RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 SAMD9LQ8IVG5 1584 aa11.46□□□□□ -0.57
PRDM1-204ENST00000424894 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.57
PRDM1-204ENST00000424894 YEATS2Q9ULM3 1422 aa11.46□□□□□ -0.57
PRDM1-204ENST00000424894 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
PRDM1-204ENST00000424894 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
PRDM1-204ENST00000424894 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
PRDM1-204ENST00000424894 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
PRDM1-204ENST00000424894 ABCC1P33527 1531 aa11.44□□□□□ -0.58
PRDM1-204ENST00000424894 ZMYM4Q5VZL5 1548 aa11.44□□□□□ -0.58
PRDM1-204ENST00000424894 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
PRDM1-204ENST00000424894 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
PRDM1-204ENST00000424894 MADDQ8WXG6 1647 aa11.43□□□□□ -0.58
PRDM1-204ENST00000424894 ZFYVE16Q7Z3T8 1539 aa11.43□□□□□ -0.58
PRDM1-204ENST00000424894 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
PRDM1-204ENST00000424894 RIMS1Q86UR5 1692 aaKnown RBP11.43□□□□□ -0.58
PRDM1-204ENST00000424894 EHBP1L1Q8N3D4 1523 aa11.42□□□□□ -0.58
PRDM1-204ENST00000424894 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
PRDM1-204ENST00000424894 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-204ENST00000424894 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
PRDM1-204ENST00000424894 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
PRDM1-204ENST00000424894 ADAMTSL3P82987 1691 aa11.41□□□□□ -0.58
PRDM1-204ENST00000424894 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.58
PRDM1-204ENST00000424894 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
PRDM1-204ENST00000424894 KIDINS220Q9ULH0 1771 aa11.4□□□□□ -0.58
PRDM1-204ENST00000424894 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.58
PRDM1-204ENST00000424894 KDM5CP41229 1560 aa11.4□□□□□ -0.58
PRDM1-204ENST00000424894 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
PRDM1-204ENST00000424894 DIP2CQ9Y2E4 1556 aa11.4□□□□□ -0.58
PRDM1-204ENST00000424894 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.59
PRDM1-204ENST00000424894 AFAP1Q8N556 730 aa11.39□□□□□ -0.59
PRDM1-204ENST00000424894 FER1L4A9Z1Z3 1794 aa11.39□□□□□ -0.59
PRDM1-204ENST00000424894 EFCAB2Q5VUJ9 269 aa11.38□□□□□ -0.59
PRDM1-204ENST00000424894 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
PRDM1-204ENST00000424894 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
PRDM1-204ENST00000424894 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
PRDM1-204ENST00000424894 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
PRDM1-204ENST00000424894 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
PRDM1-204ENST00000424894 MLECQ14165 292 aa11.35□□□□□ -0.59
PRDM1-204ENST00000424894 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
PRDM1-204ENST00000424894 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
PRDM1-204ENST00000424894 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
PRDM1-204ENST00000424894 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
PRDM1-204ENST00000424894 INO80Q9ULG1 1556 aaPredicted RBP11.34□□□□□ -0.59
PRDM1-204ENST00000424894 HNRNPMP52272 730 aaKnown RBP eCLIP11.34□□□□□ -0.59
PRDM1-204ENST00000424894 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.6
PRDM1-204ENST00000424894 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
PRDM1-204ENST00000424894 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
PRDM1-204ENST00000424894 ATP10AO60312 1499 aa11.31□□□□□ -0.6
PRDM1-204ENST00000424894 PTPRMP28827 1452 aa11.31□□□□□ -0.6
PRDM1-204ENST00000424894 ATP7AQ04656 1500 aa11.3□□□□□ -0.6
PRDM1-204ENST00000424894 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
PRDM1-204ENST00000424894 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
PRDM1-204ENST00000424894 MAGI2Q86UL8 1455 aa11.3□□□□□ -0.6
PRDM1-204ENST00000424894 MLH3Q9UHC1 1453 aa11.28□□□□□ -0.6
PRDM1-204ENST00000424894 C3P01024 1663 aa11.27□□□□□ -0.6
PRDM1-204ENST00000424894 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
PRDM1-204ENST00000424894 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
PRDM1-204ENST00000424894 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.61
PRDM1-204ENST00000424894 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
PRDM1-204ENST00000424894 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
PRDM1-204ENST00000424894 REREQ9P2R6 1566 aa11.26□□□□□ -0.61
PRDM1-204ENST00000424894 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
PRDM1-204ENST00000424894 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
PRDM1-204ENST00000424894 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
PRDM1-204ENST00000424894 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
PRDM1-204ENST00000424894 MYOM3Q5VTT5 1437 aa11.23□□□□□ -0.61
PRDM1-204ENST00000424894 KIAA1107Q9UPP5 1409 aa11.23□□□□□ -0.61
PRDM1-204ENST00000424894 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
PRDM1-204ENST00000424894 ARHGEF5Q12774 1597 aa11.22□□□□□ -0.61
PRDM1-204ENST00000424894 CCDC141Q6ZP82 1450 aa11.22□□□□□ -0.61
PRDM1-204ENST00000424894 A2MP01023 1474 aa11.2□□□□□ -0.62
PRDM1-204ENST00000424894 LMTK3Q96Q04 1460 aa11.2□□□□□ -0.62
PRDM1-204ENST00000424894 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
PRDM1-204ENST00000424894 AGLP35573 1532 aa11.19□□□□□ -0.62
PRDM1-204ENST00000424894 CEP152O94986 1710 aa11.18□□□□□ -0.62
PRDM1-204ENST00000424894 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
PRDM1-204ENST00000424894 MAST1Q9Y2H9 1570 aa11.17□□□□□ -0.62
PRDM1-204ENST00000424894 HSPA2P54652 639 aa11.17□□□□□ -0.62
PRDM1-204ENST00000424894 APLP2Q06481 763 aa11.17□□□□□ -0.62
PRDM1-204ENST00000424894 MROH2AA6NES4 1674 aa11.17□□□□□ -0.62
PRDM1-204ENST00000424894 FGD6Q6ZV73 1430 aa11.17□□□□□ -0.62
PRDM1-204ENST00000424894 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
PRDM1-204ENST00000424894 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
PRDM1-204ENST00000424894 GGT6Q6P531 493 aa11.14□□□□□ -0.63
PRDM1-204ENST00000424894 ABCC5O15440 1437 aa11.14□□□□□ -0.63
PRDM1-204ENST00000424894 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
PRDM1-204ENST00000424894 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
PRDM1-204ENST00000424894 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
PRDM1-204ENST00000424894 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
PRDM1-204ENST00000424894 RTEL1-TNFRSF6BF6WH68 1400 aa11.12□□□□□ -0.63
PRDM1-204ENST00000424894 DAPK1P53355 1430 aa11.12□□□□□ -0.63
PRDM1-204ENST00000424894 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
PRDM1-204ENST00000424894 RNF17Q9BXT8 1623 aaKnown RBP11.12□□□□□ -0.63
PRDM1-204ENST00000424894 DHX29Q7Z478 1369 aaKnown RBP11.11□□□□□ -0.63
PRDM1-204ENST00000424894 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
PRDM1-204ENST00000424894 KIF3BO15066 747 aa11.1□□□□□ -0.63
PRDM1-204ENST00000424894 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
PRDM1-204ENST00000424894 CAMSAP1Q5T5Y3 1602 aa11.09□□□□□ -0.63
PRDM1-204ENST00000424894 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
PRDM1-204ENST00000424894 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms