203ENST00000425712 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
LINC01006-203ENST00000425712 ROCK1Q13464 1354 aa14.29□□□□□ -0.12
LINC01006-203ENST00000425712 MAGI2Q86UL8 1455 aa14.29□□□□□ -0.12
LINC01006-203ENST00000425712 ITGAEP38570 1179 aa14.28□□□□□ -0.12
LINC01006-203ENST00000425712 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
LINC01006-203ENST00000425712 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.12
LINC01006-203ENST00000425712 GCC2Q8IWJ2 1684 aa14.26□□□□□ -0.13
LINC01006-203ENST00000425712 COL17A1Q9UMD9 1497 aaPredicted RBP14.26□□□□□ -0.13
LINC01006-203ENST00000425712 AFAP1Q8N556 730 aa14.26□□□□□ -0.13
LINC01006-203ENST00000425712 KIDINS220Q9ULH0 1771 aa14.26□□□□□ -0.13
LINC01006-203ENST00000425712 ARHGEF40Q8TER5 1519 aa14.25□□□□□ -0.13
LINC01006-203ENST00000425712 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
LINC01006-203ENST00000425712 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
LINC01006-203ENST00000425712 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
LINC01006-203ENST00000425712 ABCA6Q8N139 1617 aa14.23□□□□□ -0.13
LINC01006-203ENST00000425712 DIP2CQ9Y2E4 1556 aa14.23□□□□□ -0.13
LINC01006-203ENST00000425712 DUOX2Q9NRD8 1548 aa14.23□□□□□ -0.13
LINC01006-203ENST00000425712 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
LINC01006-203ENST00000425712 CHIC2Q9UKJ5 165 aa14.22□□□□□ -0.13
LINC01006-203ENST00000425712 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
LINC01006-203ENST00000425712 REREQ9P2R6 1566 aa14.21□□□□□ -0.14
LINC01006-203ENST00000425712 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
LINC01006-203ENST00000425712 NAIPQ13075 1403 aa14.2□□□□□ -0.14
LINC01006-203ENST00000425712 ERBINQ96RT1 1412 aa14.2□□□□□ -0.14
LINC01006-203ENST00000425712 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
LINC01006-203ENST00000425712 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
LINC01006-203ENST00000425712 A2MP01023 1474 aa14.18□□□□□ -0.14
LINC01006-203ENST00000425712 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
LINC01006-203ENST00000425712 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
LINC01006-203ENST00000425712 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
LINC01006-203ENST00000425712 ATP10AO60312 1499 aa14.17□□□□□ -0.14
LINC01006-203ENST00000425712 DHX29Q7Z478 1369 aaKnown RBP14.16□□□□□ -0.14
LINC01006-203ENST00000425712 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
LINC01006-203ENST00000425712 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
LINC01006-203ENST00000425712 AGLP35573 1532 aa14.14□□□□□ -0.15
LINC01006-203ENST00000425712 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
LINC01006-203ENST00000425712 UNC13BO14795 1591 aa14.12□□□□□ -0.15
LINC01006-203ENST00000425712 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
LINC01006-203ENST00000425712 RNF17Q9BXT8 1623 aaKnown RBP14.12□□□□□ -0.15
LINC01006-203ENST00000425712 HRCP23327 699 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms