RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
TRBV22-1-201ENST00000424543 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
TRBV22-1-201ENST00000424543 PLCH2O75038 1416 aa19.31■□□□□ 0.68
TRBV22-1-201ENST00000424543 POGZQ7Z3K3 1410 aa19.31■□□□□ 0.68
TRBV22-1-201ENST00000424543 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
TRBV22-1-201ENST00000424543 FER1L4A9Z1Z3 1794 aa19.3■□□□□ 0.68
TRBV22-1-201ENST00000424543 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
TRBV22-1-201ENST00000424543 MLECQ14165 292 aa19.27■□□□□ 0.68
TRBV22-1-201ENST00000424543 CDC42BPBQ9Y5S2 1711 aa19.27■□□□□ 0.68
TRBV22-1-201ENST00000424543 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
TRBV22-1-201ENST00000424543 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
TRBV22-1-201ENST00000424543 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
TRBV22-1-201ENST00000424543 PREX2Q70Z35 1606 aa19.21■□□□□ 0.67
TRBV22-1-201ENST00000424543 CLIP1P30622 1438 aa19.2■□□□□ 0.66
TRBV22-1-201ENST00000424543 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
TRBV22-1-201ENST00000424543 HSPA2P54652 639 aa19.19■□□□□ 0.66
TRBV22-1-201ENST00000424543 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
TRBV22-1-201ENST00000424543 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
TRBV22-1-201ENST00000424543 KDM5CP41229 1560 aa19.19■□□□□ 0.66
TRBV22-1-201ENST00000424543 C9orf84Q5VXU9 1444 aa19.18■□□□□ 0.66
TRBV22-1-201ENST00000424543 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
TRBV22-1-201ENST00000424543 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
TRBV22-1-201ENST00000424543 ATP10AO60312 1499 aa19.17■□□□□ 0.66
TRBV22-1-201ENST00000424543 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
TRBV22-1-201ENST00000424543 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
TRBV22-1-201ENST00000424543 ARHGEF12Q9NZN5 1544 aa19.16■□□□□ 0.66
TRBV22-1-201ENST00000424543 AFAP1Q8N556 730 aa19.16■□□□□ 0.66
TRBV22-1-201ENST00000424543 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
TRBV22-1-201ENST00000424543 ABCC1P33527 1531 aa19.15■□□□□ 0.66
TRBV22-1-201ENST00000424543 CCDC18Q5T9S5 1454 aa19.14■□□□□ 0.65
TRBV22-1-201ENST00000424543 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
TRBV22-1-201ENST00000424543 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
TRBV22-1-201ENST00000424543 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
TRBV22-1-201ENST00000424543 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
TRBV22-1-201ENST00000424543 PREX1Q8TCU6 1659 aa19.1■□□□□ 0.65
TRBV22-1-201ENST00000424543 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
TRBV22-1-201ENST00000424543 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
TRBV22-1-201ENST00000424543 C3P01024 1663 aa19.06■□□□□ 0.64
TRBV22-1-201ENST00000424543 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
TRBV22-1-201ENST00000424543 SYCP2Q9BX26 1530 aa19.05■□□□□ 0.64
TRBV22-1-201ENST00000424543 MLH3Q9UHC1 1453 aa19.04■□□□□ 0.64
TRBV22-1-201ENST00000424543 FBXO41Q8TF61 875 aa19.04■□□□□ 0.64
TRBV22-1-201ENST00000424543 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
TRBV22-1-201ENST00000424543 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
TRBV22-1-201ENST00000424543 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
TRBV22-1-201ENST00000424543 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
TRBV22-1-201ENST00000424543 AGLP35573 1532 aa18.98■□□□□ 0.63
TRBV22-1-201ENST00000424543 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
TRBV22-1-201ENST00000424543 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRBV22-1-201ENST00000424543 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
TRBV22-1-201ENST00000424543 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
TRBV22-1-201ENST00000424543 UHRF1BP1Q6BDS2 1440 aa18.93■□□□□ 0.62
TRBV22-1-201ENST00000424543 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
TRBV22-1-201ENST00000424543 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
TRBV22-1-201ENST00000424543 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
TRBV22-1-201ENST00000424543 CCNB3Q8WWL7 1395 aa18.91■□□□□ 0.62
TRBV22-1-201ENST00000424543 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
TRBV22-1-201ENST00000424543 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
TRBV22-1-201ENST00000424543 CFDP1Q9UEE9 299 aaPredicted RBP18.89■□□□□ 0.61
TRBV22-1-201ENST00000424543 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
TRBV22-1-201ENST00000424543 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
TRBV22-1-201ENST00000424543 PLXNC1O60486 1568 aa18.89■□□□□ 0.61
TRBV22-1-201ENST00000424543 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
TRBV22-1-201ENST00000424543 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
TRBV22-1-201ENST00000424543 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
TRBV22-1-201ENST00000424543 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
TRBV22-1-201ENST00000424543 A2MP01023 1474 aa18.84■□□□□ 0.61
TRBV22-1-201ENST00000424543 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
TRBV22-1-201ENST00000424543 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
TRBV22-1-201ENST00000424543 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.6
TRBV22-1-201ENST00000424543 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
TRBV22-1-201ENST00000424543 MBD5Q9P267 1494 aa18.8■□□□□ 0.6
TRBV22-1-201ENST00000424543 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
TRBV22-1-201ENST00000424543 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
TRBV22-1-201ENST00000424543 NCOA1Q15788 1441 aa18.78■□□□□ 0.6
TRBV22-1-201ENST00000424543 GGT6Q6P531 493 aa18.78■□□□□ 0.6
TRBV22-1-201ENST00000424543 NCOA2Q15596 1464 aa18.77■□□□□ 0.6
TRBV22-1-201ENST00000424543 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
TRBV22-1-201ENST00000424543 CAMSAP2Q08AD1 1489 aa18.77■□□□□ 0.59
TRBV22-1-201ENST00000424543 PTPRTO14522 1441 aa18.74■□□□□ 0.59
TRBV22-1-201ENST00000424543 NPATQ14207 1427 aa18.74■□□□□ 0.59
TRBV22-1-201ENST00000424543 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
TRBV22-1-201ENST00000424543 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
TRBV22-1-201ENST00000424543 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
TRBV22-1-201ENST00000424543 CEP170BQ9Y4F5 1589 aaPredicted RBP18.73■□□□□ 0.59
TRBV22-1-201ENST00000424543 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
TRBV22-1-201ENST00000424543 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
TRBV22-1-201ENST00000424543 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
TRBV22-1-201ENST00000424543 RTEL1-TNFRSF6BF6WH68 1400 aa18.67■□□□□ 0.58
TRBV22-1-201ENST00000424543 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
TRBV22-1-201ENST00000424543 DHX29Q7Z478 1369 aaKnown RBP18.66■□□□□ 0.58
TRBV22-1-201ENST00000424543 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
TRBV22-1-201ENST00000424543 ARHGEF5Q12774 1597 aa18.65■□□□□ 0.58
TRBV22-1-201ENST00000424543 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
TRBV22-1-201ENST00000424543 KIF3BO15066 747 aa18.65■□□□□ 0.58
TRBV22-1-201ENST00000424543 ZNF335Q9H4Z2 1342 aaPredicted RBP18.64■□□□□ 0.57
TRBV22-1-201ENST00000424543 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
TRBV22-1-201ENST00000424543 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
TRBV22-1-201ENST00000424543 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
TRBV22-1-201ENST00000424543 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms